RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 CCDC68Q9H2F9 335 aa18.92■□□□□ 0.62
SMC4-209ENST00000468653 NMRAL1Q9HBL8 299 aa18.92■□□□□ 0.62
SMC4-209ENST00000468653 TMEM265A0A087WTH1 108 aa18.91■□□□□ 0.62
SMC4-209ENST00000468653 APOA4P06727 396 aa18.91■□□□□ 0.62
SMC4-209ENST00000468653 CTSLP07711 333 aa18.91■□□□□ 0.62
SMC4-209ENST00000468653 EIF2DP41214 584 aaKnown RBP18.91■□□□□ 0.62
SMC4-209ENST00000468653 CDKN2DP55273 166 aa18.91■□□□□ 0.62
SMC4-209ENST00000468653 CHI3L2Q15782 390 aa18.91■□□□□ 0.62
SMC4-209ENST00000468653 DBN1Q16643 649 aa18.91■□□□□ 0.62
SMC4-209ENST00000468653 ZNF805Q5CZA5 627 aa18.91■□□□□ 0.62
SMC4-209ENST00000468653 ATG16L1Q676U5 607 aa18.91■□□□□ 0.62
SMC4-209ENST00000468653 LRRC66Q68CR7 880 aa18.91■□□□□ 0.62
SMC4-209ENST00000468653 ZNF549Q6P9A3 640 aa18.91■□□□□ 0.62
SMC4-209ENST00000468653 PIGWQ7Z7B1 504 aa18.91■□□□□ 0.62
SMC4-209ENST00000468653 SFTPA1Q8IWL2 248 aa18.91■□□□□ 0.62
SMC4-209ENST00000468653 PPP1R14CQ8TAE6 165 aa18.91■□□□□ 0.62
SMC4-209ENST00000468653 GRAMD1AQ96CP6 724 aa18.91■□□□□ 0.62
SMC4-209ENST00000468653 GPAMQ9HCL2 828 aa18.91■□□□□ 0.62
SMC4-209ENST00000468653 SIRPGQ9P1W8 387 aa18.91■□□□□ 0.62
SMC4-209ENST00000468653 APPL1Q9UKG1 709 aa18.91■□□□□ 0.62
SMC4-209ENST00000468653 EDDM13A0A1B0GTR0 161 aa18.91■□□□□ 0.62
SMC4-209ENST00000468653 EBAG9O00559 213 aa18.91■□□□□ 0.62
SMC4-209ENST00000468653 EDF1O60869 148 aaKnown RBP18.91■□□□□ 0.62
SMC4-209ENST00000468653 DNAJC6O75061 913 aa18.91■□□□□ 0.62
SMC4-209ENST00000468653 SRP72O76094 671 aaKnown RBP18.91■□□□□ 0.62
SMC4-209ENST00000468653 HLA-EP13747 358 aa18.91■□□□□ 0.62
SMC4-209ENST00000468653 CPA3P15088 417 aa18.91■□□□□ 0.62
SMC4-209ENST00000468653 BPIP17213 487 aa18.91■□□□□ 0.62
SMC4-209ENST00000468653 POU3F3P20264 500 aaPredicted RBP18.91■□□□□ 0.62
SMC4-209ENST00000468653 XPAP23025 273 aaPredicted RBP18.91■□□□□ 0.62
SMC4-209ENST00000468653 NFKBIAP25963 317 aa18.91■□□□□ 0.62
SMC4-209ENST00000468653 FMO4P31512 558 aa18.91■□□□□ 0.62
SMC4-209ENST00000468653 ZNF234Q14588 700 aa18.91■□□□□ 0.62
SMC4-209ENST00000468653 TSNAXIP1Q2TAA8 658 aa18.91■□□□□ 0.62
SMC4-209ENST00000468653 LRRC73Q5JTD7 316 aa18.91■□□□□ 0.62
SMC4-209ENST00000468653 SERPINA13PQ6UXR4 307 aa18.91■□□□□ 0.62
SMC4-209ENST00000468653 CENPLQ8N0S6 344 aaPredicted RBP18.91■□□□□ 0.62
SMC4-209ENST00000468653 LPGAT1Q92604 370 aa18.91■□□□□ 0.62
SMC4-209ENST00000468653 PBXIP1Q96AQ6 731 aa18.91■□□□□ 0.62
SMC4-209ENST00000468653 NXNL1Q96CM4 212 aa18.91■□□□□ 0.62
SMC4-209ENST00000468653 AARSD1Q9BTE6 412 aaKnown RBP18.91■□□□□ 0.62
SMC4-209ENST00000468653 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.91■□□□□ 0.62
SMC4-209ENST00000468653 COPG2Q9UBF2 871 aa18.91■□□□□ 0.62
SMC4-209ENST00000468653 B4GALT6Q9UBX8 382 aa18.91■□□□□ 0.62
SMC4-209ENST00000468653 CD207Q9UJ71 328 aa18.91■□□□□ 0.62
SMC4-209ENST00000468653 MID2Q9UJV3 735 aa18.91■□□□□ 0.62
SMC4-209ENST00000468653 USP15Q9Y4E8 981 aaPredicted RBP18.91■□□□□ 0.62
SMC4-209ENST00000468653 NUMBLQ9Y6R0 609 aa18.91■□□□□ 0.62
SMC4-209ENST00000468653 KLF11O14901 512 aa18.9■□□□□ 0.62
SMC4-209ENST00000468653 KLHL2O95198 593 aa18.9■□□□□ 0.62
SMC4-209ENST00000468653 KAT7O95251 611 aa18.9■□□□□ 0.62
SMC4-209ENST00000468653 PRAMEF1O95521 474 aa18.9■□□□□ 0.62
SMC4-209ENST00000468653 CYP2A6P11509 494 aaPredicted RBP18.9■□□□□ 0.62
SMC4-209ENST00000468653 ITGALP20701 1170 aa18.9■□□□□ 0.62
SMC4-209ENST00000468653 ALDH3A1P30838 453 aa18.9■□□□□ 0.62
SMC4-209ENST00000468653 SPAM1P38567 509 aa18.9■□□□□ 0.62
SMC4-209ENST00000468653 KPNA2P52292 529 aaKnown RBP18.9■□□□□ 0.62
SMC4-209ENST00000468653 DMTNQ08495 405 aa18.9■□□□□ 0.62
SMC4-209ENST00000468653 ARHGEF7Q14155 803 aa18.9■□□□□ 0.62
SMC4-209ENST00000468653 COL19A1Q14993 1142 aa18.9■□□□□ 0.62
SMC4-209ENST00000468653 HNRNPA1L2Q32P51 320 aaKnown RBP18.9■□□□□ 0.62
SMC4-209ENST00000468653 NUDT18Q6ZVK8 323 aa18.9■□□□□ 0.62
SMC4-209ENST00000468653 CCDC91Q7Z6B0 441 aa18.9■□□□□ 0.62
SMC4-209ENST00000468653 STK40Q8N2I9 435 aa18.9■□□□□ 0.62
SMC4-209ENST00000468653 CBARPQ8N350 705 aaPredicted RBP18.9■□□□□ 0.62
SMC4-209ENST00000468653 CCDC197Q8NCU1 140 aa18.9■□□□□ 0.62
SMC4-209ENST00000468653 RAB3IL1Q8TBN0 382 aa18.9■□□□□ 0.62
SMC4-209ENST00000468653 TSSK1BQ9BXA7 367 aa18.9■□□□□ 0.62
SMC4-209ENST00000468653 IL26Q9NPH9 171 aa18.9■□□□□ 0.62
SMC4-209ENST00000468653 EPS15L1Q9UBC2 864 aa18.9■□□□□ 0.62
SMC4-209ENST00000468653 DKK3Q9UBP4 350 aa18.9■□□□□ 0.62
SMC4-209ENST00000468653 GLYATL1P3A0A0U1RQE8 302 aa18.89■□□□□ 0.61
SMC4-209ENST00000468653 TSPAN11A1L157 253 aa18.89■□□□□ 0.61
SMC4-209ENST00000468653 UPK3BL1B0FP48 263 aa18.89■□□□□ 0.61
SMC4-209ENST00000468653 UPK3BL2E5RIL1 263 aa18.89■□□□□ 0.61
SMC4-209ENST00000468653 SNX3O60493 162 aa18.89■□□□□ 0.61
SMC4-209ENST00000468653 PRNPP04156 253 aa18.89■□□□□ 0.61
SMC4-209ENST00000468653 APODP05090 189 aa18.89■□□□□ 0.61
SMC4-209ENST00000468653 TIMP2P16035 220 aa18.89■□□□□ 0.61
SMC4-209ENST00000468653 KCNA4P22459 653 aa18.89■□□□□ 0.61
SMC4-209ENST00000468653 FDXRP22570 491 aa18.89■□□□□ 0.61
SMC4-209ENST00000468653 LHCGRP22888 699 aa18.89■□□□□ 0.61
SMC4-209ENST00000468653 PPARGP37231 505 aaPredicted RBP18.89■□□□□ 0.61
SMC4-209ENST00000468653 GRIA2P42262 883 aa18.89■□□□□ 0.61
SMC4-209ENST00000468653 GLRBP48167 497 aa18.89■□□□□ 0.61
SMC4-209ENST00000468653 PTPN5P54829 565 aa18.89■□□□□ 0.61
SMC4-209ENST00000468653 PTSQ03393 145 aa18.89■□□□□ 0.61
SMC4-209ENST00000468653 CSHL1Q14406 222 aa18.89■□□□□ 0.61
SMC4-209ENST00000468653 PCLAFQ15004 111 aa18.89■□□□□ 0.61
SMC4-209ENST00000468653 POM121L1PQ3SYA9 428 aa18.89■□□□□ 0.61
SMC4-209ENST00000468653 CERS6Q6ZMG9 384 aa18.89■□□□□ 0.61
SMC4-209ENST00000468653 SPATA21Q7Z572 469 aa18.89■□□□□ 0.61
SMC4-209ENST00000468653 TTC7BQ86TV6 843 aa18.89■□□□□ 0.61
SMC4-209ENST00000468653 SPATA6LQ8N4H0 392 aa18.89■□□□□ 0.61
SMC4-209ENST00000468653 ANKS4BQ8N8V4 417 aa18.89■□□□□ 0.61
SMC4-209ENST00000468653 HCAR2Q8TDS4 363 aa18.89■□□□□ 0.61
SMC4-209ENST00000468653 OR8D1Q8WZ84 308 aa18.89■□□□□ 0.61
SMC4-209ENST00000468653 TTC1Q99614 292 aa18.89■□□□□ 0.61
SMC4-209ENST00000468653 ASB8Q9H765 288 aa18.89■□□□□ 0.61
SMC4-209ENST00000468653 STARD13Q9Y3M8 1113 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms