RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 ZNF106Q9H2Y7 1883 aaKnown RBP16.9■□□□□ 0.3
USP39-211ENST00000465282 CABIN1Q9Y6J0 2220 aa16.89■□□□□ 0.29
USP39-211ENST00000465282 CACNB4O00305 520 aaPredicted RBP16.89■□□□□ 0.29
USP39-211ENST00000465282 PCCBP05166 539 aa16.89■□□□□ 0.29
USP39-211ENST00000465282 LPOP22079 712 aaPredicted RBP16.89■□□□□ 0.29
USP39-211ENST00000465282 ARRB1P49407 418 aaPredicted RBP16.89■□□□□ 0.29
USP39-211ENST00000465282 KIAA1024LP59773 190 aa16.89■□□□□ 0.29
USP39-211ENST00000465282 HENMT1Q5T8I9 393 aaKnown RBP16.89■□□□□ 0.29
USP39-211ENST00000465282 ARMC3Q5W041 872 aa16.89■□□□□ 0.29
USP39-211ENST00000465282 LAYNQ6UX15 382 aa16.89■□□□□ 0.29
USP39-211ENST00000465282 ADAMTSL4Q6UY14 1074 aa16.89■□□□□ 0.29
USP39-211ENST00000465282 PPP1R21Q6ZMI0 780 aa16.89■□□□□ 0.29
USP39-211ENST00000465282 MACC1Q6ZN28 852 aa16.89■□□□□ 0.29
USP39-211ENST00000465282 SPATS2Q86XZ4 545 aaKnown RBP16.89■□□□□ 0.29
USP39-211ENST00000465282 KIAA2013Q8IYS2 634 aa16.89■□□□□ 0.29
USP39-211ENST00000465282 TAB3Q8N5C8 712 aaPredicted RBP16.89■□□□□ 0.29
USP39-211ENST00000465282 MINDY1Q8N5J2 469 aa16.89■□□□□ 0.29
USP39-211ENST00000465282 DNAAF3Q8N9W5 541 aa16.89■□□□□ 0.29
USP39-211ENST00000465282 SPATA4Q8NEY3 305 aa16.89■□□□□ 0.29
USP39-211ENST00000465282 KIF18AQ8NI77 898 aa16.89■□□□□ 0.29
USP39-211ENST00000465282 ELF4Q99607 663 aaPredicted RBP16.89■□□□□ 0.29
USP39-211ENST00000465282 ZSCAN5AQ9BUG6 496 aa16.89■□□□□ 0.29
USP39-211ENST00000465282 GTPBP2Q9BX10 602 aaKnown RBP16.89■□□□□ 0.29
USP39-211ENST00000465282 TEX101Q9BY14 249 aa16.89■□□□□ 0.29
USP39-211ENST00000465282 GAREM1Q9H706 876 aa16.89■□□□□ 0.29
USP39-211ENST00000465282 WDR26Q9H7D7 661 aa16.89■□□□□ 0.29
USP39-211ENST00000465282 CASS4Q9NQ75 786 aa16.89■□□□□ 0.29
USP39-211ENST00000465282 PHPT1Q9NRX4 125 aaPredicted RBP16.89■□□□□ 0.29
USP39-211ENST00000465282 IL17CQ9P0M4 197 aa16.89■□□□□ 0.29
USP39-211ENST00000465282 BPTFQ12830 3046 aa16.88■□□□□ 0.29
USP39-211ENST00000465282 DMXL1Q9Y485 3027 aa16.88■□□□□ 0.29
USP39-211ENST00000465282 A0A0U1RQS6 177 aa16.88■□□□□ 0.29
USP39-211ENST00000465282 CDX4O14627 284 aaPredicted RBP16.88■□□□□ 0.29
USP39-211ENST00000465282 AURKAO14965 403 aa16.88■□□□□ 0.29
USP39-211ENST00000465282 STX7O15400 261 aaKnown RBP16.88■□□□□ 0.29
USP39-211ENST00000465282 URI1O94763 535 aaPredicted RBP16.88■□□□□ 0.29
USP39-211ENST00000465282 GPR1P46091 355 aa16.88■□□□□ 0.29
USP39-211ENST00000465282 DR1Q01658 176 aa16.88■□□□□ 0.29
USP39-211ENST00000465282 PTK6Q13882 451 aa16.88■□□□□ 0.29
USP39-211ENST00000465282 PDE1CQ14123 709 aaPredicted RBP16.88■□□□□ 0.29
USP39-211ENST00000465282 NFATC4Q14934 902 aa16.88■□□□□ 0.29
USP39-211ENST00000465282 TRIP13Q15645 432 aaPredicted RBP16.88■□□□□ 0.29
USP39-211ENST00000465282 WHAMMP3Q1A5X7 153 aa16.88■□□□□ 0.29
USP39-211ENST00000465282 RAET1GQ6H3X3 334 aa16.88■□□□□ 0.29
USP39-211ENST00000465282 PCGF5Q86SE9 256 aa16.88■□□□□ 0.29
USP39-211ENST00000465282 PARGQ86W56 976 aa16.88■□□□□ 0.29
USP39-211ENST00000465282 SLC22A18ASQ8N1D0 253 aa16.88■□□□□ 0.29
USP39-211ENST00000465282 PLA2G15Q8NCC3 412 aa16.88■□□□□ 0.29
USP39-211ENST00000465282 NETO1Q8TDF5 533 aa16.88■□□□□ 0.29
USP39-211ENST00000465282 RIOK2Q9BVS4 552 aaKnown RBP16.88■□□□□ 0.29
USP39-211ENST00000465282 PCDHGB2Q9Y5G2 931 aa16.88■□□□□ 0.29
USP39-211ENST00000465282 CFAP54Q96N23 3096 aa16.88■□□□□ 0.29
USP39-211ENST00000465282 TDRD6O60522 2096 aaKnown RBP16.87■□□□□ 0.29
USP39-211ENST00000465282 A0A1B0GTQ1 180 aa16.87■□□□□ 0.29
USP39-211ENST00000465282 GOLGA8CPA6NN73 597 aa16.87■□□□□ 0.29
USP39-211ENST00000465282 K7ESM1 405 aa16.87■□□□□ 0.29
USP39-211ENST00000465282 TNFRSF10CO14798 259 aa16.87■□□□□ 0.29
USP39-211ENST00000465282 MYCLP1P12525 358 aaPredicted RBP16.87■□□□□ 0.29
USP39-211ENST00000465282 BPIP17213 487 aa16.87■□□□□ 0.29
USP39-211ENST00000465282 HADHAP40939 763 aa16.87■□□□□ 0.29
USP39-211ENST00000465282 PTGIRP43119 386 aa16.87■□□□□ 0.29
USP39-211ENST00000465282 NPY2RP49146 381 aa16.87■□□□□ 0.29
USP39-211ENST00000465282 BLKP51451 505 aa16.87■□□□□ 0.29
USP39-211ENST00000465282 OLIG2Q13516 323 aa16.87■□□□□ 0.29
USP39-211ENST00000465282 FZD2Q14332 565 aa16.87■□□□□ 0.29
USP39-211ENST00000465282 SUZ12Q15022 739 aaKnown RBP16.87■□□□□ 0.29
USP39-211ENST00000465282 STPG1Q5TH74 334 aa16.87■□□□□ 0.29
USP39-211ENST00000465282 RFLNAQ6ZTI6 216 aa16.87■□□□□ 0.29
USP39-211ENST00000465282 NLRP9Q7RTR0 991 aa16.87■□□□□ 0.29
USP39-211ENST00000465282 MAATS1Q7Z4T9 603 aa16.87■□□□□ 0.29
USP39-211ENST00000465282 KLHL7Q8IXQ5 586 aa16.87■□□□□ 0.29
USP39-211ENST00000465282 TRAM1L1Q8N609 369 aa16.87■□□□□ 0.29
USP39-211ENST00000465282 OR52K1Q8NGK4 314 aa16.87■□□□□ 0.29
USP39-211ENST00000465282 BTN2A2Q8WVV5 523 aa16.87■□□□□ 0.29
USP39-211ENST00000465282 ZNF592Q92610 1267 aa16.87■□□□□ 0.29
USP39-211ENST00000465282 SCAMP4Q969E2 229 aa16.87■□□□□ 0.29
USP39-211ENST00000465282 FUBP1Q96AE4 644 aaKnown RBP16.87■□□□□ 0.29
USP39-211ENST00000465282 RANBP9Q96S59 729 aa16.87■□□□□ 0.29
USP39-211ENST00000465282 FSCN3Q9NQT6 498 aa16.87■□□□□ 0.29
USP39-211ENST00000465282 RXFP3Q9NSD7 469 aa16.87■□□□□ 0.29
USP39-211ENST00000465282 CD84Q9UIB8 345 aa16.87■□□□□ 0.29
USP39-211ENST00000465282 APPL1Q9UKG1 709 aa16.87■□□□□ 0.29
USP39-211ENST00000465282 OR1A2Q9Y585 309 aa16.87■□□□□ 0.29
USP39-211ENST00000465282 MYLKQ15746 1914 aa16.87■□□□□ 0.29
USP39-211ENST00000465282 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.86■□□□□ 0.29
USP39-211ENST00000465282 HEATR9A2RTY3 570 aa16.86■□□□□ 0.29
USP39-211ENST00000465282 NDC80O14777 642 aa16.86■□□□□ 0.29
USP39-211ENST00000465282 LDB2O43679 373 aa16.86■□□□□ 0.29
USP39-211ENST00000465282 PCDHGA12O60330 932 aa16.86■□□□□ 0.29
USP39-211ENST00000465282 SOD1P00441 154 aa16.86■□□□□ 0.29
USP39-211ENST00000465282 MLNP12872 115 aa16.86■□□□□ 0.29
USP39-211ENST00000465282 SPAM1P38567 509 aa16.86■□□□□ 0.29
USP39-211ENST00000465282 ADCY8P40145 1251 aa16.86■□□□□ 0.29
USP39-211ENST00000465282 VPS41P49754 854 aa16.86■□□□□ 0.29
USP39-211ENST00000465282 CCT8P50990 548 aa16.86■□□□□ 0.29
USP39-211ENST00000465282 HNRNPKP61978 463 aaKnown RBP eCLIP16.86■□□□□ 0.29
USP39-211ENST00000465282 CDK3Q00526 305 aa16.86■□□□□ 0.29
USP39-211ENST00000465282 KCNJ11Q14654 390 aa16.86■□□□□ 0.29
USP39-211ENST00000465282 LRRC8BQ6P9F7 803 aa16.86■□□□□ 0.29
USP39-211ENST00000465282 HEATR4Q86WZ0 1026 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms