RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 CD3EAPO15446 510 aaKnown RBP13.63□□□□□ -0.23
BRCA1-209ENST00000470026 HNRNPRO43390 633 aaKnown RBP13.63□□□□□ -0.23
BRCA1-209ENST00000470026 TIPRLO75663 272 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 TRPA1O75762 1119 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 RPP40O75818 363 aaKnown RBP13.63□□□□□ -0.23
BRCA1-209ENST00000470026 MT-CO1P00395 513 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 IGLV3-27P01718 113 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 PSMA3P25788 255 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 FOXA1P55317 472 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 EML3Q32P44 896 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 SLC39A12Q504Y0 691 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 MRNIPQ6NTE8 343 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 FBXL22Q6P050 247 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 ZBTB49Q6ZSB9 765 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 SCN4BQ8IWT1 228 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 MYO1HQ8N1T3 1032 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 BRSK1Q8TDC3 778 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 KIAA1191Q96A73 305 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 LRCH3Q96II8 777 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 SLC45A3Q96JT2 553 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 DNAJC1Q96KC8 554 aaKnown RBP13.63□□□□□ -0.23
BRCA1-209ENST00000470026 TMEM79Q9BSE2 394 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.63□□□□□ -0.23
BRCA1-209ENST00000470026 PHF24Q9UPV7 400 aa13.63□□□□□ -0.23
BRCA1-209ENST00000470026 TTC24A2A3L6 582 aaPredicted RBP13.62□□□□□ -0.23
BRCA1-209ENST00000470026 CCDC162PA2VCL2 907 aa13.62□□□□□ -0.23
BRCA1-209ENST00000470026 H3BSA7 217 aa13.62□□□□□ -0.23
BRCA1-209ENST00000470026 TMEM189-UBE2V1I3L0A0 370 aa13.62□□□□□ -0.23
BRCA1-209ENST00000470026 SOCS2O14508 198 aa13.62□□□□□ -0.23
BRCA1-209ENST00000470026 SIX3O95343 332 aaPredicted RBP13.62□□□□□ -0.23
BRCA1-209ENST00000470026 STAMBPO95630 424 aa13.62□□□□□ -0.23
BRCA1-209ENST00000470026 CKMT2P17540 419 aa13.62□□□□□ -0.23
BRCA1-209ENST00000470026 FGFR3P22607 806 aa13.62□□□□□ -0.23
BRCA1-209ENST00000470026 PCSK6P29122 969 aa13.62□□□□□ -0.23
BRCA1-209ENST00000470026 GRIA3P42263 894 aa13.62□□□□□ -0.23
BRCA1-209ENST00000470026 YBEYP58557 167 aaPredicted RBP13.62□□□□□ -0.23
BRCA1-209ENST00000470026 GRIK2Q13002 908 aa13.62□□□□□ -0.23
BRCA1-209ENST00000470026 GRB7Q14451 532 aa13.62□□□□□ -0.23
BRCA1-209ENST00000470026 LPIN1Q14693 890 aa13.62□□□□□ -0.23
BRCA1-209ENST00000470026 TRIP4Q15650 581 aaPredicted RBP13.62□□□□□ -0.23
BRCA1-209ENST00000470026 ACBD5Q5T8D3 534 aaPredicted RBP13.62□□□□□ -0.23
BRCA1-209ENST00000470026 C17orf99Q6UX52 265 aa13.62□□□□□ -0.23
BRCA1-209ENST00000470026 RAB44Q7Z6P3 723 aaPredicted RBP13.62□□□□□ -0.23
BRCA1-209ENST00000470026 FIBCD1Q8N539 461 aa13.62□□□□□ -0.23
BRCA1-209ENST00000470026 ADAMTS16Q8TE57 1224 aa13.62□□□□□ -0.23
BRCA1-209ENST00000470026 TRPC4APQ8TEL6 797 aa13.62□□□□□ -0.23
BRCA1-209ENST00000470026 SOCS4Q8WXH5 440 aa13.62□□□□□ -0.23
BRCA1-209ENST00000470026 ADAM2Q99965 735 aa13.62□□□□□ -0.23
BRCA1-209ENST00000470026 C1QTNF3Q9BXJ4 246 aa13.62□□□□□ -0.23
BRCA1-209ENST00000470026 TRIM15Q9C019 465 aa13.62□□□□□ -0.23
BRCA1-209ENST00000470026 MID1IP1Q9NPA3 183 aa13.62□□□□□ -0.23
BRCA1-209ENST00000470026 TIMMDC1Q9NPL8 285 aa13.62□□□□□ -0.23
BRCA1-209ENST00000470026 CMTM6Q9NX76 183 aa13.62□□□□□ -0.23
BRCA1-209ENST00000470026 GMIPQ9P107 970 aa13.62□□□□□ -0.23
BRCA1-209ENST00000470026 ACTR3BQ9P1U1 418 aa13.62□□□□□ -0.23
BRCA1-209ENST00000470026 CHD5Q8TDI0 1954 aa13.62□□□□□ -0.23
BRCA1-209ENST00000470026 GBF1Q92538 1859 aa13.62□□□□□ -0.23
BRCA1-209ENST00000470026 UBXN8O00124 270 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 PLOD2O00469 737 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 NR5A2O00482 541 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 B4GALT3O60512 393 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 PRAMEF11O60813 436 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 KERAO60938 352 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 VPS4BO75351 444 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 BMP10O95393 424 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 LBPP18428 481 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 SLC6A2P23975 617 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 MAGEA11P43364 429 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 CDK9P50750 372 aaKnown RBP13.61□□□□□ -0.23
BRCA1-209ENST00000470026 STC1P52823 247 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 CYTH1Q15438 398 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 KCTD21Q4G0X4 260 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 SETMARQ53H47 684 aaPredicted RBP13.61□□□□□ -0.23
BRCA1-209ENST00000470026 PITRM1Q5JRX3 1037 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 BLOC1S3Q6QNY0 202 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 EPHX4Q8IUS5 362 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 DCP1BQ8IZD4 617 aaKnown RBP13.61□□□□□ -0.23
BRCA1-209ENST00000470026 EZH1Q92800 747 aaPredicted RBP13.61□□□□□ -0.23
BRCA1-209ENST00000470026 ZNF512Q96ME7 567 aaPredicted RBP13.61□□□□□ -0.23
BRCA1-209ENST00000470026 TRIB3Q96RU7 358 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 CCT7Q99832 543 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 SEMA3CQ99985 751 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 DERL2Q9GZP9 239 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 POLR1EQ9GZS1 481 aaKnown RBP13.61□□□□□ -0.23
BRCA1-209ENST00000470026 PDFQ9HBH1 243 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 AGPAT4Q9NRZ5 378 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 INTS10Q9NVR2 710 aaKnown RBP13.61□□□□□ -0.23
BRCA1-209ENST00000470026 TUBA8Q9NY65 449 aaPredicted RBP13.61□□□□□ -0.23
BRCA1-209ENST00000470026 POLG2Q9UHN1 485 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 SLC8A2Q9UPR5 921 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 MED16Q9Y2X0 877 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 PCDHA9Q9Y5H5 950 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 GPR45Q9Y5Y3 372 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 PTGDR2Q9Y5Y4 395 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 ARL5AQ9Y689 179 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 LRRC14BA6NHZ5 514 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 MUSKO15146 869 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 RAMP2O60895 175 aa13.61□□□□□ -0.23
BRCA1-209ENST00000470026 TRMUO75648 421 aaKnown RBP13.61□□□□□ -0.23
BRCA1-209ENST00000470026 RPS17P08708 135 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms