RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 CEP128Q6ZU80 1094 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 ZNF720Q7Z2F6 126 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 TTC7BQ86TV6 843 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 UNC93AQ86WB7 457 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 CXorf67Q86X51 503 aaPredicted RBP6.52□□□□□ -1.37
HDAC3-206ENST00000471968 SMC5Q8IY18 1101 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 OR6K2Q8NGY2 324 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 TMEM125Q96AQ2 219 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 FCRL2Q96LA5 508 aaPredicted RBP6.52□□□□□ -1.37
HDAC3-206ENST00000471968 JAKMIP1Q96N16 626 aaKnown RBP6.52□□□□□ -1.37
HDAC3-206ENST00000471968 IP6K3Q96PC2 410 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 TWNKQ96RR1 684 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 DMRTA2Q96SC8 542 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 LGR4Q9BXB1 951 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 TBC1D10AQ9BXI6 508 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 AGXT2Q9BYV1 514 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 MUC3BQ9H195 1237 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 ST6GALNAC4Q9H4F1 302 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 GDPD2Q9HCC8 539 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 ATP13A2Q9NQ11 1180 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 DMRT3Q9NQL9 472 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 ABCC13Q9NSE7 274 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 P4HTMQ9NXG6 502 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 HECAQ9UBI9 543 aaPredicted RBP6.52□□□□□ -1.37
HDAC3-206ENST00000471968 EXOC7Q9UPT5 735 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 ZNF835Q9Y2P0 537 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 OR51B4Q9Y5P0 310 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 PCLOQ9Y6V0 5065 aa6.52□□□□□ -1.37
HDAC3-206ENST00000471968 RYR1P21817 5038 aa6.51□□□□□ -1.37
HDAC3-206ENST00000471968 TCAF2A6NFQ2 919 aa6.51□□□□□ -1.37
HDAC3-206ENST00000471968 A6NNC1 897 aa6.51□□□□□ -1.37
HDAC3-206ENST00000471968 E9PLN8 166 aa6.51□□□□□ -1.37
HDAC3-206ENST00000471968 F5H5T6 163 aa6.51□□□□□ -1.37
HDAC3-206ENST00000471968 ZNHIT1O43257 154 aa6.51□□□□□ -1.37
HDAC3-206ENST00000471968 LDB2O43679 373 aa6.51□□□□□ -1.37
HDAC3-206ENST00000471968 KIF1CO43896 1103 aaKnown RBP6.51□□□□□ -1.37
HDAC3-206ENST00000471968 KLK8O60259 260 aa6.51□□□□□ -1.37
HDAC3-206ENST00000471968 ZNF821O75541 412 aaPredicted RBP6.51□□□□□ -1.37
HDAC3-206ENST00000471968 SCRG1O75711 98 aa6.51□□□□□ -1.37
HDAC3-206ENST00000471968 IGHEP01854 428 aa6.51□□□□□ -1.37
HDAC3-206ENST00000471968 C9P02748 559 aa6.51□□□□□ -1.37
HDAC3-206ENST00000471968 LTFP02788 710 aa6.51□□□□□ -1.37
HDAC3-206ENST00000471968 CLCN6P51797 869 aa6.51□□□□□ -1.37
HDAC3-206ENST00000471968 EVCP57679 992 aa6.51□□□□□ -1.37
HDAC3-206ENST00000471968 PEX6Q13608 980 aa6.51□□□□□ -1.37
HDAC3-206ENST00000471968 SNTB1Q13884 538 aaKnown RBP6.51□□□□□ -1.37
HDAC3-206ENST00000471968 ZNF805Q5CZA5 627 aa6.51□□□□□ -1.37
HDAC3-206ENST00000471968 CARD16Q5EG05 197 aa6.51□□□□□ -1.37
HDAC3-206ENST00000471968 MSANTD2Q6P1R3 559 aa6.51□□□□□ -1.37
HDAC3-206ENST00000471968 NAPRTQ6XQN6 538 aa6.51□□□□□ -1.37
HDAC3-206ENST00000471968 TMEM126BQ8IUX1 230 aa6.51□□□□□ -1.37
HDAC3-206ENST00000471968 SYCP3Q8IZU3 236 aa6.51□□□□□ -1.37
HDAC3-206ENST00000471968 PLD6Q8N2A8 252 aaKnown RBP6.51□□□□□ -1.37
HDAC3-206ENST00000471968 FBXL16Q8N461 479 aa6.51□□□□□ -1.37
HDAC3-206ENST00000471968 RYBPQ8N488 228 aaPredicted RBP6.51□□□□□ -1.37
HDAC3-206ENST00000471968 SLC38A9Q8NBW4 561 aa6.51□□□□□ -1.37
HDAC3-206ENST00000471968 LILRB4Q8NHJ6 448 aa6.51□□□□□ -1.37
HDAC3-206ENST00000471968 PTCD2Q8WV60 388 aaKnown RBP6.51□□□□□ -1.37
HDAC3-206ENST00000471968 IPO9Q96P70 1041 aaKnown RBP6.51□□□□□ -1.37
HDAC3-206ENST00000471968 PSMB7Q99436 277 aa6.51□□□□□ -1.37
HDAC3-206ENST00000471968 VKORC1Q9BQB6 163 aa6.51□□□□□ -1.37
HDAC3-206ENST00000471968 ESYT1Q9BSJ8 1104 aa6.51□□□□□ -1.37
HDAC3-206ENST00000471968 TRNAU1APQ9NX07 287 aaKnown RBP6.51□□□□□ -1.37
HDAC3-206ENST00000471968 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.51□□□□□ -1.37
HDAC3-206ENST00000471968 MEN1O00255 615 aa6.5□□□□□ -1.37
HDAC3-206ENST00000471968 ADAM10O14672 748 aa6.5□□□□□ -1.37
HDAC3-206ENST00000471968 TOX3O15405 576 aaPredicted RBP6.5□□□□□ -1.37
HDAC3-206ENST00000471968 BUB1BO60566 1050 aaPredicted RBP6.5□□□□□ -1.37
HDAC3-206ENST00000471968 ALOX12BO75342 701 aa6.5□□□□□ -1.37
HDAC3-206ENST00000471968 PMPCBO75439 489 aa6.5□□□□□ -1.37
HDAC3-206ENST00000471968 CDKL5O76039 1030 aa6.5□□□□□ -1.37
HDAC3-206ENST00000471968 RASAL1O95294 804 aa6.5□□□□□ -1.37
HDAC3-206ENST00000471968 FUCA1P04066 466 aa6.5□□□□□ -1.37
HDAC3-206ENST00000471968 UGT2B4P06133 528 aa6.5□□□□□ -1.37
HDAC3-206ENST00000471968 CAPN1P07384 714 aa6.5□□□□□ -1.37
HDAC3-206ENST00000471968 FOLR1P15328 257 aa6.5□□□□□ -1.37
HDAC3-206ENST00000471968 TYRP1P17643 537 aa6.5□□□□□ -1.37
HDAC3-206ENST00000471968 MX2P20592 715 aa6.5□□□□□ -1.37
HDAC3-206ENST00000471968 RPS6KB1P23443 525 aa6.5□□□□□ -1.37
HDAC3-206ENST00000471968 CHRNB4P30926 498 aa6.5□□□□□ -1.37
HDAC3-206ENST00000471968 EPHB1P54762 984 aa6.5□□□□□ -1.37
HDAC3-206ENST00000471968 EPHA4P54764 986 aa6.5□□□□□ -1.37
HDAC3-206ENST00000471968 ARG2P78540 354 aa6.5□□□□□ -1.37
HDAC3-206ENST00000471968 HNRNPUQ00839 825 aaKnown RBP eCLIP6.5□□□□□ -1.37
HDAC3-206ENST00000471968 ADIGQ0VDE8 80 aa6.5□□□□□ -1.37
HDAC3-206ENST00000471968 MYLK3Q32MK0 819 aa6.5□□□□□ -1.37
HDAC3-206ENST00000471968 CACHD1Q5VU97 1274 aa6.5□□□□□ -1.37
HDAC3-206ENST00000471968 IRAK1BP1Q5VVH5 260 aa6.5□□□□□ -1.37
HDAC3-206ENST00000471968 FAM198BQ6UWH4 519 aa6.5□□□□□ -1.37
HDAC3-206ENST00000471968 SFRP1Q8N474 314 aa6.5□□□□□ -1.37
HDAC3-206ENST00000471968 C4orf32Q8N8J7 132 aa6.5□□□□□ -1.37
HDAC3-206ENST00000471968 C3orf20Q8ND61 904 aa6.5□□□□□ -1.37
HDAC3-206ENST00000471968 ASB5Q8WWX0 329 aa6.5□□□□□ -1.37
HDAC3-206ENST00000471968 ZNF592Q92610 1267 aa6.5□□□□□ -1.37
HDAC3-206ENST00000471968 KLHL32Q96NJ5 620 aa6.5□□□□□ -1.37
HDAC3-206ENST00000471968 ACCSQ96QU6 501 aa6.5□□□□□ -1.37
HDAC3-206ENST00000471968 MAP3K3Q99759 626 aa6.5□□□□□ -1.37
HDAC3-206ENST00000471968 C2orf49Q9BVC5 232 aaPredicted RBP6.5□□□□□ -1.37
HDAC3-206ENST00000471968 TM6SF2Q9BZW4 377 aa6.5□□□□□ -1.37
HDAC3-206ENST00000471968 STN1Q9H668 368 aaKnown RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms