RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 KLF1Q13351 362 aaPredicted RBP9.1□□□□□ -0.95
SF3A1-206ENST00000471037 DPYSQ14117 519 aa9.1□□□□□ -0.95
SF3A1-206ENST00000471037 NFATC4Q14934 902 aa9.1□□□□□ -0.95
SF3A1-206ENST00000471037 LRRC14Q15048 493 aa9.1□□□□□ -0.95
SF3A1-206ENST00000471037 WSCD2Q2TBF2 565 aa9.1□□□□□ -0.95
SF3A1-206ENST00000471037 LINC00303Q3SY05 128 aa9.1□□□□□ -0.95
SF3A1-206ENST00000471037 ANKRD20A8PQ5CZ79 823 aa9.1□□□□□ -0.95
SF3A1-206ENST00000471037 KAZNQ674X7 775 aa9.1□□□□□ -0.95
SF3A1-206ENST00000471037 SLC9A4Q6AI14 798 aa9.1□□□□□ -0.95
SF3A1-206ENST00000471037 AADACL2Q6P093 401 aa9.1□□□□□ -0.95
SF3A1-206ENST00000471037 LEKR1Q6ZMV7 388 aa9.1□□□□□ -0.95
SF3A1-206ENST00000471037 RFX8Q6ZV50 586 aa9.1□□□□□ -0.95
SF3A1-206ENST00000471037 BBS12Q6ZW61 710 aa9.1□□□□□ -0.95
SF3A1-206ENST00000471037 GKN2Q86XP6 184 aa9.1□□□□□ -0.95
SF3A1-206ENST00000471037 RFX6Q8HWS3 928 aa9.1□□□□□ -0.95
SF3A1-206ENST00000471037 HID1Q8IV36 788 aa9.1□□□□□ -0.95
SF3A1-206ENST00000471037 RTL3Q8N8U3 475 aaKnown RBP9.1□□□□□ -0.95
SF3A1-206ENST00000471037 EXD3Q8N9H8 876 aa9.1□□□□□ -0.95
SF3A1-206ENST00000471037 TTC13Q8NBP0 860 aa9.1□□□□□ -0.95
SF3A1-206ENST00000471037 GPR156Q8NFN8 814 aa9.1□□□□□ -0.95
SF3A1-206ENST00000471037 SGF29Q96ES7 293 aa9.1□□□□□ -0.95
SF3A1-206ENST00000471037 TMEM74Q96NL1 305 aa9.1□□□□□ -0.95
SF3A1-206ENST00000471037 RBM15Q96T37 977 aaKnown RBP eCLIP9.1□□□□□ -0.95
SF3A1-206ENST00000471037 WRAP53Q9BUR4 548 aaKnown RBP9.1□□□□□ -0.95
SF3A1-206ENST00000471037 NOL6Q9H6R4 1146 aaKnown RBP9.1□□□□□ -0.95
SF3A1-206ENST00000471037 CATSPERBQ9H7T0 1116 aa9.1□□□□□ -0.95
SF3A1-206ENST00000471037 HOMER3Q9NSC5 361 aa9.1□□□□□ -0.95
SF3A1-206ENST00000471037 GULP1Q9UBP9 304 aa9.1□□□□□ -0.95
SF3A1-206ENST00000471037 APPL1Q9UKG1 709 aa9.1□□□□□ -0.95
SF3A1-206ENST00000471037 GPR34Q9UPC5 381 aa9.1□□□□□ -0.95
SF3A1-206ENST00000471037 DGKBQ9Y6T7 804 aa9.1□□□□□ -0.95
SF3A1-206ENST00000471037 KIF26BQ2KJY2 2108 aa9.1□□□□□ -0.95
SF3A1-206ENST00000471037 CYSRT1A8MQ03 144 aa9.09□□□□□ -0.95
SF3A1-206ENST00000471037 WASH4PA8MWX3 477 aa9.09□□□□□ -0.95
SF3A1-206ENST00000471037 CCDC188H7C350 402 aa9.09□□□□□ -0.95
SF3A1-206ENST00000471037 PDE2AO00408 941 aaPredicted RBP9.09□□□□□ -0.95
SF3A1-206ENST00000471037 APOL1O14791 398 aa9.09□□□□□ -0.95
SF3A1-206ENST00000471037 DAPK3O43293 454 aa9.09□□□□□ -0.95
SF3A1-206ENST00000471037 CST8O60676 142 aa9.09□□□□□ -0.95
SF3A1-206ENST00000471037 JMJD7P0C870 316 aa9.09□□□□□ -0.95
SF3A1-206ENST00000471037 KRT10P13645 584 aa9.09□□□□□ -0.95
SF3A1-206ENST00000471037 PNLIPP16233 465 aa9.09□□□□□ -0.95
SF3A1-206ENST00000471037 ITIH2P19823 946 aa9.09□□□□□ -0.95
SF3A1-206ENST00000471037 EPHB2P29323 1055 aa9.09□□□□□ -0.95
SF3A1-206ENST00000471037 SERPINB6P35237 376 aa9.09□□□□□ -0.95
SF3A1-206ENST00000471037 MMP12P39900 470 aa9.09□□□□□ -0.95
SF3A1-206ENST00000471037 CSRP3P50461 194 aa9.09□□□□□ -0.95
SF3A1-206ENST00000471037 SRP54P61011 504 aaKnown RBP9.09□□□□□ -0.95
SF3A1-206ENST00000471037 CCL7P80098 99 aa9.09□□□□□ -0.95
SF3A1-206ENST00000471037 ZFP36L1Q07352 338 aaKnown RBP9.09□□□□□ -0.95
SF3A1-206ENST00000471037 MTM1Q13496 603 aa9.09□□□□□ -0.95
SF3A1-206ENST00000471037 GRM3Q14832 879 aa9.09□□□□□ -0.95
SF3A1-206ENST00000471037 UGP2Q16851 508 aa9.09□□□□□ -0.95
SF3A1-206ENST00000471037 ENPP7Q6UWV6 458 aa9.09□□□□□ -0.95
SF3A1-206ENST00000471037 PRICKLE2Q7Z3G6 844 aa9.09□□□□□ -0.95
SF3A1-206ENST00000471037 JAMLQ86YT9 394 aa9.09□□□□□ -0.95
SF3A1-206ENST00000471037 ATL2Q8NHH9 583 aa9.09□□□□□ -0.95
SF3A1-206ENST00000471037 TSACCQ96A04 125 aaPredicted RBP9.09□□□□□ -0.95
SF3A1-206ENST00000471037 TMEM159Q96B96 161 aa9.09□□□□□ -0.95
SF3A1-206ENST00000471037 PDXPQ96GD0 296 aa9.09□□□□□ -0.95
SF3A1-206ENST00000471037 WDR92Q96MX6 357 aa9.09□□□□□ -0.95
SF3A1-206ENST00000471037 HERPUD2Q9BSE4 406 aa9.09□□□□□ -0.95
SF3A1-206ENST00000471037 APOOQ9BUR5 198 aa9.09□□□□□ -0.95
SF3A1-206ENST00000471037 HEMGNQ9BXL5 484 aa9.09□□□□□ -0.95
SF3A1-206ENST00000471037 FRMD8P1Q9BZ68 369 aaPredicted RBP9.09□□□□□ -0.95
SF3A1-206ENST00000471037 MAGEB5Q9BZ81 275 aa9.09□□□□□ -0.95
SF3A1-206ENST00000471037 FOXP3Q9BZS1 431 aa9.09□□□□□ -0.95
SF3A1-206ENST00000471037 LRRN3Q9H3W5 708 aa9.09□□□□□ -0.95
SF3A1-206ENST00000471037 STARD5Q9NSY2 213 aa9.09□□□□□ -0.95
SF3A1-206ENST00000471037 SIRPGQ9P1W8 387 aa9.09□□□□□ -0.95
SF3A1-206ENST00000471037 LHX3Q9UBR4 397 aa9.09□□□□□ -0.95
SF3A1-206ENST00000471037 KLQ9UEF7 1012 aa9.09□□□□□ -0.95
SF3A1-206ENST00000471037 COQ6Q9Y2Z9 468 aa9.09□□□□□ -0.95
SF3A1-206ENST00000471037 LOXL2Q9Y4K0 774 aa9.09□□□□□ -0.95
SF3A1-206ENST00000471037 CTAGE15A4D2H0 777 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 CFAP69A5D8W1 941 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 RASA4BC9J798 803 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 PYCARD-AS1I3L0S3 204 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 APOC4-APOC2K7ER74 178 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 TERTO14746 1132 aaKnown RBP9.08□□□□□ -0.96
SF3A1-206ENST00000471037 INSIG1O15503 277 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 RASA4O43374 803 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 PIGNO95427 931 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 APOC2P02655 101 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 CTAGE8P0CG41 777 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 HGFP14210 728 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 GLB1P16278 677 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 ERCC2P18074 760 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 ITGB6P18564 788 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 XPAP23025 273 aaPredicted RBP9.08□□□□□ -0.96
SF3A1-206ENST00000471037 AMPD1P23109 780 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 NR2C2P49116 596 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 KIAA1024LP59773 190 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 NFATC3Q12968 1075 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 SERINC3Q13530 473 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 INPP5AQ14642 412 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 PAFAH1B3Q15102 231 aaKnown RBP9.08□□□□□ -0.96
SF3A1-206ENST00000471037 LLGL1Q15334 1064 aa9.08□□□□□ -0.96
SF3A1-206ENST00000471037 SIX1Q15475 284 aaPredicted RBP9.08□□□□□ -0.96
SF3A1-206ENST00000471037 TGIF1Q15583 401 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms