RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 BCL7BQ9BQE9 202 aa19.71■□□□□ 0.75
SDF4-205ENST00000465727 SLC2A6Q9UGQ3 507 aa19.71■□□□□ 0.75
SDF4-205ENST00000465727 WDR90Q96KV7 1748 aa19.71■□□□□ 0.75
SDF4-205ENST00000465727 I6L893 689 aaPredicted RBP19.71■□□□□ 0.75
SDF4-205ENST00000465727 KDM1AO60341 852 aa19.71■□□□□ 0.75
SDF4-205ENST00000465727 VPS4BO75351 444 aa19.71■□□□□ 0.75
SDF4-205ENST00000465727 MTHFD1P11586 935 aaKnown RBP19.71■□□□□ 0.75
SDF4-205ENST00000465727 LBPP18428 481 aa19.71■□□□□ 0.75
SDF4-205ENST00000465727 CCNCP24863 283 aa19.71■□□□□ 0.75
SDF4-205ENST00000465727 MRPL19P49406 292 aaKnown RBP19.71■□□□□ 0.75
SDF4-205ENST00000465727 MAPK10P53779 464 aa19.71■□□□□ 0.75
SDF4-205ENST00000465727 ARSFP54793 590 aa19.71■□□□□ 0.75
SDF4-205ENST00000465727 GRIK2Q13002 908 aa19.71■□□□□ 0.75
SDF4-205ENST00000465727 FXNQ16595 210 aa19.71■□□□□ 0.75
SDF4-205ENST00000465727 FSCN1Q16658 493 aaKnown RBP19.71■□□□□ 0.75
SDF4-205ENST00000465727 DEPDC1Q5TB30 811 aa19.71■□□□□ 0.75
SDF4-205ENST00000465727 FAM35AQ86V20 835 aa19.71■□□□□ 0.75
SDF4-205ENST00000465727 PHYKPLQ8IUZ5 450 aa19.71■□□□□ 0.75
SDF4-205ENST00000465727 B3GALNT2Q8NCR0 500 aa19.71■□□□□ 0.75
SDF4-205ENST00000465727 SPATA22Q8NHS9 363 aa19.71■□□□□ 0.75
SDF4-205ENST00000465727 VMP1Q96GC9 406 aa19.71■□□□□ 0.75
SDF4-205ENST00000465727 SYT17Q9BSW7 474 aa19.71■□□□□ 0.75
SDF4-205ENST00000465727 FICDQ9BVA6 458 aa19.71■□□□□ 0.75
SDF4-205ENST00000465727 TSPYL2Q9H2G4 693 aaPredicted RBP19.71■□□□□ 0.75
SDF4-205ENST00000465727 SLC52A3Q9NQ40 469 aa19.71■□□□□ 0.75
SDF4-205ENST00000465727 HACL1Q9UJ83 578 aa19.71■□□□□ 0.75
SDF4-205ENST00000465727 UBQLN1Q9UMX0 589 aaKnown RBP19.71■□□□□ 0.75
SDF4-205ENST00000465727 A0A1W2PP18 115 aa19.7■□□□□ 0.74
SDF4-205ENST00000465727 PIRO00625 290 aa19.7■□□□□ 0.74
SDF4-205ENST00000465727 HPRP00739 348 aa19.7■□□□□ 0.74
SDF4-205ENST00000465727 F9P00740 461 aa19.7■□□□□ 0.74
SDF4-205ENST00000465727 CD4P01730 458 aa19.7■□□□□ 0.74
SDF4-205ENST00000465727 ADRA1AP35348 466 aa19.7■□□□□ 0.74
SDF4-205ENST00000465727 TRIM32Q13049 653 aa19.7■□□□□ 0.74
SDF4-205ENST00000465727 RPS6KA2Q15349 733 aa19.7■□□□□ 0.74
SDF4-205ENST00000465727 UNC50Q53HI1 259 aa19.7■□□□□ 0.74
SDF4-205ENST00000465727 AGAP7PQ5VUJ5 663 aa19.7■□□□□ 0.74
SDF4-205ENST00000465727 ZNF280DQ6N043 979 aa19.7■□□□□ 0.74
SDF4-205ENST00000465727 NEK10Q6ZWH5 1172 aa19.7■□□□□ 0.74
SDF4-205ENST00000465727 LIMS2Q7Z4I7 341 aa19.7■□□□□ 0.74
SDF4-205ENST00000465727 BPIFB1Q8TDL5 484 aa19.7■□□□□ 0.74
SDF4-205ENST00000465727 STARD8Q92502 1023 aa19.7■□□□□ 0.74
SDF4-205ENST00000465727 FKBP10Q96AY3 582 aa19.7■□□□□ 0.74
SDF4-205ENST00000465727 C18orf25Q96B23 403 aaPredicted RBP19.7■□□□□ 0.74
SDF4-205ENST00000465727 SOX17Q9H6I2 414 aaPredicted RBP19.7■□□□□ 0.74
SDF4-205ENST00000465727 FZD1Q9UP38 647 aa19.7■□□□□ 0.74
SDF4-205ENST00000465727 PCDHGA11Q9Y5H2 935 aa19.7■□□□□ 0.74
SDF4-205ENST00000465727 GOLGB1Q14789 3259 aaKnown RBP19.7■□□□□ 0.74
SDF4-205ENST00000465727 NRCAMQ92823 1304 aa19.7■□□□□ 0.74
SDF4-205ENST00000465727 H0Y858 1186 aa19.69■□□□□ 0.74
SDF4-205ENST00000465727 FYNP06241 537 aa19.69■□□□□ 0.74
SDF4-205ENST00000465727 HTR1EP28566 365 aa19.69■□□□□ 0.74
SDF4-205ENST00000465727 HPCAL1P37235 193 aa19.69■□□□□ 0.74
SDF4-205ENST00000465727 LIPEQ05469 1076 aa19.69■□□□□ 0.74
SDF4-205ENST00000465727 ILF2Q12905 390 aaKnown RBP19.69■□□□□ 0.74
SDF4-205ENST00000465727 EPS8Q12929 822 aa19.69■□□□□ 0.74
SDF4-205ENST00000465727 NFYCQ13952 458 aa19.69■□□□□ 0.74
SDF4-205ENST00000465727 ZBTB46Q86UZ6 589 aa19.69■□□□□ 0.74
SDF4-205ENST00000465727 C8orf59Q8N0T1 100 aaPredicted RBP19.69■□□□□ 0.74
SDF4-205ENST00000465727 SPARTQ8N0X7 666 aa19.69■□□□□ 0.74
SDF4-205ENST00000465727 TWIST2Q8WVJ9 160 aa19.69■□□□□ 0.74
SDF4-205ENST00000465727 AURKBQ96GD4 344 aaPredicted RBP19.69■□□□□ 0.74
SDF4-205ENST00000465727 BTN2A3PQ96KV6 586 aa19.69■□□□□ 0.74
SDF4-205ENST00000465727 CXCL16Q9H2A7 254 aa19.69■□□□□ 0.74
SDF4-205ENST00000465727 GLOD4Q9HC38 313 aa19.69■□□□□ 0.74
SDF4-205ENST00000465727 AKIP1Q9NQ31 210 aa19.69■□□□□ 0.74
SDF4-205ENST00000465727 TLR9Q9NR96 1032 aa19.69■□□□□ 0.74
SDF4-205ENST00000465727 SNTG2Q9NY99 539 aa19.69■□□□□ 0.74
SDF4-205ENST00000465727 OAS3Q9Y6K5 1087 aaKnown RBP19.69■□□□□ 0.74
SDF4-205ENST00000465727 PDCD11Q14690 1871 aaKnown RBP19.69■□□□□ 0.74
SDF4-205ENST00000465727 COL1A2P08123 1366 aa19.69■□□□□ 0.74
SDF4-205ENST00000465727 RBM47A0AV96 593 aaKnown RBP19.69■□□□□ 0.74
SDF4-205ENST00000465727 AZIN1O14977 448 aa19.69■□□□□ 0.74
SDF4-205ENST00000465727 TULP3O75386 442 aa19.69■□□□□ 0.74
SDF4-205ENST00000465727 PRSS23O95084 383 aa19.69■□□□□ 0.74
SDF4-205ENST00000465727 KCNH1O95259 989 aa19.69■□□□□ 0.74
SDF4-205ENST00000465727 MT-CYBP00156 380 aaPredicted RBP19.69■□□□□ 0.74
SDF4-205ENST00000465727 THRBP10828 461 aa19.69■□□□□ 0.74
SDF4-205ENST00000465727 NDUFV1P49821 464 aa19.69■□□□□ 0.74
SDF4-205ENST00000465727 SH3BP2P78314 561 aa19.69■□□□□ 0.74
SDF4-205ENST00000465727 DAG1Q14118 895 aa19.69■□□□□ 0.74
SDF4-205ENST00000465727 EML3Q32P44 896 aa19.69■□□□□ 0.74
SDF4-205ENST00000465727 TTC23Q5W5X9 447 aa19.69■□□□□ 0.74
SDF4-205ENST00000465727 KANK2Q63ZY3 851 aa19.69■□□□□ 0.74
SDF4-205ENST00000465727 CRTC3Q6UUV7 619 aa19.69■□□□□ 0.74
SDF4-205ENST00000465727 HFE2Q6ZVN8 426 aa19.69■□□□□ 0.74
SDF4-205ENST00000465727 CHID1Q9BWS9 393 aa19.69■□□□□ 0.74
SDF4-205ENST00000465727 SPATC1LQ9H0A9 340 aa19.69■□□□□ 0.74
SDF4-205ENST00000465727 RMI1Q9H9A7 625 aa19.69■□□□□ 0.74
SDF4-205ENST00000465727 SPATA7Q9P0W8 599 aa19.69■□□□□ 0.74
SDF4-205ENST00000465727 OR12D3Q9UGF7 316 aa19.69■□□□□ 0.74
SDF4-205ENST00000465727 ENPP5Q9UJA9 477 aa19.69■□□□□ 0.74
SDF4-205ENST00000465727 PIP5K1BO14986 540 aa19.68■□□□□ 0.74
SDF4-205ENST00000465727 BCAS1O75363 584 aaPredicted RBP19.68■□□□□ 0.74
SDF4-205ENST00000465727 DEAF1O75398 565 aaPredicted RBP19.68■□□□□ 0.74
SDF4-205ENST00000465727 WISP3O95389 354 aaPredicted RBP19.68■□□□□ 0.74
SDF4-205ENST00000465727 S100A1P23297 94 aa19.68■□□□□ 0.74
SDF4-205ENST00000465727 KCNK10P57789 538 aa19.68■□□□□ 0.74
SDF4-205ENST00000465727 HECTD2Q5U5R9 776 aa19.68■□□□□ 0.74
SDF4-205ENST00000465727 PIK3C3Q8NEB9 887 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms