RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 UNC5BQ8IZJ1 945 aa12.14□□□□□ -0.47
UBR4-211ENST00000467272 PGBD5Q8N414 524 aa12.14□□□□□ -0.47
UBR4-211ENST00000467272 SLC37A2Q8TED4 501 aa12.14□□□□□ -0.47
UBR4-211ENST00000467272 SCRN2Q96FV2 425 aa12.14□□□□□ -0.47
UBR4-211ENST00000467272 COX14Q96I36 57 aa12.14□□□□□ -0.47
UBR4-211ENST00000467272 ZNF599Q96NL3 588 aa12.14□□□□□ -0.47
UBR4-211ENST00000467272 PEBP4Q96S96 227 aa12.14□□□□□ -0.47
UBR4-211ENST00000467272 SYT11Q9BT88 431 aa12.14□□□□□ -0.47
UBR4-211ENST00000467272 EFHD1Q9BUP0 239 aa12.14□□□□□ -0.47
UBR4-211ENST00000467272 SELENOOQ9BVL4 669 aa12.14□□□□□ -0.47
UBR4-211ENST00000467272 GPN2Q9H9Y4 310 aaPredicted RBP12.14□□□□□ -0.47
UBR4-211ENST00000467272 APMAPQ9HDC9 416 aa12.14□□□□□ -0.47
UBR4-211ENST00000467272 SAMSN1Q9NSI8 373 aaKnown RBP12.14□□□□□ -0.47
UBR4-211ENST00000467272 KCNK4Q9NYG8 393 aa12.14□□□□□ -0.47
UBR4-211ENST00000467272 DONSONQ9NYP3 566 aa12.14□□□□□ -0.47
UBR4-211ENST00000467272 SIK3Q9Y2K2 1263 aa12.14□□□□□ -0.47
UBR4-211ENST00000467272 PCYT1BQ9Y5K3 369 aaPredicted RBP12.14□□□□□ -0.47
UBR4-211ENST00000467272 OTOGQ6ZRI0 2925 aa12.14□□□□□ -0.47
UBR4-211ENST00000467272 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.13□□□□□ -0.47
UBR4-211ENST00000467272 A0A1W2PQ67 120 aa12.13□□□□□ -0.47
UBR4-211ENST00000467272 TTC24A2A3L6 582 aaPredicted RBP12.13□□□□□ -0.47
UBR4-211ENST00000467272 NPIPB15A6NHN6 443 aaPredicted RBP12.13□□□□□ -0.47
UBR4-211ENST00000467272 FZD6O60353 706 aa12.13□□□□□ -0.47
UBR4-211ENST00000467272 TNFAIP3P21580 790 aa12.13□□□□□ -0.47
UBR4-211ENST00000467272 EEF1GP26641 437 aaKnown RBP12.13□□□□□ -0.47
UBR4-211ENST00000467272 HCAR3P49019 387 aa12.13□□□□□ -0.47
UBR4-211ENST00000467272 SCNN1BP51168 640 aa12.13□□□□□ -0.47
UBR4-211ENST00000467272 TPI1P60174 286 aa12.13□□□□□ -0.47
UBR4-211ENST00000467272 TRAF2Q12933 501 aa12.13□□□□□ -0.47
UBR4-211ENST00000467272 PEX6Q13608 980 aa12.13□□□□□ -0.47
UBR4-211ENST00000467272 LRP8Q14114 963 aa12.13□□□□□ -0.47
UBR4-211ENST00000467272 DPYSQ14117 519 aa12.13□□□□□ -0.47
UBR4-211ENST00000467272 C4orf17Q53FE4 359 aa12.13□□□□□ -0.47
UBR4-211ENST00000467272 LACTB2Q53H82 288 aaPredicted RBP12.13□□□□□ -0.47
UBR4-211ENST00000467272 HSP90AA4PQ58FG1 418 aa12.13□□□□□ -0.47
UBR4-211ENST00000467272 TCTN3Q6NUS6 607 aa12.13□□□□□ -0.47
UBR4-211ENST00000467272 SCYL2Q6P3W7 929 aa12.13□□□□□ -0.47
UBR4-211ENST00000467272 RFLNAQ6ZTI6 216 aa12.13□□□□□ -0.47
UBR4-211ENST00000467272 RFX8Q6ZV50 586 aa12.13□□□□□ -0.47
UBR4-211ENST00000467272 PIH1D2Q8WWB5 315 aa12.13□□□□□ -0.47
UBR4-211ENST00000467272 STARD8Q92502 1023 aa12.13□□□□□ -0.47
UBR4-211ENST00000467272 MCEEQ96PE7 176 aa12.13□□□□□ -0.47
UBR4-211ENST00000467272 CINPQ9BW66 212 aaPredicted RBP12.13□□□□□ -0.47
UBR4-211ENST00000467272 VPS16Q9H269 839 aa12.13□□□□□ -0.47
UBR4-211ENST00000467272 TRIT1Q9H3H1 467 aaKnown RBP12.13□□□□□ -0.47
UBR4-211ENST00000467272 SARS2Q9NP81 518 aaKnown RBP12.13□□□□□ -0.47
UBR4-211ENST00000467272 GPATCH2LQ9NWQ4 482 aa12.13□□□□□ -0.47
UBR4-211ENST00000467272 MOSPD1Q9UJG1 213 aa12.13□□□□□ -0.47
UBR4-211ENST00000467272 TP53TG5Q9Y2B4 290 aa12.13□□□□□ -0.47
UBR4-211ENST00000467272 PCDHGC4Q9Y5F7 938 aa12.13□□□□□ -0.47
UBR4-211ENST00000467272 GOLGA6L3A6NEY3 463 aa12.12□□□□□ -0.47
UBR4-211ENST00000467272 MTSS1O43312 755 aa12.12□□□□□ -0.47
UBR4-211ENST00000467272 STK17BO94768 372 aa12.12□□□□□ -0.47
UBR4-211ENST00000467272 ANKRD34CP0C6C1 535 aa12.12□□□□□ -0.47
UBR4-211ENST00000467272 PRKAR1AP10644 381 aa12.12□□□□□ -0.47
UBR4-211ENST00000467272 ERCC2P18074 760 aa12.12□□□□□ -0.47
UBR4-211ENST00000467272 ACTR1BP42025 376 aa12.12□□□□□ -0.47
UBR4-211ENST00000467272 RENBPP51606 427 aa12.12□□□□□ -0.47
UBR4-211ENST00000467272 ACTR1AP61163 376 aa12.12□□□□□ -0.47
UBR4-211ENST00000467272 POLR2FP61218 127 aaKnown RBP12.12□□□□□ -0.47
UBR4-211ENST00000467272 IHHQ14623 411 aa12.12□□□□□ -0.47
UBR4-211ENST00000467272 LBRQ14739 615 aaKnown RBP12.12□□□□□ -0.47
UBR4-211ENST00000467272 DEFB109BQ30KR1 87 aa12.12□□□□□ -0.47
UBR4-211ENST00000467272 CDKAL1Q5VV42 579 aa12.12□□□□□ -0.47
UBR4-211ENST00000467272 IYDQ6PHW0 289 aa12.12□□□□□ -0.47
UBR4-211ENST00000467272 CEACAM20Q6UY09 585 aa12.12□□□□□ -0.47
UBR4-211ENST00000467272 ZNF765Q7L2R6 523 aa12.12□□□□□ -0.47
UBR4-211ENST00000467272 TSPAN33Q86UF1 283 aa12.12□□□□□ -0.47
UBR4-211ENST00000467272 OR2M4Q96R27 311 aa12.12□□□□□ -0.47
UBR4-211ENST00000467272 NUDCD1Q96RS6 583 aa12.12□□□□□ -0.47
UBR4-211ENST00000467272 KCTD15Q96SI1 283 aaPredicted RBP12.12□□□□□ -0.47
UBR4-211ENST00000467272 CTRCQ99895 268 aa12.12□□□□□ -0.47
UBR4-211ENST00000467272 MGME1Q9BQP7 344 aa12.12□□□□□ -0.47
UBR4-211ENST00000467272 ABCG8Q9H221 673 aa12.12□□□□□ -0.47
UBR4-211ENST00000467272 NOD2Q9HC29 1040 aa12.12□□□□□ -0.47
UBR4-211ENST00000467272 CNOT6Q9ULM6 557 aaKnown RBP12.12□□□□□ -0.47
UBR4-211ENST00000467272 PHTF1Q9UMS5 762 aa12.12□□□□□ -0.47
UBR4-211ENST00000467272 AP4E1Q9UPM8 1137 aa12.12□□□□□ -0.47
UBR4-211ENST00000467272 KCTD3Q9Y597 815 aa12.12□□□□□ -0.47
UBR4-211ENST00000467272 MN1Q10571 1320 aaPredicted RBP12.11□□□□□ -0.47
UBR4-211ENST00000467272 EEF2KO00418 725 aaKnown RBP12.11□□□□□ -0.47
UBR4-211ENST00000467272 DNAJC6O75061 913 aa12.11□□□□□ -0.47
UBR4-211ENST00000467272 PGLSO95336 258 aa12.11□□□□□ -0.47
UBR4-211ENST00000467272 RECKO95980 971 aa12.11□□□□□ -0.47
UBR4-211ENST00000467272 PDGFAP04085 211 aa12.11□□□□□ -0.47
UBR4-211ENST00000467272 FURINP09958 794 aa12.11□□□□□ -0.47
UBR4-211ENST00000467272 EPHA4P54764 986 aa12.11□□□□□ -0.47
UBR4-211ENST00000467272 MC1RQ01726 317 aa12.11□□□□□ -0.47
UBR4-211ENST00000467272 PTSQ03393 145 aa12.11□□□□□ -0.47
UBR4-211ENST00000467272 MAMLD1Q13495 774 aa12.11□□□□□ -0.47
UBR4-211ENST00000467272 RALGPS1Q5JS13 557 aa12.11□□□□□ -0.47
UBR4-211ENST00000467272 TMCO4Q5TGY1 634 aa12.11□□□□□ -0.47
UBR4-211ENST00000467272 HIST2H2BCQ6DN03 193 aa12.11□□□□□ -0.47
UBR4-211ENST00000467272 DNAJC24Q6P3W2 148 aa12.11□□□□□ -0.47
UBR4-211ENST00000467272 ZNF761Q86XN6 746 aaPredicted RBP12.11□□□□□ -0.47
UBR4-211ENST00000467272 FAM129CQ86XR2 697 aa12.11□□□□□ -0.47
UBR4-211ENST00000467272 PSTKQ8IV42 348 aaKnown RBP12.11□□□□□ -0.47
UBR4-211ENST00000467272 MCOLN2Q8IZK6 566 aa12.11□□□□□ -0.47
UBR4-211ENST00000467272 OR10G6Q8NH81 332 aa12.11□□□□□ -0.47
UBR4-211ENST00000467272 KIAA1143Q96AT1 154 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms