RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 PILRAQ9UKJ1 303 aa17.23■□□□□ 0.35
HMGN1-210ENST00000464078 PHTF1Q9UMS5 762 aa17.23■□□□□ 0.35
HMGN1-210ENST00000464078 PCDHGC4Q9Y5F7 938 aa17.23■□□□□ 0.35
HMGN1-210ENST00000464078 NOTCH2Q04721 2471 aa17.22■□□□□ 0.35
HMGN1-210ENST00000464078 NPIPB15A6NHN6 443 aaPredicted RBP17.22■□□□□ 0.35
HMGN1-210ENST00000464078 SOD1P00441 154 aa17.22■□□□□ 0.35
HMGN1-210ENST00000464078 NTRK1P04629 796 aa17.22■□□□□ 0.35
HMGN1-210ENST00000464078 ACTR1BP42025 376 aa17.22■□□□□ 0.35
HMGN1-210ENST00000464078 POLD2P49005 469 aa17.22■□□□□ 0.35
HMGN1-210ENST00000464078 COPB1P53618 953 aaKnown RBP17.22■□□□□ 0.35
HMGN1-210ENST00000464078 ACTR1AP61163 376 aa17.22■□□□□ 0.35
HMGN1-210ENST00000464078 TRAF2Q12933 501 aa17.22■□□□□ 0.35
HMGN1-210ENST00000464078 LRP8Q14114 963 aa17.22■□□□□ 0.35
HMGN1-210ENST00000464078 PPP6R3Q5H9R7 873 aaPredicted RBP17.22■□□□□ 0.35
HMGN1-210ENST00000464078 RAET1GQ6H3X3 334 aa17.22■□□□□ 0.35
HMGN1-210ENST00000464078 ADAMTSL4Q6UY14 1074 aa17.22■□□□□ 0.35
HMGN1-210ENST00000464078 Q6ZVL8 140 aa17.22■□□□□ 0.35
HMGN1-210ENST00000464078 SCRN2Q96FV2 425 aa17.22■□□□□ 0.35
HMGN1-210ENST00000464078 TMEM9Q9P0T7 183 aa17.22■□□□□ 0.35
HMGN1-210ENST00000464078 PPIL1Q9Y3C6 166 aa17.22■□□□□ 0.35
HMGN1-210ENST00000464078 TMEM191CA6NGB0 347 aa17.21■□□□□ 0.35
HMGN1-210ENST00000464078 DUX1O43812 170 aa17.21■□□□□ 0.35
HMGN1-210ENST00000464078 PRPSAP2O60256 369 aa17.21■□□□□ 0.35
HMGN1-210ENST00000464078 CCDC172P0C7W6 258 aa17.21■□□□□ 0.35
HMGN1-210ENST00000464078 ATP1A3P13637 1013 aa17.21■□□□□ 0.35
HMGN1-210ENST00000464078 FERP16591 822 aa17.21■□□□□ 0.35
HMGN1-210ENST00000464078 UBAP2LQ14157 1087 aaKnown RBP17.21■□□□□ 0.35
HMGN1-210ENST00000464078 SKIDA1Q1XH10 827 aa17.21■□□□□ 0.35
HMGN1-210ENST00000464078 ANKS6Q68DC2 871 aa17.21■□□□□ 0.35
HMGN1-210ENST00000464078 WDR74Q6RFH5 385 aaPredicted RBP17.21■□□□□ 0.35
HMGN1-210ENST00000464078 USP45Q70EL2 814 aa17.21■□□□□ 0.35
HMGN1-210ENST00000464078 ZNF765Q7L2R6 523 aa17.21■□□□□ 0.35
HMGN1-210ENST00000464078 TECPR1Q7Z6L1 1165 aa17.21■□□□□ 0.35
HMGN1-210ENST00000464078 FAM129CQ86XR2 697 aa17.21■□□□□ 0.35
HMGN1-210ENST00000464078 PTRH1Q86Y79 214 aaKnown RBP17.21■□□□□ 0.35
HMGN1-210ENST00000464078 TP53INP2Q8IXH6 220 aa17.21■□□□□ 0.35
HMGN1-210ENST00000464078 PGBD5Q8N414 524 aa17.21■□□□□ 0.35
HMGN1-210ENST00000464078 SFRP1Q8N474 314 aa17.21■□□□□ 0.35
HMGN1-210ENST00000464078 PDCD6IPQ8WUM4 868 aaKnown RBP17.21■□□□□ 0.35
HMGN1-210ENST00000464078 PCMTD1Q96MG8 357 aaPredicted RBP17.21■□□□□ 0.35
HMGN1-210ENST00000464078 NOD2Q9HC29 1040 aa17.21■□□□□ 0.35
HMGN1-210ENST00000464078 FANCLQ9NW38 375 aa17.21■□□□□ 0.35
HMGN1-210ENST00000464078 OCIAD1Q9NX40 245 aa17.21■□□□□ 0.35
HMGN1-210ENST00000464078 CWC15Q9P013 229 aaKnown RBP17.21■□□□□ 0.35
HMGN1-210ENST00000464078 LIMA1Q9UHB6 759 aaKnown RBP17.21■□□□□ 0.35
HMGN1-210ENST00000464078 PCSK1NQ9UHG2 260 aa17.21■□□□□ 0.35
HMGN1-210ENST00000464078 RP1L1Q8IWN7 2480 aaPredicted RBP17.2■□□□□ 0.34
HMGN1-210ENST00000464078 TTC24A2A3L6 582 aaPredicted RBP17.2■□□□□ 0.34
HMGN1-210ENST00000464078 EFCAB7A8K855 629 aa17.2■□□□□ 0.34
HMGN1-210ENST00000464078 RNF8O76064 485 aa17.2■□□□□ 0.34
HMGN1-210ENST00000464078 PGLSO95336 258 aa17.2■□□□□ 0.34
HMGN1-210ENST00000464078 MIPP30301 263 aa17.2■□□□□ 0.34
HMGN1-210ENST00000464078 CRTC2Q53ET0 693 aaPredicted RBP17.2■□□□□ 0.34
HMGN1-210ENST00000464078 PYCR3Q53H96 274 aa17.2■□□□□ 0.34
HMGN1-210ENST00000464078 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.2■□□□□ 0.34
HMGN1-210ENST00000464078 DENND2CQ68D51 928 aa17.2■□□□□ 0.34
HMGN1-210ENST00000464078 ARHGAP22Q7Z5H3 698 aa17.2■□□□□ 0.34
HMGN1-210ENST00000464078 TSPAN33Q86UF1 283 aa17.2■□□□□ 0.34
HMGN1-210ENST00000464078 NLRP8Q86W28 1048 aa17.2■□□□□ 0.34
HMGN1-210ENST00000464078 NLGN4XQ8N0W4 816 aa17.2■□□□□ 0.34
HMGN1-210ENST00000464078 NLGN4YQ8NFZ3 816 aaPredicted RBP17.2■□□□□ 0.34
HMGN1-210ENST00000464078 OR10G6Q8NH81 332 aa17.2■□□□□ 0.34
HMGN1-210ENST00000464078 C9orf43Q8TAL5 461 aaPredicted RBP17.2■□□□□ 0.34
HMGN1-210ENST00000464078 SLC37A2Q8TED4 501 aa17.2■□□□□ 0.34
HMGN1-210ENST00000464078 KIAA1143Q96AT1 154 aaPredicted RBP17.2■□□□□ 0.34
HMGN1-210ENST00000464078 RTP4Q96DX8 246 aa17.2■□□□□ 0.34
HMGN1-210ENST00000464078 ZPBPQ9BS86 351 aa17.2■□□□□ 0.34
HMGN1-210ENST00000464078 EFHD1Q9BUP0 239 aa17.2■□□□□ 0.34
HMGN1-210ENST00000464078 ZWILCHQ9H900 591 aa17.2■□□□□ 0.34
HMGN1-210ENST00000464078 GPN2Q9H9Y4 310 aaPredicted RBP17.2■□□□□ 0.34
HMGN1-210ENST00000464078 TAS2R14Q9NYV8 317 aa17.2■□□□□ 0.34
HMGN1-210ENST00000464078 MYO9AB2RTY4 2548 aa17.19■□□□□ 0.34
HMGN1-210ENST00000464078 GOLGA6CA6NDK9 693 aa17.19■□□□□ 0.34
HMGN1-210ENST00000464078 GOLGA6BA6NDN3 693 aa17.19■□□□□ 0.34
HMGN1-210ENST00000464078 ATMINO43313 823 aaPredicted RBP17.19■□□□□ 0.34
HMGN1-210ENST00000464078 MAFKO60675 156 aa17.19■□□□□ 0.34
HMGN1-210ENST00000464078 LRCH4O75427 683 aa17.19■□□□□ 0.34
HMGN1-210ENST00000464078 PYGLP06737 847 aa17.19■□□□□ 0.34
HMGN1-210ENST00000464078 GOLGA6DP0CG33 693 aa17.19■□□□□ 0.34
HMGN1-210ENST00000464078 MPSTP25325 297 aa17.19■□□□□ 0.34
HMGN1-210ENST00000464078 MAP4P27816 1152 aaKnown RBP17.19■□□□□ 0.34
HMGN1-210ENST00000464078 MAN1A1P33908 653 aa17.19■□□□□ 0.34
HMGN1-210ENST00000464078 GPR1P46091 355 aa17.19■□□□□ 0.34
HMGN1-210ENST00000464078 MC2RQ01718 297 aa17.19■□□□□ 0.34
HMGN1-210ENST00000464078 CDC20Q12834 499 aa17.19■□□□□ 0.34
HMGN1-210ENST00000464078 DPYSL2Q16555 572 aa17.19■□□□□ 0.34
HMGN1-210ENST00000464078 DOK6Q6PKX4 331 aa17.19■□□□□ 0.34
HMGN1-210ENST00000464078 IRF2BP2Q7Z5L9 587 aa17.19■□□□□ 0.34
HMGN1-210ENST00000464078 BBS5Q8N3I7 341 aa17.19■□□□□ 0.34
HMGN1-210ENST00000464078 ANKRD20A12PQ8NF67 263 aa17.19■□□□□ 0.34
HMGN1-210ENST00000464078 FBXO8Q9NRD0 319 aa17.19■□□□□ 0.34
HMGN1-210ENST00000464078 GOLGA6AQ9NYA3 693 aa17.19■□□□□ 0.34
HMGN1-210ENST00000464078 MYO6Q9UM54 1294 aa17.19■□□□□ 0.34
HMGN1-210ENST00000464078 PLEKHM1Q9Y4G2 1056 aa17.19■□□□□ 0.34
HMGN1-210ENST00000464078 TMEM184BQ9Y519 407 aaPredicted RBP17.19■□□□□ 0.34
HMGN1-210ENST00000464078 LRRC10BA6NIK2 292 aa17.18■□□□□ 0.34
HMGN1-210ENST00000464078 H3BRJ5 948 aa17.18■□□□□ 0.34
HMGN1-210ENST00000464078 ZNF30P17039 623 aa17.18■□□□□ 0.34
HMGN1-210ENST00000464078 CDH6P55285 790 aa17.18■□□□□ 0.34
HMGN1-210ENST00000464078 UBXN1Q04323 297 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms