RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 CSNK1G3Q9Y6M4 447 aa15.24■□□□□ 0.03
SDC3-203ENST00000471567 CNOT1A5YKK6 2376 aaKnown RBP15.24■□□□□ 0.03
SDC3-203ENST00000471567 PCNX2A6NKB5 2137 aa15.23■□□□□ 0.03
SDC3-203ENST00000471567 NEMP2A6NFY4 417 aa15.23■□□□□ 0.03
SDC3-203ENST00000471567 ERI2A8K979 691 aaKnown RBP15.23■□□□□ 0.03
SDC3-203ENST00000471567 PGRMC1O00264 195 aaKnown RBP15.23■□□□□ 0.03
SDC3-203ENST00000471567 IFNB1P01574 187 aa15.23■□□□□ 0.03
SDC3-203ENST00000471567 JUNDP17535 347 aa15.23■□□□□ 0.03
SDC3-203ENST00000471567 HMGCLP35914 325 aa15.23■□□□□ 0.03
SDC3-203ENST00000471567 CDK3Q00526 305 aa15.23■□□□□ 0.03
SDC3-203ENST00000471567 ZNF542PQ5EBM4 170 aa15.23■□□□□ 0.03
SDC3-203ENST00000471567 PPM1JQ5JR12 505 aa15.23■□□□□ 0.03
SDC3-203ENST00000471567 HENMT1Q5T8I9 393 aaKnown RBP15.23■□□□□ 0.03
SDC3-203ENST00000471567 FAXCQ5TGI0 409 aa15.23■□□□□ 0.03
SDC3-203ENST00000471567 ENPP7Q6UWV6 458 aa15.23■□□□□ 0.03
SDC3-203ENST00000471567 ERMP1Q7Z2K6 904 aa15.23■□□□□ 0.03
SDC3-203ENST00000471567 HEATR4Q86WZ0 1026 aa15.23■□□□□ 0.03
SDC3-203ENST00000471567 PHACTR4Q8IZ21 702 aa15.23■□□□□ 0.03
SDC3-203ENST00000471567 SLC25A45Q8N413 288 aa15.23■□□□□ 0.03
SDC3-203ENST00000471567 TTC30BQ8N4P2 665 aa15.23■□□□□ 0.03
SDC3-203ENST00000471567 CCDC89Q8N998 374 aa15.23■□□□□ 0.03
SDC3-203ENST00000471567 OR56A4Q8NGH8 313 aa15.23■□□□□ 0.03
SDC3-203ENST00000471567 BAHD1Q8TBE0 780 aaPredicted RBP15.23■□□□□ 0.03
SDC3-203ENST00000471567 COG1Q8WTW3 980 aa15.23■□□□□ 0.03
SDC3-203ENST00000471567 MS4A14Q96JA4 679 aa15.23■□□□□ 0.03
SDC3-203ENST00000471567 WDR24Q96S15 920 aa15.23■□□□□ 0.03
SDC3-203ENST00000471567 TBL1YQ9BQ87 522 aa15.23■□□□□ 0.03
SDC3-203ENST00000471567 SLC13A1Q9BZW2 595 aa15.23■□□□□ 0.03
SDC3-203ENST00000471567 LRRC40Q9H9A6 602 aa15.23■□□□□ 0.03
SDC3-203ENST00000471567 PAK5Q9P286 719 aa15.23■□□□□ 0.03
SDC3-203ENST00000471567 SPASTQ9UBP0 616 aa15.23■□□□□ 0.03
SDC3-203ENST00000471567 KLQ9UEF7 1012 aa15.23■□□□□ 0.03
SDC3-203ENST00000471567 KLF15Q9UIH9 416 aa15.23■□□□□ 0.03
SDC3-203ENST00000471567 BTBD3Q9Y2F9 522 aa15.23■□□□□ 0.03
SDC3-203ENST00000471567 SDC3O75056 442 aa15.22■□□□□ 0.03
SDC3-203ENST00000471567 RASGRP1O95267 797 aa15.22■□□□□ 0.03
SDC3-203ENST00000471567 AP2A1O95782 977 aa15.22■□□□□ 0.03
SDC3-203ENST00000471567 SOD1P00441 154 aa15.22■□□□□ 0.03
SDC3-203ENST00000471567 HK3P52790 923 aa15.22■□□□□ 0.03
SDC3-203ENST00000471567 SRP54P61011 504 aaKnown RBP15.22■□□□□ 0.03
SDC3-203ENST00000471567 TRIP6Q15654 476 aaKnown RBP15.22■□□□□ 0.03
SDC3-203ENST00000471567 ALG11Q2TAA5 492 aa15.22■□□□□ 0.03
SDC3-203ENST00000471567 ZDHHC20Q5W0Z9 365 aa15.22■□□□□ 0.03
SDC3-203ENST00000471567 PAPD7Q5XG87 772 aaKnown RBP15.22■□□□□ 0.03
SDC3-203ENST00000471567 PDPK2PQ6A1A2 396 aa15.22■□□□□ 0.03
SDC3-203ENST00000471567 DENND5AQ6IQ26 1287 aa15.22■□□□□ 0.03
SDC3-203ENST00000471567 PSAPL1Q6NUJ1 521 aa15.22■□□□□ 0.03
SDC3-203ENST00000471567 GLRX5Q86SX6 157 aa15.22■□□□□ 0.03
SDC3-203ENST00000471567 DTX3LQ8TDB6 740 aa15.22■□□□□ 0.03
SDC3-203ENST00000471567 BLOC1S5Q8TDH9 187 aa15.22■□□□□ 0.03
SDC3-203ENST00000471567 CAMK1GQ96NX5 476 aa15.22■□□□□ 0.03
SDC3-203ENST00000471567 LGR4Q9BXB1 951 aa15.22■□□□□ 0.03
SDC3-203ENST00000471567 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.22■□□□□ 0.03
SDC3-203ENST00000471567 APOBEC3BQ9UH17 382 aaKnown RBP15.22■□□□□ 0.03
SDC3-203ENST00000471567 PNMA8BQ9ULN7 279 aaPredicted RBP15.22■□□□□ 0.03
SDC3-203ENST00000471567 DGKBQ9Y6T7 804 aa15.22■□□□□ 0.03
SDC3-203ENST00000471567 TMEM202A6NGA9 273 aa15.21■□□□□ 0.03
SDC3-203ENST00000471567 AURKAO14965 403 aa15.21■□□□□ 0.03
SDC3-203ENST00000471567 SCAMP1O15126 338 aa15.21■□□□□ 0.03
SDC3-203ENST00000471567 AQP9O43315 295 aa15.21■□□□□ 0.03
SDC3-203ENST00000471567 PPFIA2O75334 1257 aa15.21■□□□□ 0.03
SDC3-203ENST00000471567 TNFP01375 233 aa15.21■□□□□ 0.03
SDC3-203ENST00000471567 BPIP17213 487 aa15.21■□□□□ 0.03
SDC3-203ENST00000471567 MSLNQ13421 630 aaPredicted RBP15.21■□□□□ 0.03
SDC3-203ENST00000471567 TAF1AQ15573 450 aaPredicted RBP15.21■□□□□ 0.03
SDC3-203ENST00000471567 CYP1B1Q16678 543 aa15.21■□□□□ 0.03
SDC3-203ENST00000471567 GSTA5Q7RTV2 222 aa15.21■□□□□ 0.03
SDC3-203ENST00000471567 GLT6D1Q7Z4J2 308 aa15.21■□□□□ 0.03
SDC3-203ENST00000471567 LINC00523Q86TU6 105 aa15.21■□□□□ 0.03
SDC3-203ENST00000471567 HID1Q8IV36 788 aa15.21■□□□□ 0.03
SDC3-203ENST00000471567 SDR16C5Q8N3Y7 309 aa15.21■□□□□ 0.03
SDC3-203ENST00000471567 FSTL5Q8N475 847 aaPredicted RBP15.21■□□□□ 0.03
SDC3-203ENST00000471567 TRAM1L1Q8N609 369 aa15.21■□□□□ 0.03
SDC3-203ENST00000471567 EID2Q8N6I1 236 aa15.21■□□□□ 0.03
SDC3-203ENST00000471567 PDCD7Q8N8D1 485 aaKnown RBP15.21■□□□□ 0.03
SDC3-203ENST00000471567 GPR26Q8NDV2 337 aa15.21■□□□□ 0.03
SDC3-203ENST00000471567 ZNF548Q8NEK5 533 aaPredicted RBP15.21■□□□□ 0.03
SDC3-203ENST00000471567 BRSK1Q8TDC3 778 aa15.21■□□□□ 0.03
SDC3-203ENST00000471567 TSACCQ96A04 125 aaPredicted RBP15.21■□□□□ 0.03
SDC3-203ENST00000471567 MAGOHBQ96A72 148 aaKnown RBP15.21■□□□□ 0.03
SDC3-203ENST00000471567 HIC2Q96JB3 615 aa15.21■□□□□ 0.03
SDC3-203ENST00000471567 PLEKHG4BQ96PX9 1271 aa15.21■□□□□ 0.03
SDC3-203ENST00000471567 AGAP2Q99490 1192 aa15.21■□□□□ 0.03
SDC3-203ENST00000471567 NAPGQ99747 312 aaPredicted RBP15.21■□□□□ 0.03
SDC3-203ENST00000471567 C19orf43Q9BQ61 176 aa15.21■□□□□ 0.03
SDC3-203ENST00000471567 APOL2Q9BQE5 337 aa15.21■□□□□ 0.03
SDC3-203ENST00000471567 ZSCAN5AQ9BUG6 496 aa15.21■□□□□ 0.03
SDC3-203ENST00000471567 FRMD8Q9BZ67 464 aaPredicted RBP15.21■□□□□ 0.03
SDC3-203ENST00000471567 ETNK1Q9HBU6 452 aa15.21■□□□□ 0.03
SDC3-203ENST00000471567 UCKL1Q9NWZ5 548 aa15.21■□□□□ 0.03
SDC3-203ENST00000471567 IL17CQ9P0M4 197 aa15.21■□□□□ 0.03
SDC3-203ENST00000471567 CTAGE9A4FU28 777 aa15.2■□□□□ 0.02
SDC3-203ENST00000471567 C2orf81A6NN90 581 aa15.2■□□□□ 0.02
SDC3-203ENST00000471567 TPP1O14773 563 aa15.2■□□□□ 0.02
SDC3-203ENST00000471567 GIPC1O14908 333 aa15.2■□□□□ 0.02
SDC3-203ENST00000471567 TNFSF14O43557 240 aa15.2■□□□□ 0.02
SDC3-203ENST00000471567 USP12O75317 370 aa15.2■□□□□ 0.02
SDC3-203ENST00000471567 SUN1O94901 812 aa15.2■□□□□ 0.02
SDC3-203ENST00000471567 CRTAMO95727 393 aa15.2■□□□□ 0.02
SDC3-203ENST00000471567 ALPPL2P10696 532 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms