RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 CD44P16070 742 aaKnown RBP6.84□□□□□ -1.31
HDAC1-204ENST00000471488 AMD1P17707 334 aa6.84□□□□□ -1.31
HDAC1-204ENST00000471488 BMP6P22004 513 aa6.84□□□□□ -1.31
HDAC1-204ENST00000471488 RGRP47804 291 aa6.84□□□□□ -1.31
HDAC1-204ENST00000471488 LEPRP48357 1165 aaKnown RBP6.84□□□□□ -1.31
HDAC1-204ENST00000471488 GFERP55789 205 aa6.84□□□□□ -1.31
HDAC1-204ENST00000471488 MARSP56192 900 aaKnown RBP6.84□□□□□ -1.31
HDAC1-204ENST00000471488 POLR2LP62875 67 aaKnown RBP6.84□□□□□ -1.31
HDAC1-204ENST00000471488 CDK3Q00526 305 aa6.84□□□□□ -1.31
HDAC1-204ENST00000471488 RALGDSQ12967 914 aa6.84□□□□□ -1.31
HDAC1-204ENST00000471488 INO80DQ53TQ3 878 aaPredicted RBP6.84□□□□□ -1.31
HDAC1-204ENST00000471488 TMCO4Q5TGY1 634 aa6.84□□□□□ -1.31
HDAC1-204ENST00000471488 HGSNATQ68CP4 663 aa6.84□□□□□ -1.31
HDAC1-204ENST00000471488 TRNP1Q6NT89 227 aa6.84□□□□□ -1.31
HDAC1-204ENST00000471488 JMJD6Q6NYC1 403 aaPredicted RBP6.84□□□□□ -1.31
HDAC1-204ENST00000471488 FAM199XQ6PEV8 388 aaPredicted RBP6.84□□□□□ -1.31
HDAC1-204ENST00000471488 WDR74Q6RFH5 385 aaPredicted RBP6.84□□□□□ -1.31
HDAC1-204ENST00000471488 GBP6Q6ZN66 633 aa6.84□□□□□ -1.31
HDAC1-204ENST00000471488 LYSMD3Q7Z3D4 306 aa6.84□□□□□ -1.31
HDAC1-204ENST00000471488 SRLQ86TD4 932 aa6.84□□□□□ -1.31
HDAC1-204ENST00000471488 SLC9B2Q86UD5 537 aa6.84□□□□□ -1.31
HDAC1-204ENST00000471488 GALNT13Q8IUC8 556 aa6.84□□□□□ -1.31
HDAC1-204ENST00000471488 TRIM48Q8IWZ4 208 aa6.84□□□□□ -1.31
HDAC1-204ENST00000471488 CISD2Q8N5K1 135 aaKnown RBP6.84□□□□□ -1.31
HDAC1-204ENST00000471488 TSEN2Q8NCE0 465 aaKnown RBP6.84□□□□□ -1.31
HDAC1-204ENST00000471488 GPT2Q8TD30 523 aa6.84□□□□□ -1.31
HDAC1-204ENST00000471488 RXFP2Q8WXD0 754 aa6.84□□□□□ -1.31
HDAC1-204ENST00000471488 CASKIN2Q8WXE0 1202 aa6.84□□□□□ -1.31
HDAC1-204ENST00000471488 SHC3Q92529 594 aa6.84□□□□□ -1.31
HDAC1-204ENST00000471488 VOPP1Q96AW1 172 aa6.84□□□□□ -1.31
HDAC1-204ENST00000471488 ZNF641Q96N77 438 aaPredicted RBP6.84□□□□□ -1.31
HDAC1-204ENST00000471488 GSDMAQ96QA5 445 aa6.84□□□□□ -1.31
HDAC1-204ENST00000471488 RUFY1Q96T51 708 aa6.84□□□□□ -1.31
HDAC1-204ENST00000471488 ING2Q9H160 280 aa6.84□□□□□ -1.31
HDAC1-204ENST00000471488 OSGEPL1Q9H4B0 414 aa6.84□□□□□ -1.31
HDAC1-204ENST00000471488 SP110Q9HB58 689 aa6.84□□□□□ -1.31
HDAC1-204ENST00000471488 APEX2Q9UBZ4 518 aa6.84□□□□□ -1.31
HDAC1-204ENST00000471488 PADI1Q9ULC6 663 aa6.84□□□□□ -1.31
HDAC1-204ENST00000471488 KCNK6Q9Y257 313 aa6.84□□□□□ -1.31
HDAC1-204ENST00000471488 MFHAS1Q9Y4C4 1052 aa6.84□□□□□ -1.31
HDAC1-204ENST00000471488 ZNF451Q9Y4E5 1061 aa6.84□□□□□ -1.31
HDAC1-204ENST00000471488 ST14Q9Y5Y6 855 aa6.84□□□□□ -1.31
HDAC1-204ENST00000471488 CSMD1Q96PZ7 3565 aa6.84□□□□□ -1.31
HDAC1-204ENST00000471488 DOCK4Q8N1I0 1966 aa6.84□□□□□ -1.32
HDAC1-204ENST00000471488 RP1L1Q8IWN7 2480 aaPredicted RBP6.84□□□□□ -1.32
HDAC1-204ENST00000471488 C2CD3Q4AC94 2353 aa6.83□□□□□ -1.32
HDAC1-204ENST00000471488 ARHGEF17Q96PE2 2063 aaPredicted RBP6.83□□□□□ -1.32
HDAC1-204ENST00000471488 A0A0U1RQS6 177 aa6.83□□□□□ -1.32
HDAC1-204ENST00000471488 BICDL2A1A5D9 508 aa6.83□□□□□ -1.32
HDAC1-204ENST00000471488 PRSS44E7EML9 344 aa6.83□□□□□ -1.32
HDAC1-204ENST00000471488 FOXN3O00409 490 aaPredicted RBP6.83□□□□□ -1.32
HDAC1-204ENST00000471488 DAPK3O43293 454 aa6.83□□□□□ -1.32
HDAC1-204ENST00000471488 HNRNPRO43390 633 aaKnown RBP6.83□□□□□ -1.32
HDAC1-204ENST00000471488 SORBS2O94875 1100 aaKnown RBP6.83□□□□□ -1.32
HDAC1-204ENST00000471488 EML2O95834 649 aa6.83□□□□□ -1.32
HDAC1-204ENST00000471488 GNA14O95837 355 aa6.83□□□□□ -1.32
HDAC1-204ENST00000471488 CPP00450 1065 aa6.83□□□□□ -1.32
HDAC1-204ENST00000471488 HOXC4P09017 264 aaPredicted RBP6.83□□□□□ -1.32
HDAC1-204ENST00000471488 ACP5P13686 325 aa6.83□□□□□ -1.32
HDAC1-204ENST00000471488 CTPS1P17812 591 aa6.83□□□□□ -1.32
HDAC1-204ENST00000471488 HNRNPH3P31942 346 aaKnown RBP6.83□□□□□ -1.32
HDAC1-204ENST00000471488 TRIM23P36406 574 aa6.83□□□□□ -1.32
HDAC1-204ENST00000471488 GARSP41250 739 aaKnown RBP6.83□□□□□ -1.32
HDAC1-204ENST00000471488 RPS15P62841 145 aaKnown RBP6.83□□□□□ -1.32
HDAC1-204ENST00000471488 PAK1Q13153 545 aa6.83□□□□□ -1.32
HDAC1-204ENST00000471488 AGERQ15109 404 aa6.83□□□□□ -1.32
HDAC1-204ENST00000471488 PTPRRQ15256 657 aa6.83□□□□□ -1.32
HDAC1-204ENST00000471488 CHRNA6Q15825 494 aa6.83□□□□□ -1.32
HDAC1-204ENST00000471488 EXOC3L4Q17RC7 722 aa6.83□□□□□ -1.32
HDAC1-204ENST00000471488 ZRANB3Q5FWF4 1079 aa6.83□□□□□ -1.32
HDAC1-204ENST00000471488 NAA35Q5VZE5 725 aa6.83□□□□□ -1.32
HDAC1-204ENST00000471488 SLC6A19Q695T7 634 aa6.83□□□□□ -1.32
HDAC1-204ENST00000471488 IRGCQ6NXR0 463 aa6.83□□□□□ -1.32
HDAC1-204ENST00000471488 FAM92BQ6ZTR7 304 aa6.83□□□□□ -1.32
HDAC1-204ENST00000471488 Q6ZVL8 140 aa6.83□□□□□ -1.32
HDAC1-204ENST00000471488 DPPA4Q7L190 304 aa6.83□□□□□ -1.32
HDAC1-204ENST00000471488 ARHGAP22Q7Z5H3 698 aa6.83□□□□□ -1.32
HDAC1-204ENST00000471488 HSD11B1LQ7Z5J1 315 aa6.83□□□□□ -1.32
HDAC1-204ENST00000471488 C17orf82Q86X59 251 aaPredicted RBP6.83□□□□□ -1.32
HDAC1-204ENST00000471488 PLXDC1Q8IUK5 500 aa6.83□□□□□ -1.32
HDAC1-204ENST00000471488 TRIM59Q8IWR1 403 aa6.83□□□□□ -1.32
HDAC1-204ENST00000471488 MCEMP1Q8IX19 187 aa6.83□□□□□ -1.32
HDAC1-204ENST00000471488 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.83□□□□□ -1.32
HDAC1-204ENST00000471488 HCAR2Q8TDS4 363 aa6.83□□□□□ -1.32
HDAC1-204ENST00000471488 FAM172AQ8WUF8 416 aa6.83□□□□□ -1.32
HDAC1-204ENST00000471488 NT5C3BQ969T7 300 aa6.83□□□□□ -1.32
HDAC1-204ENST00000471488 SH3KBP1Q96B97 665 aa6.83□□□□□ -1.32
HDAC1-204ENST00000471488 DHTKD1Q96HY7 919 aaPredicted RBP6.83□□□□□ -1.32
HDAC1-204ENST00000471488 FAM81BQ96LP2 452 aa6.83□□□□□ -1.32
HDAC1-204ENST00000471488 TUBGCP5Q96RT8 1024 aa6.83□□□□□ -1.32
HDAC1-204ENST00000471488 FRMD8Q9BZ67 464 aaPredicted RBP6.83□□□□□ -1.32
HDAC1-204ENST00000471488 SPRY4Q9C004 299 aa6.83□□□□□ -1.32
HDAC1-204ENST00000471488 ILKAPQ9H0C8 392 aaPredicted RBP6.83□□□□□ -1.32
HDAC1-204ENST00000471488 CATSPERBQ9H7T0 1116 aa6.83□□□□□ -1.32
HDAC1-204ENST00000471488 ASF1BQ9NVP2 202 aa6.83□□□□□ -1.32
HDAC1-204ENST00000471488 HOOK1Q9UJC3 728 aaKnown RBP6.83□□□□□ -1.32
HDAC1-204ENST00000471488 DNAJC12Q9UKB3 198 aa6.83□□□□□ -1.32
HDAC1-204ENST00000471488 AJAP1Q9UKB5 411 aaPredicted RBP6.83□□□□□ -1.32
HDAC1-204ENST00000471488 MED13Q9UHV7 2174 aa6.83□□□□□ -1.32
HDAC1-204ENST00000471488 ZNF106Q9H2Y7 1883 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms