RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 TOP3BO95985 862 aaKnown RBP16.99■□□□□ 0.31
VPS52-215ENST00000464425 SLC4A1P02730 911 aa16.99■□□□□ 0.31
VPS52-215ENST00000464425 PAFAH1B1P43034 410 aa16.99■□□□□ 0.31
VPS52-215ENST00000464425 GPR1P46091 355 aa16.99■□□□□ 0.31
VPS52-215ENST00000464425 SRP54P61011 504 aaKnown RBP16.99■□□□□ 0.31
VPS52-215ENST00000464425 DNAJC3Q13217 504 aa16.99■□□□□ 0.31
VPS52-215ENST00000464425 PRRT3Q5FWE3 981 aa16.99■□□□□ 0.31
VPS52-215ENST00000464425 KCTD16Q68DU8 428 aa16.99■□□□□ 0.31
VPS52-215ENST00000464425 ITPRIPL1Q6GPH6 555 aa16.99■□□□□ 0.31
VPS52-215ENST00000464425 LYSMD3Q7Z3D4 306 aa16.99■□□□□ 0.31
VPS52-215ENST00000464425 HEATR4Q86WZ0 1026 aa16.99■□□□□ 0.31
VPS52-215ENST00000464425 FAM71DQ8N9W8 422 aa16.99■□□□□ 0.31
VPS52-215ENST00000464425 CCHCR1Q8TD31 782 aa16.99■□□□□ 0.31
VPS52-215ENST00000464425 BTN2A2Q8WVV5 523 aa16.99■□□□□ 0.31
VPS52-215ENST00000464425 RTP4Q96DX8 246 aa16.99■□□□□ 0.31
VPS52-215ENST00000464425 MRGPRX2Q96LB1 330 aa16.99■□□□□ 0.31
VPS52-215ENST00000464425 TMEM121Q9BTD3 319 aa16.99■□□□□ 0.31
VPS52-215ENST00000464425 GBA3Q9H227 469 aa16.99■□□□□ 0.31
VPS52-215ENST00000464425 KLQ9UEF7 1012 aa16.99■□□□□ 0.31
VPS52-215ENST00000464425 APOBEC3BQ9UH17 382 aaKnown RBP16.99■□□□□ 0.31
VPS52-215ENST00000464425 MOSPD1Q9UJG1 213 aa16.99■□□□□ 0.31
VPS52-215ENST00000464425 ZNF148Q9UQR1 794 aa16.99■□□□□ 0.31
VPS52-215ENST00000464425 SPEGQ15772 3267 aa16.98■□□□□ 0.31
VPS52-215ENST00000464425 GOLGA6L10A0A0M3HER8 536 aa16.98■□□□□ 0.31
VPS52-215ENST00000464425 LOC285095A0A1B0GVY8 99 aa16.98■□□□□ 0.31
VPS52-215ENST00000464425 NEMP2A6NFY4 417 aa16.98■□□□□ 0.31
VPS52-215ENST00000464425 AQP9O43315 295 aa16.98■□□□□ 0.31
VPS52-215ENST00000464425 GCATO75600 419 aa16.98■□□□□ 0.31
VPS52-215ENST00000464425 HOXC4P09017 264 aaPredicted RBP16.98■□□□□ 0.31
VPS52-215ENST00000464425 GIMD1P0DJR0 217 aa16.98■□□□□ 0.31
VPS52-215ENST00000464425 TSHRP16473 764 aa16.98■□□□□ 0.31
VPS52-215ENST00000464425 PSMB4P28070 264 aa16.98■□□□□ 0.31
VPS52-215ENST00000464425 PMLP29590 882 aa16.98■□□□□ 0.31
VPS52-215ENST00000464425 CHRNA4P43681 627 aa16.98■□□□□ 0.31
VPS52-215ENST00000464425 TNNT3P45378 269 aaPredicted RBP16.98■□□□□ 0.31
VPS52-215ENST00000464425 HK3P52790 923 aa16.98■□□□□ 0.31
VPS52-215ENST00000464425 KIAA1024LP59773 190 aa16.98■□□□□ 0.31
VPS52-215ENST00000464425 DPTQ07507 201 aa16.98■□□□□ 0.31
VPS52-215ENST00000464425 MPP3Q13368 585 aa16.98■□□□□ 0.31
VPS52-215ENST00000464425 SIRPB2Q5JXA9 342 aa16.98■□□□□ 0.31
VPS52-215ENST00000464425 NRSN1Q8IZ57 195 aa16.98■□□□□ 0.31
VPS52-215ENST00000464425 ATL2Q8NHH9 583 aa16.98■□□□□ 0.31
VPS52-215ENST00000464425 OR1E3Q8WZA6 343 aa16.98■□□□□ 0.31
VPS52-215ENST00000464425 EID2BQ96D98 161 aa16.98■□□□□ 0.31
VPS52-215ENST00000464425 SPATA13Q96N96 652 aa16.98■□□□□ 0.31
VPS52-215ENST00000464425 AGAP2Q99490 1192 aa16.98■□□□□ 0.31
VPS52-215ENST00000464425 LRRC61Q9BV99 259 aa16.98■□□□□ 0.31
VPS52-215ENST00000464425 RIOK2Q9BVS4 552 aaKnown RBP16.98■□□□□ 0.31
VPS52-215ENST00000464425 AP1M1Q9BXS5 423 aa16.98■□□□□ 0.31
VPS52-215ENST00000464425 ZFYVE1Q9HBF4 777 aa16.98■□□□□ 0.31
VPS52-215ENST00000464425 MAGEE1Q9HCI5 957 aa16.98■□□□□ 0.31
VPS52-215ENST00000464425 MRPL40Q9NQ50 206 aaKnown RBP16.98■□□□□ 0.31
VPS52-215ENST00000464425 PHPT1Q9NRX4 125 aaPredicted RBP16.98■□□□□ 0.31
VPS52-215ENST00000464425 TOR4AQ9NXH8 423 aa16.98■□□□□ 0.31
VPS52-215ENST00000464425 SPASTQ9UBP0 616 aa16.98■□□□□ 0.31
VPS52-215ENST00000464425 APOBEC2Q9Y235 224 aaKnown RBP16.98■□□□□ 0.31
VPS52-215ENST00000464425 ZNF711Q9Y462 761 aa16.98■□□□□ 0.31
VPS52-215ENST00000464425 SPO11Q9Y5K1 396 aa16.98■□□□□ 0.31
VPS52-215ENST00000464425 RASGRP1O95267 797 aa16.97■□□□□ 0.31
VPS52-215ENST00000464425 CELA2BP08218 269 aaPredicted RBP16.97■□□□□ 0.31
VPS52-215ENST00000464425 MYF5P13349 255 aa16.97■□□□□ 0.31
VPS52-215ENST00000464425 CTSEP14091 401 aa16.97■□□□□ 0.31
VPS52-215ENST00000464425 SPINK2P20155 84 aa16.97■□□□□ 0.31
VPS52-215ENST00000464425 SPINT3P49223 89 aa16.97■□□□□ 0.31
VPS52-215ENST00000464425 BLKP51451 505 aa16.97■□□□□ 0.31
VPS52-215ENST00000464425 CDK3Q00526 305 aa16.97■□□□□ 0.31
VPS52-215ENST00000464425 SNX1Q13596 522 aa16.97■□□□□ 0.31
VPS52-215ENST00000464425 TUBB2AQ13885 445 aa16.97■□□□□ 0.31
VPS52-215ENST00000464425 PRPSAP1Q14558 356 aa16.97■□□□□ 0.31
VPS52-215ENST00000464425 DEFB133Q30KQ1 61 aa16.97■□□□□ 0.31
VPS52-215ENST00000464425 CHCHD4Q8N4Q1 142 aa16.97■□□□□ 0.31
VPS52-215ENST00000464425 OR56A4Q8NGH8 313 aa16.97■□□□□ 0.31
VPS52-215ENST00000464425 OR4C6Q8NH72 309 aa16.97■□□□□ 0.31
VPS52-215ENST00000464425 KIF18AQ8NI77 898 aa16.97■□□□□ 0.31
VPS52-215ENST00000464425 PDXPQ96GD0 296 aa16.97■□□□□ 0.31
VPS52-215ENST00000464425 CAPZA3Q96KX2 299 aa16.97■□□□□ 0.31
VPS52-215ENST00000464425 GORASP1Q9BQQ3 440 aa16.97■□□□□ 0.31
VPS52-215ENST00000464425 TUBB2BQ9BVA1 445 aa16.97■□□□□ 0.31
VPS52-215ENST00000464425 TEX101Q9BY14 249 aa16.97■□□□□ 0.31
VPS52-215ENST00000464425 GPR63Q9BZJ6 419 aa16.97■□□□□ 0.31
VPS52-215ENST00000464425 CLPBQ9H078 707 aa16.97■□□□□ 0.31
VPS52-215ENST00000464425 SUDS3Q9H7L9 328 aaPredicted RBP16.97■□□□□ 0.31
VPS52-215ENST00000464425 FGF22Q9HCT0 170 aa16.97■□□□□ 0.31
VPS52-215ENST00000464425 NLGN3Q9NZ94 848 aa16.97■□□□□ 0.31
VPS52-215ENST00000464425 SMARCAL1Q9NZC9 954 aa16.97■□□□□ 0.31
VPS52-215ENST00000464425 PKD2L2Q9NZM6 624 aa16.97■□□□□ 0.31
VPS52-215ENST00000464425 FEZ2Q9UHY8 353 aaPredicted RBP16.97■□□□□ 0.31
VPS52-215ENST00000464425 PDE2AO00408 941 aaPredicted RBP16.96■□□□□ 0.31
VPS52-215ENST00000464425 AURKAO14965 403 aa16.96■□□□□ 0.31
VPS52-215ENST00000464425 HYAL3O43820 417 aaPredicted RBP16.96■□□□□ 0.31
VPS52-215ENST00000464425 ANXA9O76027 345 aa16.96■□□□□ 0.31
VPS52-215ENST00000464425 SOD1P00441 154 aa16.96■□□□□ 0.31
VPS52-215ENST00000464425 AGTP01019 485 aa16.96■□□□□ 0.31
VPS52-215ENST00000464425 TNFP01375 233 aa16.96■□□□□ 0.31
VPS52-215ENST00000464425 EPOP01588 193 aa16.96■□□□□ 0.31
VPS52-215ENST00000464425 ALPPL2P10696 532 aa16.96■□□□□ 0.31
VPS52-215ENST00000464425 MYCLP1P12525 358 aaPredicted RBP16.96■□□□□ 0.31
VPS52-215ENST00000464425 KELP23276 732 aa16.96■□□□□ 0.31
VPS52-215ENST00000464425 GEMP55040 296 aa16.96■□□□□ 0.31
VPS52-215ENST00000464425 GDF10P55107 478 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms