RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 NEK6Q9HC98 313 aa18.05■□□□□ 0.48
SNAPC3-205ENST00000467062 TMLHEQ9NVH6 421 aa18.05■□□□□ 0.48
SNAPC3-205ENST00000467062 KLQ9UEF7 1012 aa18.05■□□□□ 0.48
SNAPC3-205ENST00000467062 ZCWPW2A0A1B0GU75 182 aa18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 SCO2O43819 266 aa18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 ABCB1P08183 1280 aaPredicted RBP18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 MBL2P11226 248 aaPredicted RBP18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 CCR10P46092 362 aa18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 TUFMP49411 452 aaKnown RBP18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 CDC20Q12834 499 aa18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 NAPRTQ6XQN6 538 aa18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 ERMP1Q7Z2K6 904 aa18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 CYGBQ8WWM9 190 aa18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 CEP295NLQ96MC4 621 aa18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 AGO3Q9H9G7 860 aaKnown RBP18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 RABL2AQ9UBK7 228 aaPredicted RBP18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 ZNF229Q9UJW7 825 aa18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 SAC3D1A6NKF1 404 aa18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 DLGAP1O14490 977 aa18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 TIPRLO75663 272 aa18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 B3GAT3O94766 335 aa18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 ALX3O95076 343 aa18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 MT-CYBP00156 380 aaPredicted RBP18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 KRT6AP02538 564 aa18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 KRT6BP04259 564 aa18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 NMBRP28336 390 aa18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 GP5P40197 560 aa18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 IST1P53990 364 aa18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 PRKAA2P54646 552 aa18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 STX1BP61266 288 aa18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 PHC1P78364 1004 aa18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 TRIM32Q13049 653 aa18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 SEMA3BQ13214 749 aa18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 PCBP1Q15365 356 aaKnown RBP eCLIP18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 CCDC58Q4VC31 144 aa18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 ZNF773Q6PK81 442 aa18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 KIAA0408Q6ZU52 694 aa18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 NEK10Q6ZWH5 1172 aa18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 CYS1Q717R9 158 aa18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 ARMC8Q8IUR7 673 aa18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 FAM20CQ8IXL6 584 aa18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 SPATA6LQ8N4H0 392 aa18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 SNX19Q92543 992 aa18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 MAGED4Q96JG8 741 aa18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 UPF3AQ9H1J1 476 aaKnown RBP18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 WDR55Q9H6Y2 383 aaPredicted RBP18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 FANCEQ9HB96 536 aa18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 ZBTB26Q9HCK0 441 aa18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 C8orf4Q9NR00 106 aa18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 IARS2Q9NSE4 1012 aaKnown RBP18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 BFARQ9NZS9 450 aa18.04■□□□□ 0.48
SNAPC3-205ENST00000467062 HEATR9A2RTY3 570 aa18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 DFFAO00273 331 aa18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 AP2A1O95782 977 aa18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 NTRK1P04629 796 aa18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 PRKACBP22694 351 aa18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 AVPR1AP37288 418 aa18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 NKX2-5P52952 324 aaPredicted RBP18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 IFITM3Q01628 133 aa18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 GPR162Q16538 588 aa18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 TRIM71Q2Q1W2 868 aaKnown RBP18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 LRIT3Q3SXY7 679 aa18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 CCDC81Q6ZN84 652 aa18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 BHLHA9Q7RTU4 235 aa18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 VMP1Q96GC9 406 aa18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 ZNF419Q96HQ0 510 aaPredicted RBP18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 NPAS2Q99743 824 aa18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 ILKAPQ9H0C8 392 aaPredicted RBP18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 ATXN3LQ9H3M9 355 aa18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 NOL6Q9H6R4 1146 aaKnown RBP18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 ATP13A3Q9H7F0 1226 aa18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 EIF2B3Q9NR50 452 aaKnown RBP18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 ARMC1Q9NVT9 282 aa18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 HHLA1C9JL84 531 aa18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 NEMP1O14524 444 aa18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 CHRNA1P02708 482 aa18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 ETFBP38117 255 aa18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 GLRBP48167 497 aa18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 HK2P52789 917 aa18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 MPP1Q00013 466 aa18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 EML3Q32P44 896 aa18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 CCNYL2Q5T2Q4 361 aa18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 GDF6Q6KF10 455 aaPredicted RBP18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 TAC4Q86UU9 113 aa18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 SLC22A16Q86VW1 577 aa18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 ZCCHC7Q8N3Z6 543 aaKnown RBP18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 C2orf69Q8N8R5 385 aa18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 BPIFB6Q8NFQ5 453 aa18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 MYLPFQ96A32 169 aa18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 C9orf16Q9BUW7 83 aa18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 OR2B2Q9GZK3 357 aa18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 UNC93B1Q9H1C4 597 aa18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 TRIT1Q9H3H1 467 aaKnown RBP18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 ZNF385DQ9H6B1 395 aa18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 LRRC40Q9H9A6 602 aa18.03■□□□□ 0.48
SNAPC3-205ENST00000467062 RNF103-CHMP3A0A140T963 221 aa18.02■□□□□ 0.48
SNAPC3-205ENST00000467062 HDAC3O15379 428 aa18.02■□□□□ 0.48
SNAPC3-205ENST00000467062 ITGB1P05556 798 aa18.02■□□□□ 0.48
SNAPC3-205ENST00000467062 SEL1L3Q68CR1 1132 aa18.02■□□□□ 0.48
SNAPC3-205ENST00000467062 LRRTM3Q86VH5 581 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms