RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 RNF112Q9ULX5 631 aa16.9■□□□□ 0.3
ACTB-207ENST00000462494 COMMD3-BMI1R4GMX3 469 aa16.9■□□□□ 0.3
ACTB-207ENST00000462494 F5H5T6 163 aa16.89■□□□□ 0.29
ACTB-207ENST00000462494 TLR5O60602 858 aa16.89■□□□□ 0.29
ACTB-207ENST00000462494 CLASP2O75122 1294 aaKnown RBP16.89■□□□□ 0.29
ACTB-207ENST00000462494 CAPNS1P04632 268 aa16.89■□□□□ 0.29
ACTB-207ENST00000462494 TFAP2AP05549 437 aa16.89■□□□□ 0.29
ACTB-207ENST00000462494 EEF1DP29692 281 aaKnown RBP16.89■□□□□ 0.29
ACTB-207ENST00000462494 GRIA3P42263 894 aa16.89■□□□□ 0.29
ACTB-207ENST00000462494 MAPKAPK2P49137 400 aa16.89■□□□□ 0.29
ACTB-207ENST00000462494 ACADVLP49748 655 aa16.89■□□□□ 0.29
ACTB-207ENST00000462494 ATP4BP51164 291 aa16.89■□□□□ 0.29
ACTB-207ENST00000462494 CCSAPQ6IQ19 270 aaPredicted RBP16.89■□□□□ 0.29
ACTB-207ENST00000462494 PAQR3Q6TCH7 311 aa16.89■□□□□ 0.29
ACTB-207ENST00000462494 AHI1Q8N157 1196 aa16.89■□□□□ 0.29
ACTB-207ENST00000462494 NCSTNQ92542 709 aa16.89■□□□□ 0.29
ACTB-207ENST00000462494 PRICKLE1Q96MT3 831 aaPredicted RBP16.89■□□□□ 0.29
ACTB-207ENST00000462494 CIB1Q99828 191 aa16.89■□□□□ 0.29
ACTB-207ENST00000462494 GPR62Q9BZJ7 368 aa16.89■□□□□ 0.29
ACTB-207ENST00000462494 VCX3AQ9NNX9 186 aa16.89■□□□□ 0.29
ACTB-207ENST00000462494 SEMA4BQ9NPR2 832 aaPredicted RBP16.89■□□□□ 0.29
ACTB-207ENST00000462494 TCRBV3S1A0A5B6 114 aa16.89■□□□□ 0.29
ACTB-207ENST00000462494 FAM92AA1XBS5 289 aa16.89■□□□□ 0.29
ACTB-207ENST00000462494 C7orf72A4D263 438 aa16.89■□□□□ 0.29
ACTB-207ENST00000462494 NCF1BA6NI72 391 aaPredicted RBP16.89■□□□□ 0.29
ACTB-207ENST00000462494 NCF1CA8MVU1 366 aaPredicted RBP16.89■□□□□ 0.29
ACTB-207ENST00000462494 SYN3O14994 580 aa16.89■□□□□ 0.29
ACTB-207ENST00000462494 CRCPO75575 148 aa16.89■□□□□ 0.29
ACTB-207ENST00000462494 IGLV3-27P01718 113 aa16.89■□□□□ 0.29
ACTB-207ENST00000462494 HSPA8P11142 646 aaKnown RBP16.89■□□□□ 0.29
ACTB-207ENST00000462494 PRKAR2AP13861 404 aaKnown RBP16.89■□□□□ 0.29
ACTB-207ENST00000462494 NCF1P14598 390 aaPredicted RBP16.89■□□□□ 0.29
ACTB-207ENST00000462494 ELNP15502 786 aa16.89■□□□□ 0.29
ACTB-207ENST00000462494 PSMC3P17980 439 aa16.89■□□□□ 0.29
ACTB-207ENST00000462494 SLC7A1P30825 629 aa16.89■□□□□ 0.29
ACTB-207ENST00000462494 SCNN1BP51168 640 aa16.89■□□□□ 0.29
ACTB-207ENST00000462494 MBTPS1Q14703 1052 aa16.89■□□□□ 0.29
ACTB-207ENST00000462494 RBBP5Q15291 538 aaKnown RBP16.89■□□□□ 0.29
ACTB-207ENST00000462494 RPS6KA2Q15349 733 aa16.89■□□□□ 0.29
ACTB-207ENST00000462494 SLC5A9Q2M3M2 681 aa16.89■□□□□ 0.29
ACTB-207ENST00000462494 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.89■□□□□ 0.29
ACTB-207ENST00000462494 RNF19BQ6ZMZ0 732 aa16.89■□□□□ 0.29
ACTB-207ENST00000462494 RBM44Q6ZP01 1051 aaKnown RBP16.89■□□□□ 0.29
ACTB-207ENST00000462494 MIER2Q8N344 545 aa16.89■□□□□ 0.29
ACTB-207ENST00000462494 ASB2Q96Q27 587 aa16.89■□□□□ 0.29
ACTB-207ENST00000462494 ATOH8Q96SQ7 321 aa16.89■□□□□ 0.29
ACTB-207ENST00000462494 MRPS26Q9BYN8 205 aaKnown RBP16.89■□□□□ 0.29
ACTB-207ENST00000462494 CCDC68Q9H2F9 335 aa16.89■□□□□ 0.29
ACTB-207ENST00000462494 FNDC3AQ9Y2H6 1198 aaKnown RBP16.89■□□□□ 0.29
ACTB-207ENST00000462494 HTTP42858 3142 aa16.89■□□□□ 0.29
ACTB-207ENST00000462494 A0A1B0GTL3 188 aa16.88■□□□□ 0.29
ACTB-207ENST00000462494 ANGPT2O15123 496 aa16.88■□□□□ 0.29
ACTB-207ENST00000462494 TIPRLO75663 272 aa16.88■□□□□ 0.29
ACTB-207ENST00000462494 NDST3O95803 873 aa16.88■□□□□ 0.29
ACTB-207ENST00000462494 EPOP01588 193 aa16.88■□□□□ 0.29
ACTB-207ENST00000462494 HGFP14210 728 aa16.88■□□□□ 0.29
ACTB-207ENST00000462494 OGNP20774 298 aaKnown RBP16.88■□□□□ 0.29
ACTB-207ENST00000462494 SUOXP51687 545 aa16.88■□□□□ 0.29
ACTB-207ENST00000462494 CYTH1Q15438 398 aa16.88■□□□□ 0.29
ACTB-207ENST00000462494 NADK2Q4G0N4 442 aa16.88■□□□□ 0.29
ACTB-207ENST00000462494 C8orf82Q6P1X6 216 aaPredicted RBP16.88■□□□□ 0.29
ACTB-207ENST00000462494 HACD2Q6Y1H2 254 aa16.88■□□□□ 0.29
ACTB-207ENST00000462494 METTL25Q8N6Q8 603 aa16.88■□□□□ 0.29
ACTB-207ENST00000462494 PCSK9Q8NBP7 692 aaKnown RBP16.88■□□□□ 0.29
ACTB-207ENST00000462494 OR4K2Q8NGD2 314 aa16.88■□□□□ 0.29
ACTB-207ENST00000462494 RHEBL1Q8TAI7 183 aa16.88■□□□□ 0.29
ACTB-207ENST00000462494 RIN3Q8TB24 985 aa16.88■□□□□ 0.29
ACTB-207ENST00000462494 PEX13Q92968 403 aa16.88■□□□□ 0.29
ACTB-207ENST00000462494 ROPN1LQ96C74 230 aa16.88■□□□□ 0.29
ACTB-207ENST00000462494 SLC45A3Q96JT2 553 aa16.88■□□□□ 0.29
ACTB-207ENST00000462494 EFHD1Q9BUP0 239 aa16.88■□□□□ 0.29
ACTB-207ENST00000462494 TFB2MQ9H5Q4 396 aaKnown RBP16.88■□□□□ 0.29
ACTB-207ENST00000462494 PDFQ9HBH1 243 aa16.88■□□□□ 0.29
ACTB-207ENST00000462494 NDUFA13Q9P0J0 144 aa16.88■□□□□ 0.29
ACTB-207ENST00000462494 CNOT11Q9UKZ1 510 aaKnown RBP16.88■□□□□ 0.29
ACTB-207ENST00000462494 CNOT6Q9ULM6 557 aaKnown RBP16.88■□□□□ 0.29
ACTB-207ENST00000462494 SPO11Q9Y5K1 396 aa16.88■□□□□ 0.29
ACTB-207ENST00000462494 SLC4A7Q9Y6M7 1214 aa16.88■□□□□ 0.29
ACTB-207ENST00000462494 MTMR11A4FU01 709 aa16.88■□□□□ 0.29
ACTB-207ENST00000462494 AKAP10O43572 662 aa16.88■□□□□ 0.29
ACTB-207ENST00000462494 FGF4P08620 206 aa16.88■□□□□ 0.29
ACTB-207ENST00000462494 HOXB8P17481 243 aaPredicted RBP16.88■□□□□ 0.29
ACTB-207ENST00000462494 INHBEP58166 350 aa16.88■□□□□ 0.29
ACTB-207ENST00000462494 NKX3-2P78367 333 aa16.88■□□□□ 0.29
ACTB-207ENST00000462494 ECT2LQ008S8 904 aa16.88■□□□□ 0.29
ACTB-207ENST00000462494 DUSP4Q13115 394 aa16.88■□□□□ 0.29
ACTB-207ENST00000462494 IKBKEQ14164 716 aa16.88■□□□□ 0.29
ACTB-207ENST00000462494 CAPRIN1Q14444 709 aaKnown RBP16.88■□□□□ 0.29
ACTB-207ENST00000462494 KANK2Q63ZY3 851 aa16.88■□□□□ 0.29
ACTB-207ENST00000462494 GLT6D1Q7Z4J2 308 aa16.88■□□□□ 0.29
ACTB-207ENST00000462494 SAPCD2Q86UD0 394 aa16.88■□□□□ 0.29
ACTB-207ENST00000462494 BBS5Q8N3I7 341 aa16.88■□□□□ 0.29
ACTB-207ENST00000462494 FBXO39Q8N4B4 442 aa16.88■□□□□ 0.29
ACTB-207ENST00000462494 STAG3L4Q8TBR4 150 aa16.88■□□□□ 0.29
ACTB-207ENST00000462494 SMIM14Q96QK8 99 aa16.88■□□□□ 0.29
ACTB-207ENST00000462494 CINPQ9BW66 212 aaPredicted RBP16.88■□□□□ 0.29
ACTB-207ENST00000462494 TUBB1Q9H4B7 451 aa16.88■□□□□ 0.29
ACTB-207ENST00000462494 ZNF696Q9H7X3 374 aa16.88■□□□□ 0.29
ACTB-207ENST00000462494 POPDC3Q9HBV1 291 aa16.88■□□□□ 0.29
ACTB-207ENST00000462494 TAS2R13Q9NYV9 303 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms