RNA–Protein interactions for RNA: ENST00000466045.1

CDHR3-203, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-203ENST00000466045 ITGB1P05556 798 aa9.46□□□□□ -0.9
CDHR3-203ENST00000466045 P4HBP07237 508 aaKnown RBP9.46□□□□□ -0.9
CDHR3-203ENST00000466045 CYP3A4P08684 503 aa9.46□□□□□ -0.9
CDHR3-203ENST00000466045 TMEM191BP0C7N4 346 aa9.46□□□□□ -0.9
CDHR3-203ENST00000466045 SNHG28P0DPA3 235 aa9.46□□□□□ -0.9
CDHR3-203ENST00000466045 KITP10721 976 aa9.46□□□□□ -0.9
CDHR3-203ENST00000466045 GARSP41250 739 aaKnown RBP9.46□□□□□ -0.9
CDHR3-203ENST00000466045 IDH3AP50213 366 aa9.46□□□□□ -0.9
CDHR3-203ENST00000466045 AANATQ16613 207 aa9.46□□□□□ -0.9
CDHR3-203ENST00000466045 DCAF8Q5TAQ9 597 aa9.46□□□□□ -0.9
CDHR3-203ENST00000466045 PRMT9Q6P2P2 845 aa9.46□□□□□ -0.9
CDHR3-203ENST00000466045 ZNF782Q6ZMW2 699 aaPredicted RBP9.46□□□□□ -0.9
CDHR3-203ENST00000466045 CFAP77Q6ZQR2 320 aa9.46□□□□□ -0.9
CDHR3-203ENST00000466045 PHC2Q8IXK0 858 aa9.46□□□□□ -0.9
CDHR3-203ENST00000466045 NIM1KQ8IY84 436 aa9.46□□□□□ -0.9
CDHR3-203ENST00000466045 TXNDC5Q8NBS9 432 aaKnown RBP9.46□□□□□ -0.9
CDHR3-203ENST00000466045 OR7G3Q8NG95 312 aa9.46□□□□□ -0.9
CDHR3-203ENST00000466045 DNAJA4Q8WW22 397 aaPredicted RBP9.46□□□□□ -0.9
CDHR3-203ENST00000466045 NELL1Q92832 810 aa9.46□□□□□ -0.9
CDHR3-203ENST00000466045 FUBP1Q96AE4 644 aaKnown RBP9.46□□□□□ -0.9
CDHR3-203ENST00000466045 NXNL1Q96CM4 212 aa9.46□□□□□ -0.9
CDHR3-203ENST00000466045 SGTBQ96EQ0 304 aa9.46□□□□□ -0.9
CDHR3-203ENST00000466045 EXOC2Q96KP1 924 aa9.46□□□□□ -0.9
CDHR3-203ENST00000466045 TMEM68Q96MH6 324 aa9.46□□□□□ -0.9
CDHR3-203ENST00000466045 SERPINB11Q96P15 392 aa9.46□□□□□ -0.9
CDHR3-203ENST00000466045 PLIN2Q99541 437 aa9.46□□□□□ -0.9
CDHR3-203ENST00000466045 KLF6Q99612 283 aaPredicted RBP9.46□□□□□ -0.9
CDHR3-203ENST00000466045 PELOQ9BRX2 385 aaKnown RBP9.46□□□□□ -0.9
CDHR3-203ENST00000466045 CPVLQ9H3G5 476 aa9.46□□□□□ -0.9
CDHR3-203ENST00000466045 COG4Q9H9E3 785 aa9.46□□□□□ -0.9
CDHR3-203ENST00000466045 BRD7Q9NPI1 651 aa9.46□□□□□ -0.9
CDHR3-203ENST00000466045 MTMR4Q9NYA4 1195 aa9.46□□□□□ -0.9
CDHR3-203ENST00000466045 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.46□□□□□ -0.9
CDHR3-203ENST00000466045 MALT1Q9UDY8 824 aa9.46□□□□□ -0.9
CDHR3-203ENST00000466045 ANAPC2Q9UJX6 822 aa9.46□□□□□ -0.9
CDHR3-203ENST00000466045 AJAP1Q9UKB5 411 aaPredicted RBP9.46□□□□□ -0.9
CDHR3-203ENST00000466045 ACSL5Q9ULC5 683 aa9.46□□□□□ -0.9
CDHR3-203ENST00000466045 SPATA2Q9UM82 520 aa9.46□□□□□ -0.9
CDHR3-203ENST00000466045 MAGED2Q9UNF1 606 aaPredicted RBP9.46□□□□□ -0.9
CDHR3-203ENST00000466045 PCDHB12Q9Y5F1 795 aa9.46□□□□□ -0.9
CDHR3-203ENST00000466045 USP17L5A8MUK1 530 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 C9IYK1 514 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 COPEO14579 308 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 ZNF195O14628 629 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 BPGMP07738 259 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 SOX11P35716 441 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 STARP49675 285 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 ACY1Q03154 408 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 KLF1Q13351 362 aaPredicted RBP9.45□□□□□ -0.9
CDHR3-203ENST00000466045 PLD1Q13393 1074 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 PCBP1Q15365 356 aaKnown RBP eCLIP9.45□□□□□ -0.9
CDHR3-203ENST00000466045 SKIV2LQ15477 1246 aaKnown RBP9.45□□□□□ -0.9
CDHR3-203ENST00000466045 TMEM119Q4V9L6 283 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 NXNL2Q5VZ03 156 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 LIPIQ6XZB0 460 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 UTS2BQ765I0 119 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 RP9Q8TA86 221 aaKnown RBP9.45□□□□□ -0.9
CDHR3-203ENST00000466045 SETD6Q8TBK2 473 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 SPATA18Q8TC71 538 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 RAD54LQ92698 747 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 RPL3LQ92901 407 aaKnown RBP9.45□□□□□ -0.9
CDHR3-203ENST00000466045 KATNAL1Q9BW62 490 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 SHARPINQ9H0F6 387 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 LDAHQ9H6V9 325 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 CATSPERBQ9H7T0 1116 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 KCNH7Q9NS40 1196 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 NAALAD2Q9Y3Q0 740 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 MFHAS1Q9Y4C4 1052 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 LOC100653049A0A140TA62 436 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 A0A1B0GTQ1 180 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 RGSL1A5PLK6 1076 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 AGAP5A6NIR3 686 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 TRIM49D1C9J1S8 452 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 H0Y626 953 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 HS6ST1O60243 411 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 KRT34O76011 436 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 RHOBTB1O94844 696 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 TNNI3P19429 210 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 TECP42680 631 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 SEPHS1P49903 392 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 NUDT2P50583 147 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 DCDC1P59894 354 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 GABARAPL2P60520 117 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 GPC5P78333 572 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 CAP1Q01518 475 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 PRKCDQ05655 676 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 FSTL1Q12841 308 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 CDH17Q12864 832 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 TAF1CQ15572 869 aaPredicted RBP9.45□□□□□ -0.9
CDHR3-203ENST00000466045 CALCRLQ16602 461 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 BMT2Q1RMZ1 405 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 RBM48Q5RL73 367 aaKnown RBP9.45□□□□□ -0.9
CDHR3-203ENST00000466045 FAXCQ5TGI0 409 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 MROH9Q5TGP6 573 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 TTC39BQ5VTQ0 682 aaPredicted RBP9.45□□□□□ -0.9
CDHR3-203ENST00000466045 DRICH1Q6PGQ1 229 aaPredicted RBP9.45□□□□□ -0.9
CDHR3-203ENST00000466045 MOXD1Q6UVY6 613 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 MAVSQ7Z434 540 aa9.45□□□□□ -0.9
CDHR3-203ENST00000466045 GLB1L3Q8NCI6 653 aaPredicted RBP9.45□□□□□ -0.9
CDHR3-203ENST00000466045 C3orf58Q8NDZ4 430 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms