RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 ADGRL3Q9HAR2 1447 aa3.62□□□□□ -1.83
XRN1-206ENST00000467077 CAMTA1Q9Y6Y1 1673 aa3.62□□□□□ -1.83
XRN1-206ENST00000467077 RALGAPBQ86X10 1494 aa3.62□□□□□ -1.83
XRN1-206ENST00000467077 ABCA3Q99758 1704 aa3.62□□□□□ -1.83
XRN1-206ENST00000467077 A0A0J9YWU9 116 aa3.62□□□□□ -1.83
XRN1-206ENST00000467077 OR6C68A6NDL8 312 aa3.62□□□□□ -1.83
XRN1-206ENST00000467077 J3KR12 359 aa3.62□□□□□ -1.83
XRN1-206ENST00000467077 CBX6O95503 412 aa3.62□□□□□ -1.83
XRN1-206ENST00000467077 LDHAP00338 332 aaKnown RBP3.62□□□□□ -1.83
XRN1-206ENST00000467077 TNNT1P13805 278 aa3.62□□□□□ -1.83
XRN1-206ENST00000467077 KRT9P35527 623 aa3.62□□□□□ -1.83
XRN1-206ENST00000467077 GJC1P36383 396 aa3.62□□□□□ -1.83
XRN1-206ENST00000467077 ACTR2P61160 394 aa3.62□□□□□ -1.83
XRN1-206ENST00000467077 FAM27E3Q08E93 113 aa3.62□□□□□ -1.83
XRN1-206ENST00000467077 IL13RA2Q14627 380 aa3.62□□□□□ -1.83
XRN1-206ENST00000467077 MOGAT3Q86VF5 341 aa3.62□□□□□ -1.83
XRN1-206ENST00000467077 MB21D2Q8IYB1 491 aaPredicted RBP3.62□□□□□ -1.83
XRN1-206ENST00000467077 AFG1LQ8WV93 481 aa3.62□□□□□ -1.83
XRN1-206ENST00000467077 NCSTNQ92542 709 aa3.62□□□□□ -1.83
XRN1-206ENST00000467077 ATOH1Q92858 354 aaPredicted RBP3.62□□□□□ -1.83
XRN1-206ENST00000467077 RILPL2Q969X0 211 aa3.62□□□□□ -1.83
XRN1-206ENST00000467077 RBM17Q96I25 401 aaKnown RBP3.62□□□□□ -1.83
XRN1-206ENST00000467077 ZNF583Q96ND8 569 aa3.62□□□□□ -1.83
XRN1-206ENST00000467077 FAM167BQ9BTA0 163 aa3.62□□□□□ -1.83
XRN1-206ENST00000467077 CTDSP1Q9GZU7 261 aa3.62□□□□□ -1.83
XRN1-206ENST00000467077 CXorf56Q9H5V9 222 aa3.62□□□□□ -1.83
XRN1-206ENST00000467077 TLR8Q9NR97 1041 aaKnown RBP3.62□□□□□ -1.83
XRN1-206ENST00000467077 GRHL1Q9NZI5 618 aa3.62□□□□□ -1.83
XRN1-206ENST00000467077 FBXO40Q9UH90 709 aa3.62□□□□□ -1.83
XRN1-206ENST00000467077 KCNS2Q9ULS6 477 aa3.62□□□□□ -1.83
XRN1-206ENST00000467077 DERAQ9Y315 318 aa3.62□□□□□ -1.83
XRN1-206ENST00000467077 COMMD10Q9Y6G5 202 aa3.62□□□□□ -1.83
XRN1-206ENST00000467077 USP32Q8NFA0 1604 aa3.62□□□□□ -1.83
XRN1-206ENST00000467077 METP08581 1390 aa3.62□□□□□ -1.83
XRN1-206ENST00000467077 CHD4Q14839 1912 aa3.62□□□□□ -1.83
XRN1-206ENST00000467077 ZNF318Q5VUA4 2279 aa3.61□□□□□ -1.83
XRN1-206ENST00000467077 MYOM2P54296 1465 aa3.61□□□□□ -1.83
XRN1-206ENST00000467077 CPED1A4D0V7 1026 aa3.61□□□□□ -1.83
XRN1-206ENST00000467077 B9A039 149 aa3.61□□□□□ -1.83
XRN1-206ENST00000467077 STX16-NPEPL1H3BU86 382 aa3.61□□□□□ -1.83
XRN1-206ENST00000467077 DVL1O14640 695 aa3.61□□□□□ -1.83
XRN1-206ENST00000467077 STX16O14662 325 aa3.61□□□□□ -1.83
XRN1-206ENST00000467077 INHBAP08476 426 aa3.61□□□□□ -1.83
XRN1-206ENST00000467077 GRK6P43250 576 aa3.61□□□□□ -1.83
XRN1-206ENST00000467077 PTPN9P43378 593 aa3.61□□□□□ -1.83
XRN1-206ENST00000467077 DVL1P1P54792 670 aaPredicted RBP3.61□□□□□ -1.83
XRN1-206ENST00000467077 GOLGA8FQ08AF8 430 aa3.61□□□□□ -1.83
XRN1-206ENST00000467077 OASLQ15646 514 aaKnown RBP3.61□□□□□ -1.83
XRN1-206ENST00000467077 ATP13A5Q4VNC0 1218 aa3.61□□□□□ -1.83
XRN1-206ENST00000467077 CBWD5Q5RIA9 395 aa3.61□□□□□ -1.83
XRN1-206ENST00000467077 GJB7Q6PEY0 223 aa3.61□□□□□ -1.83
XRN1-206ENST00000467077 UNC5CLQ8IV45 518 aa3.61□□□□□ -1.83
XRN1-206ENST00000467077 TMEM57Q8N5G2 664 aa3.61□□□□□ -1.83
XRN1-206ENST00000467077 SETD9Q8NE22 299 aa3.61□□□□□ -1.83
XRN1-206ENST00000467077 SPPL3Q8TCT6 385 aa3.61□□□□□ -1.83
XRN1-206ENST00000467077 MASTLQ96GX5 879 aa3.61□□□□□ -1.83
XRN1-206ENST00000467077 TRIM15Q9C019 465 aa3.61□□□□□ -1.83
XRN1-206ENST00000467077 FAM120CQ9NX05 1096 aaKnown RBP3.61□□□□□ -1.83
XRN1-206ENST00000467077 NLKQ9UBE8 527 aa3.61□□□□□ -1.83
XRN1-206ENST00000467077 HDAC6Q9UBN7 1215 aa3.61□□□□□ -1.83
XRN1-206ENST00000467077 CD207Q9UJ71 328 aa3.61□□□□□ -1.83
XRN1-206ENST00000467077 FEM1BQ9UK73 627 aa3.61□□□□□ -1.83
XRN1-206ENST00000467077 IFT172Q9UG01 1749 aa3.61□□□□□ -1.83
XRN1-206ENST00000467077 ANKRD50Q9ULJ7 1429 aa3.61□□□□□ -1.83
XRN1-206ENST00000467077 PXDNQ92626 1479 aa3.6□□□□□ -1.83
XRN1-206ENST00000467077 KIF1AQ12756 1690 aa3.6□□□□□ -1.83
XRN1-206ENST00000467077 RREB1Q92766 1687 aa3.6□□□□□ -1.83
XRN1-206ENST00000467077 ASPDHA6ND91 283 aa3.6□□□□□ -1.83
XRN1-206ENST00000467077 ZNF587BE7ETH6 402 aa3.6□□□□□ -1.83
XRN1-206ENST00000467077 BLOC1S5-TXNDC5H3BN57 136 aa3.6□□□□□ -1.83
XRN1-206ENST00000467077 RTL8CO15255 209 aa3.6□□□□□ -1.83
XRN1-206ENST00000467077 TPD52L2O43399 206 aaKnown RBP3.6□□□□□ -1.83
XRN1-206ENST00000467077 PCDH7O60245 1069 aa3.6□□□□□ -1.83
XRN1-206ENST00000467077 HBP1O60381 514 aa3.6□□□□□ -1.83
XRN1-206ENST00000467077 PATE4P0C8F1 98 aa3.6□□□□□ -1.83
XRN1-206ENST00000467077 CDH1P12830 882 aa3.6□□□□□ -1.83
XRN1-206ENST00000467077 RXRAP19793 462 aa3.6□□□□□ -1.83
XRN1-206ENST00000467077 RPE65Q16518 533 aa3.6□□□□□ -1.83
XRN1-206ENST00000467077 ADCK5Q3MIX3 580 aa3.6□□□□□ -1.83
XRN1-206ENST00000467077 CTXN3Q4LDR2 81 aa3.6□□□□□ -1.83
XRN1-206ENST00000467077 SH2D4BQ5SQS7 431 aa3.6□□□□□ -1.83
XRN1-206ENST00000467077 ANO1Q5XXA6 986 aa3.6□□□□□ -1.83
XRN1-206ENST00000467077 DENND1BQ6P3S1 775 aa3.6□□□□□ -1.83
XRN1-206ENST00000467077 SATL1Q86VE3 508 aa3.6□□□□□ -1.83
XRN1-206ENST00000467077 FTSJ3Q8IY81 847 aaKnown RBP3.6□□□□□ -1.83
XRN1-206ENST00000467077 OR4N2Q8NGD1 307 aa3.6□□□□□ -1.83
XRN1-206ENST00000467077 RNFT2Q96EX2 444 aa3.6□□□□□ -1.83
XRN1-206ENST00000467077 NPLQ9BXD5 320 aaPredicted RBP3.6□□□□□ -1.83
XRN1-206ENST00000467077 MVB12BQ9H7P6 319 aa3.6□□□□□ -1.83
XRN1-206ENST00000467077 RASSF1Q9NS23 344 aa3.6□□□□□ -1.83
XRN1-206ENST00000467077 DNAJC16Q9Y2G8 782 aa3.6□□□□□ -1.83
XRN1-206ENST00000467077 CLDN16Q9Y5I7 305 aa3.6□□□□□ -1.83
XRN1-206ENST00000467077 MORC2Q9Y6X9 1032 aaPredicted RBP3.6□□□□□ -1.83
XRN1-206ENST00000467077 UTRNP46939 3433 aa3.6□□□□□ -1.83
XRN1-206ENST00000467077 NUP188Q5SRE5 1749 aa3.6□□□□□ -1.83
XRN1-206ENST00000467077 NRAPQ86VF7 1730 aa3.6□□□□□ -1.83
XRN1-206ENST00000467077 NPHP3Q7Z494 1330 aa3.6□□□□□ -1.83
XRN1-206ENST00000467077 PPLO60437 1756 aa3.6□□□□□ -1.83
XRN1-206ENST00000467077 VPS8Q8N3P4 1428 aa3.6□□□□□ -1.83
XRN1-206ENST00000467077 ADGRL2O95490 1459 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms