RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 FAM133BQ5BKY9 247 aaKnown RBP4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 COLEC12Q5KU26 742 aa4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 LRIF1Q5T3J3 769 aa4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 KRT79Q5XKE5 535 aa4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 C11orf87Q6NUJ2 197 aa4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 DPY19L2P1Q6NXN4 242 aa4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 CRELD2Q6UXH1 353 aaPredicted RBP4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 COLCA1Q6ZS62 124 aa4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 Q6ZTK2 550 aa4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 DNAAF5Q86Y56 855 aa4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 ARID3BQ8IVW6 561 aaPredicted RBP4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 SCML4Q8N228 414 aa4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 AVL9Q8NBF6 648 aa4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 OR8K5Q8NH50 307 aa4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 MAGEC3Q8TD91 643 aa4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 APOLD1Q96LR9 279 aa4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 NUDCD1Q96RS6 583 aa4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 FIZ1Q96SL8 496 aa4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 SRSF8Q9BRL6 282 aaKnown RBP4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 SIL1Q9H173 461 aa4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 HRH4Q9H3N8 390 aa4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 SLC28A3Q9HAS3 691 aa4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 HIF1ANQ9NWT6 349 aa4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 MTMR10Q9NXD2 777 aa4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 ARHGEF38Q9NXL2 777 aa4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 ACSL5Q9ULC5 683 aa4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 ATXN2Q99700 1313 aaKnown RBP4.42□□□□□ -1.7
CDC42BPA-211ENST00000466538 IGHV4-28A0A0C4DH34 117 aa4.41□□□□□ -1.7
CDC42BPA-211ENST00000466538 KANSL1LA0AUZ9 987 aa4.41□□□□□ -1.7
CDC42BPA-211ENST00000466538 WDR91A4D1P6 747 aa4.41□□□□□ -1.7
CDC42BPA-211ENST00000466538 OR6C75A6NL08 312 aa4.41□□□□□ -1.7
CDC42BPA-211ENST00000466538 BECN2A8MW95 431 aa4.41□□□□□ -1.7
CDC42BPA-211ENST00000466538 PAPSS1O43252 624 aaPredicted RBP4.41□□□□□ -1.7
CDC42BPA-211ENST00000466538 DNTTP04053 509 aa4.41□□□□□ -1.7
CDC42BPA-211ENST00000466538 ANXA7P20073 488 aaKnown RBP4.41□□□□□ -1.7
CDC42BPA-211ENST00000466538 RRM1P23921 792 aa4.41□□□□□ -1.7
CDC42BPA-211ENST00000466538 PIGAP37287 484 aa4.41□□□□□ -1.7
CDC42BPA-211ENST00000466538 COMPP49747 757 aaPredicted RBP4.41□□□□□ -1.7
CDC42BPA-211ENST00000466538 STAT2P52630 851 aa4.41□□□□□ -1.7
CDC42BPA-211ENST00000466538 TRAF1Q13077 416 aa4.41□□□□□ -1.7
CDC42BPA-211ENST00000466538 KCNC3Q14003 757 aa4.41□□□□□ -1.7
CDC42BPA-211ENST00000466538 PNLIPRP3Q17RR3 467 aa4.41□□□□□ -1.7
CDC42BPA-211ENST00000466538 MMEL1Q495T6 779 aa4.41□□□□□ -1.7
CDC42BPA-211ENST00000466538 FNBP1LQ5T0N5 605 aa4.41□□□□□ -1.7
CDC42BPA-211ENST00000466538 SLC30A6Q6NXT4 461 aa4.41□□□□□ -1.7
CDC42BPA-211ENST00000466538 TAOK1Q7L7X3 1001 aa4.41□□□□□ -1.7
CDC42BPA-211ENST00000466538 IL17RCQ8NAC3 791 aa4.41□□□□□ -1.7
CDC42BPA-211ENST00000466538 POMGNT2Q8NAT1 580 aa4.41□□□□□ -1.7
CDC42BPA-211ENST00000466538 CENPOQ9BU64 300 aa4.41□□□□□ -1.7
CDC42BPA-211ENST00000466538 KIFC3Q9BVG8 833 aa4.41□□□□□ -1.7
CDC42BPA-211ENST00000466538 TMEM39BQ9GZU3 492 aa4.41□□□□□ -1.7
CDC42BPA-211ENST00000466538 SPRTNQ9H040 489 aaPredicted RBP4.41□□□□□ -1.7
CDC42BPA-211ENST00000466538 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.41□□□□□ -1.7
CDC42BPA-211ENST00000466538 CFDP1Q9UEE9 299 aaPredicted RBP4.41□□□□□ -1.7
CDC42BPA-211ENST00000466538 OR14J1Q9UGF5 321 aa4.41□□□□□ -1.7
CDC42BPA-211ENST00000466538 VCYO14598 125 aa4.4□□□□□ -1.71
CDC42BPA-211ENST00000466538 DKC1O60832 514 aaKnown RBP eCLIP4.4□□□□□ -1.71
CDC42BPA-211ENST00000466538 AVILO75366 819 aa4.4□□□□□ -1.71
CDC42BPA-211ENST00000466538 CYC1P08574 325 aa4.4□□□□□ -1.71
CDC42BPA-211ENST00000466538 STX2P32856 288 aa4.4□□□□□ -1.71
CDC42BPA-211ENST00000466538 RPL3P39023 403 aaKnown RBP4.4□□□□□ -1.71
CDC42BPA-211ENST00000466538 NR4A2P43354 598 aa4.4□□□□□ -1.71
CDC42BPA-211ENST00000466538 FASLGP48023 281 aa4.4□□□□□ -1.71
CDC42BPA-211ENST00000466538 RFX5P48382 616 aaPredicted RBP4.4□□□□□ -1.71
CDC42BPA-211ENST00000466538 GPR143P51810 404 aa4.4□□□□□ -1.71
CDC42BPA-211ENST00000466538 ECT2LQ008S8 904 aa4.4□□□□□ -1.71
CDC42BPA-211ENST00000466538 DSC1Q08554 894 aa4.4□□□□□ -1.71
CDC42BPA-211ENST00000466538 TRAF2Q12933 501 aa4.4□□□□□ -1.71
CDC42BPA-211ENST00000466538 PRPF4BQ13523 1007 aaKnown RBP4.4□□□□□ -1.71
CDC42BPA-211ENST00000466538 TNFAIP1Q13829 316 aa4.4□□□□□ -1.71
CDC42BPA-211ENST00000466538 KLF9Q13886 244 aaPredicted RBP4.4□□□□□ -1.71
CDC42BPA-211ENST00000466538 ETFDHQ16134 617 aa4.4□□□□□ -1.71
CDC42BPA-211ENST00000466538 CCDC142Q17RM4 750 aa4.4□□□□□ -1.71
CDC42BPA-211ENST00000466538 ZNF805Q5CZA5 627 aa4.4□□□□□ -1.71
CDC42BPA-211ENST00000466538 BMP2KLQ5H9B9 411 aa4.4□□□□□ -1.71
CDC42BPA-211ENST00000466538 DAB2IPQ5VWQ8 1189 aa4.4□□□□□ -1.71
CDC42BPA-211ENST00000466538 HIST2H2BCQ6DN03 193 aa4.4□□□□□ -1.71
CDC42BPA-211ENST00000466538 HIST2H2BDQ6DRA6 164 aa4.4□□□□□ -1.71
CDC42BPA-211ENST00000466538 ZNF280DQ6N043 979 aa4.4□□□□□ -1.71
CDC42BPA-211ENST00000466538 DSELQ8IZU8 1212 aa4.4□□□□□ -1.71
CDC42BPA-211ENST00000466538 MIGA1Q8NAN2 632 aa4.4□□□□□ -1.71
CDC42BPA-211ENST00000466538 NSMCE1Q8WV22 266 aa4.4□□□□□ -1.71
CDC42BPA-211ENST00000466538 HMCESQ96FZ2 354 aa4.4□□□□□ -1.71
CDC42BPA-211ENST00000466538 DACH2Q96NX9 599 aa4.4□□□□□ -1.71
CDC42BPA-211ENST00000466538 KCNN2Q9H2S1 579 aa4.4□□□□□ -1.71
CDC42BPA-211ENST00000466538 DENND2DQ9H6A0 471 aaPredicted RBP4.4□□□□□ -1.71
CDC42BPA-211ENST00000466538 PPP1R3EQ9H7J1 279 aa4.4□□□□□ -1.71
CDC42BPA-211ENST00000466538 EPB41L5Q9HCM4 733 aa4.4□□□□□ -1.71
CDC42BPA-211ENST00000466538 MMP25Q9NPA2 562 aa4.4□□□□□ -1.71
CDC42BPA-211ENST00000466538 ACSS1Q9NUB1 689 aaPredicted RBP4.4□□□□□ -1.71
CDC42BPA-211ENST00000466538 ELOVL5Q9NYP7 299 aa4.4□□□□□ -1.71
CDC42BPA-211ENST00000466538 WSB2Q9NYS7 404 aaPredicted RBP4.4□□□□□ -1.71
CDC42BPA-211ENST00000466538 FZD10Q9ULW2 581 aa4.4□□□□□ -1.71
CDC42BPA-211ENST00000466538 CDC14AQ9UNH5 594 aa4.4□□□□□ -1.71
CDC42BPA-211ENST00000466538 CLIC4Q9Y696 253 aa4.4□□□□□ -1.71
CDC42BPA-211ENST00000466538 GOLGA6L9A6NEM1 432 aa4.39□□□□□ -1.71
CDC42BPA-211ENST00000466538 DNAJC9-AS1A6NH13 148 aa4.39□□□□□ -1.71
CDC42BPA-211ENST00000466538 A8MV72 311 aaPredicted RBP4.39□□□□□ -1.71
CDC42BPA-211ENST00000466538 J3KR12 359 aa4.39□□□□□ -1.71
CDC42BPA-211ENST00000466538 M0QZ24 198 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms