RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 SCARF2Q96GP6 870 aaPredicted RBP7.7□□□□□ -1.18
SMC3-202ENST00000462899 EXOC2Q96KP1 924 aa7.7□□□□□ -1.18
SMC3-202ENST00000462899 NSMCE3Q96MG7 304 aa7.7□□□□□ -1.18
SMC3-202ENST00000462899 CFAP57Q96MR6 1250 aa7.7□□□□□ -1.18
SMC3-202ENST00000462899 INSM2Q96T92 566 aaPredicted RBP7.7□□□□□ -1.18
SMC3-202ENST00000462899 CTRCQ99895 268 aa7.7□□□□□ -1.18
SMC3-202ENST00000462899 TEX101Q9BY14 249 aa7.7□□□□□ -1.18
SMC3-202ENST00000462899 GSDMCQ9BYG8 508 aa7.7□□□□□ -1.18
SMC3-202ENST00000462899 SUV39H2Q9H5I1 410 aa7.7□□□□□ -1.18
SMC3-202ENST00000462899 WDR26Q9H7D7 661 aa7.7□□□□□ -1.18
SMC3-202ENST00000462899 CARS2Q9HA77 564 aaKnown RBP7.7□□□□□ -1.18
SMC3-202ENST00000462899 PDFQ9HBH1 243 aa7.7□□□□□ -1.18
SMC3-202ENST00000462899 PLCB1Q9NQ66 1216 aa7.7□□□□□ -1.18
SMC3-202ENST00000462899 RMND1Q9NWS8 449 aa7.7□□□□□ -1.18
SMC3-202ENST00000462899 OR12D3Q9UGF7 316 aa7.7□□□□□ -1.18
SMC3-202ENST00000462899 ERRFI1Q9UJM3 462 aaPredicted RBP7.7□□□□□ -1.18
SMC3-202ENST00000462899 SLC17A4Q9Y2C5 497 aa7.7□□□□□ -1.18
SMC3-202ENST00000462899 PCDHGA6Q9Y5G7 932 aa7.7□□□□□ -1.18
SMC3-202ENST00000462899 RPS6KL1Q9Y6S9 549 aa7.7□□□□□ -1.18
SMC3-202ENST00000462899 PCM1Q15154 2024 aa7.69□□□□□ -1.18
SMC3-202ENST00000462899 TCP11X1B4DZS4 312 aa7.69□□□□□ -1.18
SMC3-202ENST00000462899 TRAFD1O14545 582 aaPredicted RBP7.69□□□□□ -1.18
SMC3-202ENST00000462899 ZW10O43264 779 aa7.69□□□□□ -1.18
SMC3-202ENST00000462899 DNAJB5O75953 348 aa7.69□□□□□ -1.18
SMC3-202ENST00000462899 RECKO95980 971 aa7.69□□□□□ -1.18
SMC3-202ENST00000462899 ZNF28P17035 718 aa7.69□□□□□ -1.18
SMC3-202ENST00000462899 ADRA1BP35368 520 aa7.69□□□□□ -1.18
SMC3-202ENST00000462899 RGRP47804 291 aa7.69□□□□□ -1.18
SMC3-202ENST00000462899 RNASE9P60153 205 aaKnown RBP7.69□□□□□ -1.18
SMC3-202ENST00000462899 RHOAP61586 193 aa7.69□□□□□ -1.18
SMC3-202ENST00000462899 CTBSQ01459 385 aa7.69□□□□□ -1.18
SMC3-202ENST00000462899 ILF3Q12906 894 aaKnown RBP eCLIP7.69□□□□□ -1.18
SMC3-202ENST00000462899 MRPL49Q13405 166 aaKnown RBP7.69□□□□□ -1.18
SMC3-202ENST00000462899 LAMB3Q13751 1172 aa7.69□□□□□ -1.18
SMC3-202ENST00000462899 RAPGEF1Q13905 1077 aa7.69□□□□□ -1.18
SMC3-202ENST00000462899 GRM3Q14832 879 aa7.69□□□□□ -1.18
SMC3-202ENST00000462899 NADK2Q4G0N4 442 aa7.69□□□□□ -1.18
SMC3-202ENST00000462899 PRR30Q53SZ7 412 aaPredicted RBP7.69□□□□□ -1.18
SMC3-202ENST00000462899 FAM102AQ5T9C2 384 aaPredicted RBP7.69□□□□□ -1.18
SMC3-202ENST00000462899 DPY19L2P1Q6NXN4 242 aa7.69□□□□□ -1.18
SMC3-202ENST00000462899 ERAP2Q6P179 960 aa7.69□□□□□ -1.18
SMC3-202ENST00000462899 DPPA4Q7L190 304 aa7.69□□□□□ -1.18
SMC3-202ENST00000462899 SLC47A2Q86VL8 602 aa7.69□□□□□ -1.18
SMC3-202ENST00000462899 FAM114A1Q8IWE2 563 aa7.69□□□□□ -1.18
SMC3-202ENST00000462899 NRSN1Q8IZ57 195 aa7.69□□□□□ -1.18
SMC3-202ENST00000462899 FMR1NBQ8N0W7 255 aaPredicted RBP7.69□□□□□ -1.18
SMC3-202ENST00000462899 CBARPQ8N350 705 aaPredicted RBP7.69□□□□□ -1.18
SMC3-202ENST00000462899 SFRP1Q8N474 314 aa7.69□□□□□ -1.18
SMC3-202ENST00000462899 ESX1Q8N693 406 aa7.69□□□□□ -1.18
SMC3-202ENST00000462899 DHTKD1Q96HY7 919 aaPredicted RBP7.69□□□□□ -1.18
SMC3-202ENST00000462899 SPATA32Q96LK8 384 aa7.69□□□□□ -1.18
SMC3-202ENST00000462899 FAM81BQ96LP2 452 aa7.69□□□□□ -1.18
SMC3-202ENST00000462899 COQ10AQ96MF6 247 aa7.69□□□□□ -1.18
SMC3-202ENST00000462899 ZNF641Q96N77 438 aaPredicted RBP7.69□□□□□ -1.18
SMC3-202ENST00000462899 UCN2Q96RP3 112 aa7.69□□□□□ -1.18
SMC3-202ENST00000462899 TUBGCP5Q96RT8 1024 aa7.69□□□□□ -1.18
SMC3-202ENST00000462899 TRIM55Q9BYV6 548 aa7.69□□□□□ -1.18
SMC3-202ENST00000462899 SIX2Q9NPC8 291 aa7.69□□□□□ -1.18
SMC3-202ENST00000462899 RAB6BQ9NRW1 208 aa7.69□□□□□ -1.18
SMC3-202ENST00000462899 DONSONQ9NYP3 566 aa7.69□□□□□ -1.18
SMC3-202ENST00000462899 APEX2Q9UBZ4 518 aa7.69□□□□□ -1.18
SMC3-202ENST00000462899 HPCAL4Q9UM19 191 aa7.69□□□□□ -1.18
SMC3-202ENST00000462899 SUFUQ9UMX1 484 aa7.69□□□□□ -1.18
SMC3-202ENST00000462899 POLHQ9Y253 713 aa7.69□□□□□ -1.18
SMC3-202ENST00000462899 ZDHHC9Q9Y397 364 aa7.69□□□□□ -1.18
SMC3-202ENST00000462899 MN1Q10571 1320 aaPredicted RBP7.69□□□□□ -1.18
SMC3-202ENST00000462899 FER1L5A0AVI2 2057 aa7.69□□□□□ -1.18
SMC3-202ENST00000462899 NIPBLQ6KC79 2804 aaeCLIP7.69□□□□□ -1.18
SMC3-202ENST00000462899 ZGRF1Q86YA3 2104 aa7.69□□□□□ -1.18
SMC3-202ENST00000462899 MDC1Q14676 2089 aaKnown RBP7.68□□□□□ -1.18
SMC3-202ENST00000462899 FIGNL2A6NMB9 653 aa7.68□□□□□ -1.18
SMC3-202ENST00000462899 TTLL8A6PVC2 850 aa7.68□□□□□ -1.18
SMC3-202ENST00000462899 WASH4PA8MWX3 477 aa7.68□□□□□ -1.18
SMC3-202ENST00000462899 PSMA7O14818 248 aa7.68□□□□□ -1.18
SMC3-202ENST00000462899 BUB1O43683 1085 aa7.68□□□□□ -1.18
SMC3-202ENST00000462899 EML2O95834 649 aa7.68□□□□□ -1.18
SMC3-202ENST00000462899 SOD1P00441 154 aa7.68□□□□□ -1.18
SMC3-202ENST00000462899 IVLP07476 585 aa7.68□□□□□ -1.18
SMC3-202ENST00000462899 ANKRD34CP0C6C1 535 aa7.68□□□□□ -1.18
SMC3-202ENST00000462899 ELFN1P0C7U0 828 aa7.68□□□□□ -1.18
SMC3-202ENST00000462899 PNMA6AP0CW24 399 aaPredicted RBP7.68□□□□□ -1.18
SMC3-202ENST00000462899 SLC9A1P19634 815 aa7.68□□□□□ -1.18
SMC3-202ENST00000462899 TEAD1P28347 426 aa7.68□□□□□ -1.18
SMC3-202ENST00000462899 GRNP28799 593 aaKnown RBP7.68□□□□□ -1.18
SMC3-202ENST00000462899 ADCY8P40145 1251 aa7.68□□□□□ -1.18
SMC3-202ENST00000462899 CSNK1DP48730 415 aa7.68□□□□□ -1.18
SMC3-202ENST00000462899 NDST2P52849 883 aa7.68□□□□□ -1.18
SMC3-202ENST00000462899 COPB1P53618 953 aaKnown RBP7.68□□□□□ -1.18
SMC3-202ENST00000462899 SNX16P57768 344 aa7.68□□□□□ -1.18
SMC3-202ENST00000462899 CDK3Q00526 305 aa7.68□□□□□ -1.18
SMC3-202ENST00000462899 SEMA5AQ13591 1074 aa7.68□□□□□ -1.18
SMC3-202ENST00000462899 KRTAP21-3Q3LHN1 58 aa7.68□□□□□ -1.18
SMC3-202ENST00000462899 C2CD6Q53TS8 623 aa7.68□□□□□ -1.18
SMC3-202ENST00000462899 SLC30A9Q6PML9 568 aa7.68□□□□□ -1.18
SMC3-202ENST00000462899 CAMK1DQ8IU85 385 aa7.68□□□□□ -1.18
SMC3-202ENST00000462899 DEPDC4Q8N2C3 294 aa7.68□□□□□ -1.18
SMC3-202ENST00000462899 CCDC185Q8N715 623 aa7.68□□□□□ -1.18
SMC3-202ENST00000462899 RTL3Q8N8U3 475 aaKnown RBP7.68□□□□□ -1.18
SMC3-202ENST00000462899 SLC37A2Q8TED4 501 aa7.68□□□□□ -1.18
SMC3-202ENST00000462899 CENPIQ92674 756 aaPredicted RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms