RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 LRP4O75096 1905 aa17.47■□□□□ 0.39
COL7A1-206ENST00000466591 A0A0J9YYE9 177 aa17.46■□□□□ 0.39
COL7A1-206ENST00000466591 A0A1W2PNU3 283 aaPredicted RBP17.46■□□□□ 0.39
COL7A1-206ENST00000466591 LRRD1A4D1F6 860 aa17.46■□□□□ 0.39
COL7A1-206ENST00000466591 INPP4BO15327 924 aa17.46■□□□□ 0.39
COL7A1-206ENST00000466591 ECEL1O95672 775 aa17.46■□□□□ 0.39
COL7A1-206ENST00000466591 CPNE6O95741 557 aa17.46■□□□□ 0.39
COL7A1-206ENST00000466591 TRBC1P01850 177 aa17.46■□□□□ 0.39
COL7A1-206ENST00000466591 CEACAM5P06731 702 aa17.46■□□□□ 0.39
COL7A1-206ENST00000466591 PDHA1P08559 390 aa17.46■□□□□ 0.39
COL7A1-206ENST00000466591 AK4P27144 223 aaPredicted RBP17.46■□□□□ 0.39
COL7A1-206ENST00000466591 SLC18A3Q16572 532 aa17.46■□□□□ 0.39
COL7A1-206ENST00000466591 ATP13A4Q4VNC1 1196 aa17.46■□□□□ 0.39
COL7A1-206ENST00000466591 CLEC14AQ86T13 490 aa17.46■□□□□ 0.39
COL7A1-206ENST00000466591 CCDC13Q8IYE1 715 aa17.46■□□□□ 0.39
COL7A1-206ENST00000466591 OR8K1Q8NGG5 319 aa17.46■□□□□ 0.39
COL7A1-206ENST00000466591 GPBAR1Q8TDU6 330 aa17.46■□□□□ 0.39
COL7A1-206ENST00000466591 PIH1D2Q8WWB5 315 aa17.46■□□□□ 0.39
COL7A1-206ENST00000466591 AHCYL2Q96HN2 611 aaKnown RBP17.46■□□□□ 0.39
COL7A1-206ENST00000466591 MCCC1Q96RQ3 725 aaPredicted RBP17.46■□□□□ 0.39
COL7A1-206ENST00000466591 CCNL2Q96S94 520 aaPredicted RBP17.46■□□□□ 0.39
COL7A1-206ENST00000466591 ADGRE3Q9BY15 652 aa17.46■□□□□ 0.39
COL7A1-206ENST00000466591 FRMD8Q9BZ67 464 aaPredicted RBP17.46■□□□□ 0.39
COL7A1-206ENST00000466591 ABCG8Q9H221 673 aa17.46■□□□□ 0.39
COL7A1-206ENST00000466591 STN1Q9H668 368 aaKnown RBP17.46■□□□□ 0.39
COL7A1-206ENST00000466591 RDH14Q9HBH5 336 aa17.46■□□□□ 0.39
COL7A1-206ENST00000466591 PCDH9Q9HC56 1237 aa17.46■□□□□ 0.39
COL7A1-206ENST00000466591 SPATS2LQ9NUQ6 558 aaKnown RBP17.46■□□□□ 0.39
COL7A1-206ENST00000466591 PKD2L2Q9NZM6 624 aa17.46■□□□□ 0.39
COL7A1-206ENST00000466591 TMEM98Q9Y2Y6 226 aa17.46■□□□□ 0.39
COL7A1-206ENST00000466591 HEY1Q9Y5J3 304 aa17.46■□□□□ 0.39
COL7A1-206ENST00000466591 ASXL3Q9C0F0 2248 aa17.45■□□□□ 0.38
COL7A1-206ENST00000466591 RP1P56715 2156 aa17.45■□□□□ 0.38
COL7A1-206ENST00000466591 C1orf232A0A0U1RR37 186 aa17.45■□□□□ 0.38
COL7A1-206ENST00000466591 IVLP07476 585 aa17.45■□□□□ 0.38
COL7A1-206ENST00000466591 TNNT1P13805 278 aa17.45■□□□□ 0.38
COL7A1-206ENST00000466591 IL4RP24394 825 aa17.45■□□□□ 0.38
COL7A1-206ENST00000466591 TEAD1P28347 426 aa17.45■□□□□ 0.38
COL7A1-206ENST00000466591 ADCY8P40145 1251 aa17.45■□□□□ 0.38
COL7A1-206ENST00000466591 TNNT3P45378 269 aaPredicted RBP17.45■□□□□ 0.38
COL7A1-206ENST00000466591 OR1D5P58170 312 aa17.45■□□□□ 0.38
COL7A1-206ENST00000466591 CTBSQ01459 385 aa17.45■□□□□ 0.38
COL7A1-206ENST00000466591 CFHR1Q03591 330 aa17.45■□□□□ 0.38
COL7A1-206ENST00000466591 DPTQ07507 201 aa17.45■□□□□ 0.38
COL7A1-206ENST00000466591 AP1B1Q10567 949 aa17.45■□□□□ 0.38
COL7A1-206ENST00000466591 PTPRRQ15256 657 aa17.45■□□□□ 0.38
COL7A1-206ENST00000466591 ADAMTSL4Q6UY14 1074 aa17.45■□□□□ 0.38
COL7A1-206ENST00000466591 USP53Q70EK8 1073 aa17.45■□□□□ 0.38
COL7A1-206ENST00000466591 TRIM74Q86UV6 250 aa17.45■□□□□ 0.38
COL7A1-206ENST00000466591 SFTPA2Q8IWL1 248 aa17.45■□□□□ 0.38
COL7A1-206ENST00000466591 ZSCAN1Q8NBB4 408 aa17.45■□□□□ 0.38
COL7A1-206ENST00000466591 CCDC112Q8NEF3 446 aa17.45■□□□□ 0.38
COL7A1-206ENST00000466591 EXD1Q8NHP7 514 aa17.45■□□□□ 0.38
COL7A1-206ENST00000466591 CCDC42Q96M95 316 aa17.45■□□□□ 0.38
COL7A1-206ENST00000466591 ZNHIT2Q9UHR6 403 aa17.45■□□□□ 0.38
COL7A1-206ENST00000466591 PCDHGA7Q9Y5G6 932 aa17.45■□□□□ 0.38
COL7A1-206ENST00000466591 A0A0U1RQS6 177 aa17.44■□□□□ 0.38
COL7A1-206ENST00000466591 SLC4A1P02730 911 aa17.44■□□□□ 0.38
COL7A1-206ENST00000466591 FGF1P05230 155 aa17.44■□□□□ 0.38
COL7A1-206ENST00000466591 HLA-DQB2P05538 268 aa17.44■□□□□ 0.38
COL7A1-206ENST00000466591 ITIH1P19827 911 aa17.44■□□□□ 0.38
COL7A1-206ENST00000466591 MAN1A1P33908 653 aa17.44■□□□□ 0.38
COL7A1-206ENST00000466591 CD86P42081 329 aa17.44■□□□□ 0.38
COL7A1-206ENST00000466591 TAS2R40P59535 323 aa17.44■□□□□ 0.38
COL7A1-206ENST00000466591 RPL26P61254 145 aaKnown RBP17.44■□□□□ 0.38
COL7A1-206ENST00000466591 GBE1Q04446 702 aa17.44■□□□□ 0.38
COL7A1-206ENST00000466591 CLN3Q13286 438 aa17.44■□□□□ 0.38
COL7A1-206ENST00000466591 SKOR2Q2VWA4 1001 aaPredicted RBP17.44■□□□□ 0.38
COL7A1-206ENST00000466591 MANEAQ5SRI9 462 aa17.44■□□□□ 0.38
COL7A1-206ENST00000466591 ZNF765Q7L2R6 523 aa17.44■□□□□ 0.38
COL7A1-206ENST00000466591 ZNF605Q86T29 641 aa17.44■□□□□ 0.38
COL7A1-206ENST00000466591 NRSN1Q8IZ57 195 aa17.44■□□□□ 0.38
COL7A1-206ENST00000466591 FAM71BQ8TC56 605 aa17.44■□□□□ 0.38
COL7A1-206ENST00000466591 LRRN4Q8WUT4 740 aa17.44■□□□□ 0.38
COL7A1-206ENST00000466591 MAML1Q92585 1016 aa17.44■□□□□ 0.38
COL7A1-206ENST00000466591 SCAMP4Q969E2 229 aa17.44■□□□□ 0.38
COL7A1-206ENST00000466591 TSGA13Q96PP4 275 aa17.44■□□□□ 0.38
COL7A1-206ENST00000466591 SLC38A3Q99624 504 aa17.44■□□□□ 0.38
COL7A1-206ENST00000466591 RIOK2Q9BVS4 552 aaKnown RBP17.44■□□□□ 0.38
COL7A1-206ENST00000466591 TDRD1Q9BXT4 1180 aaKnown RBP17.44■□□□□ 0.38
COL7A1-206ENST00000466591 PACSIN1Q9BY11 444 aa17.44■□□□□ 0.38
COL7A1-206ENST00000466591 KCNK4Q9NYG8 393 aa17.44■□□□□ 0.38
COL7A1-206ENST00000466591 RPL26L1Q9UNX3 145 aaKnown RBP17.44■□□□□ 0.38
COL7A1-206ENST00000466591 SLC17A4Q9Y2C5 497 aa17.44■□□□□ 0.38
COL7A1-206ENST00000466591 APOL1O14791 398 aa17.43■□□□□ 0.38
COL7A1-206ENST00000466591 PPP1R12AO14974 1030 aaPredicted RBP17.43■□□□□ 0.38
COL7A1-206ENST00000466591 CLDN7O95471 211 aa17.43■□□□□ 0.38
COL7A1-206ENST00000466591 JCHAINP01591 159 aa17.43■□□□□ 0.38
COL7A1-206ENST00000466591 KRT1P04264 644 aa17.43■□□□□ 0.38
COL7A1-206ENST00000466591 TMEM253P0C7T8 217 aa17.43■□□□□ 0.38
COL7A1-206ENST00000466591 CCDC70Q6NSX1 233 aa17.43■□□□□ 0.38
COL7A1-206ENST00000466591 TECPR1Q7Z6L1 1165 aa17.43■□□□□ 0.38
COL7A1-206ENST00000466591 RFX6Q8HWS3 928 aa17.43■□□□□ 0.38
COL7A1-206ENST00000466591 HDAC11Q96DB2 347 aa17.43■□□□□ 0.38
COL7A1-206ENST00000466591 ARHGAP9Q9BRR9 750 aa17.43■□□□□ 0.38
COL7A1-206ENST00000466591 MLPHQ9BV36 600 aaPredicted RBP17.43■□□□□ 0.38
COL7A1-206ENST00000466591 PPIL1Q9Y3C6 166 aa17.43■□□□□ 0.38
COL7A1-206ENST00000466591 TRBV23OR9-2A0A075B6M9 112 aa17.42■□□□□ 0.38
COL7A1-206ENST00000466591 KCNK1O00180 336 aa17.42■□□□□ 0.38
COL7A1-206ENST00000466591 LIPCP11150 499 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms