RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-210	ENST00000464313	AMZ1	Q400G9	498 aa		4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313	PPP6R3	Q5H9R7	873 aa	Predicted RBP	4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313	EFHC1	Q5JVL4	640 aa		4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313	GGNBP1	Q5YKI7	109 aa		4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313	ZNF280D	Q6N043	979 aa		4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313	METTL2B	Q6P1Q9	378 aa	Known RBP	4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313	GLDN	Q6ZMI3	551 aa	Predicted RBP	4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313	RBMXL3	Q8N7X1	1067 aa	Known RBP	4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313	HMGCLL1	Q8TB92	370 aa		4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313	ELP5	Q8TE02	316 aa		4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313	FAM216A	Q8WUB2	273 aa		4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313	PHF21B	Q96EK2	531 aa		4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313	GRAMD2B	Q96HH9	432 aa		4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313	METTL2A	Q96IZ6	378 aa	Known RBP	4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313	SRSF8	Q9BRL6	282 aa	Known RBP	4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313	ZPBP	Q9BS86	351 aa		4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313	SEZ6L	Q9BYH1	1024 aa		4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313	C17orf75	Q9HAS0	396 aa		4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313	ACSS1	Q9NUB1	689 aa	Predicted RBP	4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313	SETD4	Q9NVD3	440 aa		4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313	ADD3	Q9UEY8	706 aa	Known RBP	4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313	TTC7A	Q9ULT0	858 aa	Predicted RBP	4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313	SNX9	Q9Y5X1	595 aa		4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313	CLIC4	Q9Y696	253 aa		4.09	□□□□□ -1.75
PTPN12-210	ENST00000464313		A6NCN8	305 aa		4.08	□□□□□ -1.76
PTPN12-210	ENST00000464313	SRRM3	A6NNA2	597 aa	Predicted RBP	4.08	□□□□□ -1.76
PTPN12-210	ENST00000464313	LACTBL1	A8MY62	500 aa		4.08	□□□□□ -1.76
PTPN12-210	ENST00000464313	ATP2A1	O14983	1001 aa		4.08	□□□□□ -1.76
PTPN12-210	ENST00000464313	VILL	O15195	856 aa		4.08	□□□□□ -1.76
PTPN12-210	ENST00000464313	HCRTR2	O43614	444 aa		4.08	□□□□□ -1.76
PTPN12-210	ENST00000464313	KCNK5	O95279	499 aa		4.08	□□□□□ -1.76
PTPN12-210	ENST00000464313	GABRB1	P18505	474 aa		4.08	□□□□□ -1.76
PTPN12-210	ENST00000464313	HOXD13	P35453	343 aa		4.08	□□□□□ -1.76
PTPN12-210	ENST00000464313	KCNJ4	P48050	445 aa		4.08	□□□□□ -1.76
PTPN12-210	ENST00000464313	CDH8	P55286	799 aa		4.08	□□□□□ -1.76
PTPN12-210	ENST00000464313	NLRP5	P59047	1200 aa		4.08	□□□□□ -1.76
PTPN12-210	ENST00000464313	BRWD1-AS2	P59051	145 aa		4.08	□□□□□ -1.76
PTPN12-210	ENST00000464313	MC1R	Q01726	317 aa		4.08	□□□□□ -1.76
PTPN12-210	ENST00000464313	GRSF1	Q12849	480 aa	Known RBP eCLIP	4.08	□□□□□ -1.76
PTPN12-210	ENST00000464313	MYBPH	Q13203	477 aa		4.08	□□□□□ -1.76
PTPN12-210	ENST00000464313	IRF3	Q14653	427 aa		4.08	□□□□□ -1.76
PTPN12-210	ENST00000464313	NFATC4	Q14934	902 aa		4.08	□□□□□ -1.76
PTPN12-210	ENST00000464313	HLF	Q16534	295 aa		4.08	□□□□□ -1.76
PTPN12-210	ENST00000464313	CTF1	Q16619	201 aa		4.08	□□□□□ -1.76
PTPN12-210	ENST00000464313	KRT24	Q2M2I5	525 aa		4.08	□□□□□ -1.76
PTPN12-210	ENST00000464313	DUS1L	Q6P1R4	473 aa	Known RBP	4.08	□□□□□ -1.76
PTPN12-210	ENST00000464313	TMEM154	Q6P9G4	183 aa		4.08	□□□□□ -1.76
PTPN12-210	ENST00000464313	RHBDF2	Q6PJF5	856 aa		4.08	□□□□□ -1.76
PTPN12-210	ENST00000464313	CHST9	Q7L1S5	443 aa		4.08	□□□□□ -1.76
PTPN12-210	ENST00000464313	FASTKD5	Q7L8L6	764 aa	Known RBP	4.08	□□□□□ -1.76
PTPN12-210	ENST00000464313	SZRD1	Q7Z422	152 aa		4.08	□□□□□ -1.76
PTPN12-210	ENST00000464313	IQCF1	Q8N6M8	205 aa		4.08	□□□□□ -1.76
PTPN12-210	ENST00000464313	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	4.08	□□□□□ -1.76
PTPN12-210	ENST00000464313	HJURP	Q8NCD3	748 aa	Predicted RBP	4.08	□□□□□ -1.76
PTPN12-210	ENST00000464313	POMGNT1	Q8WZA1	660 aa		4.08	□□□□□ -1.76
PTPN12-210	ENST00000464313	RHBDF1	Q96CC6	855 aa		4.08	□□□□□ -1.76
PTPN12-210	ENST00000464313	SCMH1	Q96GD3	660 aa		4.08	□□□□□ -1.76
PTPN12-210	ENST00000464313	FIZ1	Q96SL8	496 aa		4.08	□□□□□ -1.76
PTPN12-210	ENST00000464313	TMEM204	Q9BSN7	226 aa		4.08	□□□□□ -1.76
PTPN12-210	ENST00000464313	PIGM	Q9H3S5	423 aa		4.08	□□□□□ -1.76
PTPN12-210	ENST00000464313	COPG2	Q9UBF2	871 aa		4.08	□□□□□ -1.76
PTPN12-210	ENST00000464313	ZNF215	Q9UL58	517 aa	Predicted RBP	4.08	□□□□□ -1.76
PTPN12-210	ENST00000464313	GPR34	Q9UPC5	381 aa		4.08	□□□□□ -1.76
PTPN12-210	ENST00000464313	TCF20	Q9UGU0	1960 aa	Known RBP	4.07	□□□□□ -1.76
PTPN12-210	ENST00000464313	AGAP14	A8MT82	685 aa		4.07	□□□□□ -1.76
PTPN12-210	ENST00000464313	KDM4B	O94953	1096 aa		4.07	□□□□□ -1.76
PTPN12-210	ENST00000464313	IGHV4-30-4	P0DP06	118 aa		4.07	□□□□□ -1.76
PTPN12-210	ENST00000464313	TNFRSF8	P28908	595 aa		4.07	□□□□□ -1.76
PTPN12-210	ENST00000464313	BDKRB2	P30411	391 aa		4.07	□□□□□ -1.76
PTPN12-210	ENST00000464313	NAP1L1	P55209	391 aa	Known RBP	4.07	□□□□□ -1.76
PTPN12-210	ENST00000464313	CREB5	Q02930	508 aa		4.07	□□□□□ -1.76
PTPN12-210	ENST00000464313	EGR4	Q05215	589 aa		4.07	□□□□□ -1.76
PTPN12-210	ENST00000464313	LTB	Q06643	244 aa		4.07	□□□□□ -1.76
PTPN12-210	ENST00000464313	CRYM	Q14894	314 aa		4.07	□□□□□ -1.76
PTPN12-210	ENST00000464313	NAB2	Q15742	525 aa		4.07	□□□□□ -1.76
PTPN12-210	ENST00000464313	ZSCAN23	Q3MJ62	389 aa		4.07	□□□□□ -1.76
PTPN12-210	ENST00000464313	ATP13A5	Q4VNC0	1218 aa		4.07	□□□□□ -1.76
PTPN12-210	ENST00000464313	TMEM198	Q66K66	360 aa		4.07	□□□□□ -1.76
PTPN12-210	ENST00000464313	SIGIRR	Q6IA17	410 aa		4.07	□□□□□ -1.76
PTPN12-210	ENST00000464313	KCTD18	Q6PI47	426 aa	Predicted RBP	4.07	□□□□□ -1.76
PTPN12-210	ENST00000464313	SARM1	Q6SZW1	724 aa		4.07	□□□□□ -1.76
PTPN12-210	ENST00000464313	SPATA2L	Q8IUW3	424 aa	Predicted RBP	4.07	□□□□□ -1.76
PTPN12-210	ENST00000464313	BEST3	Q8N1M1	668 aa		4.07	□□□□□ -1.76
PTPN12-210	ENST00000464313	SRBD1	Q8N5C6	995 aa	Known RBP	4.07	□□□□□ -1.76
PTPN12-210	ENST00000464313	ZNF114	Q8NC26	417 aa		4.07	□□□□□ -1.76
PTPN12-210	ENST00000464313	ORAI1	Q96D31	301 aa		4.07	□□□□□ -1.76
PTPN12-210	ENST00000464313	FAM120B	Q96EK7	910 aa	Known RBP	4.07	□□□□□ -1.76
PTPN12-210	ENST00000464313	C3orf30	Q96M34	536 aa		4.07	□□□□□ -1.76
PTPN12-210	ENST00000464313	HARBI1	Q96MB7	349 aa		4.07	□□□□□ -1.76
PTPN12-210	ENST00000464313	GAD1	Q99259	594 aa		4.07	□□□□□ -1.76
PTPN12-210	ENST00000464313	PCYT2	Q99447	389 aa		4.07	□□□□□ -1.76
PTPN12-210	ENST00000464313	CMKLR1	Q99788	373 aa		4.07	□□□□□ -1.76
PTPN12-210	ENST00000464313	MMTAG2	Q9BU76	263 aa	Known RBP	4.07	□□□□□ -1.76
PTPN12-210	ENST00000464313	IL25	Q9H293	177 aa		4.07	□□□□□ -1.76
PTPN12-210	ENST00000464313	HIPK2	Q9H2X6	1198 aa		4.07	□□□□□ -1.76
PTPN12-210	ENST00000464313	PLK3	Q9H4B4	646 aa		4.07	□□□□□ -1.76
PTPN12-210	ENST00000464313	SYNC	Q9H7C4	482 aa		4.07	□□□□□ -1.76
PTPN12-210	ENST00000464313	C1RL	Q9NZP8	487 aa		4.07	□□□□□ -1.76
PTPN12-210	ENST00000464313	VPS28	Q9UK41	221 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms