RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 D6RAR5 112 aa18.88■□□□□ 0.61
VARS-220ENST00000461874 KCNK1O00180 336 aa18.88■□□□□ 0.61
VARS-220ENST00000461874 IVLP07476 585 aa18.88■□□□□ 0.61
VARS-220ENST00000461874 MMP2P08253 660 aa18.88■□□□□ 0.61
VARS-220ENST00000461874 GNPDA1P46926 289 aa18.88■□□□□ 0.61
VARS-220ENST00000461874 POLD2P49005 469 aa18.88■□□□□ 0.61
VARS-220ENST00000461874 IFI35P80217 286 aaPredicted RBP18.88■□□□□ 0.61
VARS-220ENST00000461874 ILF3Q12906 894 aaKnown RBP eCLIP18.88■□□□□ 0.61
VARS-220ENST00000461874 TCEAL1Q15170 157 aa18.88■□□□□ 0.61
VARS-220ENST00000461874 CCNJLQ8IV13 435 aa18.88■□□□□ 0.61
VARS-220ENST00000461874 RAVER1Q8IY67 606 aaKnown RBP18.88■□□□□ 0.61
VARS-220ENST00000461874 NRSN1Q8IZ57 195 aa18.88■□□□□ 0.61
VARS-220ENST00000461874 CNTD1Q8N815 330 aa18.88■□□□□ 0.61
VARS-220ENST00000461874 Q8N9G6 341 aaPredicted RBP18.88■□□□□ 0.61
VARS-220ENST00000461874 LPCAT1Q8NF37 534 aa18.88■□□□□ 0.61
VARS-220ENST00000461874 KIAA1524Q8TCG1 905 aa18.88■□□□□ 0.61
VARS-220ENST00000461874 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.88■□□□□ 0.61
VARS-220ENST00000461874 SCARF2Q96GP6 870 aaPredicted RBP18.88■□□□□ 0.61
VARS-220ENST00000461874 LIN37Q96GY3 246 aaPredicted RBP18.88■□□□□ 0.61
VARS-220ENST00000461874 NAF1Q96HR8 494 aaKnown RBP18.88■□□□□ 0.61
VARS-220ENST00000461874 LYSMD1Q96S90 227 aa18.88■□□□□ 0.61
VARS-220ENST00000461874 MAK16Q9BXY0 300 aaKnown RBP18.88■□□□□ 0.61
VARS-220ENST00000461874 GSDMCQ9BYG8 508 aa18.88■□□□□ 0.61
VARS-220ENST00000461874 LRIT1Q9P2V4 623 aa18.88■□□□□ 0.61
VARS-220ENST00000461874 INTUQ9ULD6 942 aa18.88■□□□□ 0.61
VARS-220ENST00000461874 HEY1Q9Y5J3 304 aa18.88■□□□□ 0.61
VARS-220ENST00000461874 RNF215Q9Y6U7 377 aa18.88■□□□□ 0.61
VARS-220ENST00000461874 TMX2-CTNND1H3BSU7 103 aa18.87■□□□□ 0.61
VARS-220ENST00000461874 NUDT21O43809 227 aaKnown RBP18.87■□□□□ 0.61
VARS-220ENST00000461874 FGF1P05230 155 aa18.87■□□□□ 0.61
VARS-220ENST00000461874 PYGLP06737 847 aa18.87■□□□□ 0.61
VARS-220ENST00000461874 MLLT3P42568 568 aaPredicted RBP18.87■□□□□ 0.61
VARS-220ENST00000461874 SLC1A1P43005 524 aa18.87■□□□□ 0.61
VARS-220ENST00000461874 FASNP49327 2511 aaKnown RBP18.87■□□□□ 0.61
VARS-220ENST00000461874 ZBTB17Q13105 803 aa18.87■□□□□ 0.61
VARS-220ENST00000461874 SPRED1Q7Z699 444 aa18.87■□□□□ 0.61
VARS-220ENST00000461874 C17orf82Q86X59 251 aaPredicted RBP18.87■□□□□ 0.61
VARS-220ENST00000461874 BBC3Q96PG8 261 aaPredicted RBP18.87■□□□□ 0.61
VARS-220ENST00000461874 AGAP2Q99490 1192 aa18.87■□□□□ 0.61
VARS-220ENST00000461874 TAAR2Q9P1P5 351 aa18.87■□□□□ 0.61
VARS-220ENST00000461874 KIF26BQ2KJY2 2108 aa18.86■□□□□ 0.61
VARS-220ENST00000461874 CDRT15L2A8MXV6 281 aa18.86■□□□□ 0.61
VARS-220ENST00000461874 APOL1O14791 398 aa18.86■□□□□ 0.61
VARS-220ENST00000461874 CLDN7O95471 211 aa18.86■□□□□ 0.61
VARS-220ENST00000461874 KRT1P04264 644 aa18.86■□□□□ 0.61
VARS-220ENST00000461874 ZFXP17010 805 aaPredicted RBP18.86■□□□□ 0.61
VARS-220ENST00000461874 AK4P27144 223 aaPredicted RBP18.86■□□□□ 0.61
VARS-220ENST00000461874 ADCY8P40145 1251 aa18.86■□□□□ 0.61
VARS-220ENST00000461874 CD86P42081 329 aa18.86■□□□□ 0.61
VARS-220ENST00000461874 INHBCP55103 352 aa18.86■□□□□ 0.61
VARS-220ENST00000461874 SKOR1P84550 965 aa18.86■□□□□ 0.61
VARS-220ENST00000461874 CTBSQ01459 385 aa18.86■□□□□ 0.61
VARS-220ENST00000461874 AP1B1Q10567 949 aa18.86■□□□□ 0.61
VARS-220ENST00000461874 PDK1Q15118 436 aa18.86■□□□□ 0.61
VARS-220ENST00000461874 QPCTQ16769 361 aa18.86■□□□□ 0.61
VARS-220ENST00000461874 FOXR1Q6PIV2 292 aa18.86■□□□□ 0.61
VARS-220ENST00000461874 DOK6Q6PKX4 331 aa18.86■□□□□ 0.61
VARS-220ENST00000461874 RHOT1Q8IXI2 618 aa18.86■□□□□ 0.61
VARS-220ENST00000461874 ARL14Q8N4G2 192 aa18.86■□□□□ 0.61
VARS-220ENST00000461874 ZDHHC1Q8WTX9 485 aa18.86■□□□□ 0.61
VARS-220ENST00000461874 KCNE4Q8WWG9 221 aa18.86■□□□□ 0.61
VARS-220ENST00000461874 RNF25Q96BH1 459 aaPredicted RBP18.86■□□□□ 0.61
VARS-220ENST00000461874 FCRL3Q96P31 734 aaPredicted RBP18.86■□□□□ 0.61
VARS-220ENST00000461874 OLFM3Q96PB7 478 aa18.86■□□□□ 0.61
VARS-220ENST00000461874 RIOK2Q9BVS4 552 aaKnown RBP18.86■□□□□ 0.61
VARS-220ENST00000461874 FOXP3Q9BZS1 431 aa18.86■□□□□ 0.61
VARS-220ENST00000461874 STRADBQ9C0K7 418 aa18.86■□□□□ 0.61
VARS-220ENST00000461874 EPB41L5Q9HCM4 733 aa18.86■□□□□ 0.61
VARS-220ENST00000461874 TMEM98Q9Y2Y6 226 aa18.86■□□□□ 0.61
VARS-220ENST00000461874 ST14Q9Y5Y6 855 aa18.86■□□□□ 0.61
VARS-220ENST00000461874 UNC13CQ8NB66 2214 aa18.86■□□□□ 0.61
VARS-220ENST00000461874 ARHGEF17Q96PE2 2063 aaPredicted RBP18.86■□□□□ 0.61
VARS-220ENST00000461874 ANKRD66B4E2M5 251 aa18.85■□□□□ 0.61
VARS-220ENST00000461874 PLD2O14939 933 aa18.85■□□□□ 0.61
VARS-220ENST00000461874 TNFSF15O95150 251 aa18.85■□□□□ 0.61
VARS-220ENST00000461874 COMTP21964 271 aa18.85■□□□□ 0.61
VARS-220ENST00000461874 CCKBRP32239 447 aa18.85■□□□□ 0.61
VARS-220ENST00000461874 MAZP56270 477 aaKnown RBP18.85■□□□□ 0.61
VARS-220ENST00000461874 EIF3IQ13347 325 aaKnown RBP18.85■□□□□ 0.61
VARS-220ENST00000461874 SLC30A9Q6PML9 568 aa18.85■□□□□ 0.61
VARS-220ENST00000461874 SARM1Q6SZW1 724 aa18.85■□□□□ 0.61
VARS-220ENST00000461874 NPNTQ6UXI9 565 aa18.85■□□□□ 0.61
VARS-220ENST00000461874 CLEC14AQ86T13 490 aa18.85■□□□□ 0.61
VARS-220ENST00000461874 TRIM74Q86UV6 250 aa18.85■□□□□ 0.61
VARS-220ENST00000461874 RFX6Q8HWS3 928 aa18.85■□□□□ 0.61
VARS-220ENST00000461874 COX14Q96I36 57 aa18.85■□□□□ 0.61
VARS-220ENST00000461874 TMEM74Q96NL1 305 aa18.85■□□□□ 0.61
VARS-220ENST00000461874 DPH1Q9BZG8 443 aa18.85■□□□□ 0.61
VARS-220ENST00000461874 DDX56Q9NY93 547 aaKnown RBP18.85■□□□□ 0.61
VARS-220ENST00000461874 ATXN7L1Q9ULK2 861 aaPredicted RBP18.85■□□□□ 0.61
VARS-220ENST00000461874 HYOU1Q9Y4L1 999 aa18.85■□□□□ 0.61
VARS-220ENST00000461874 BPTFQ12830 3046 aa18.85■□□□□ 0.61
VARS-220ENST00000461874 C1orf232A0A0U1RR37 186 aa18.84■□□□□ 0.61
VARS-220ENST00000461874 ITGA2BP08514 1039 aa18.84■□□□□ 0.61
VARS-220ENST00000461874 TNNT1P13805 278 aa18.84■□□□□ 0.61
VARS-220ENST00000461874 B4GALNT1Q00973 533 aa18.84■□□□□ 0.61
VARS-220ENST00000461874 ZFP36L1Q07352 338 aaKnown RBP18.84■□□□□ 0.61
VARS-220ENST00000461874 PEX6Q13608 980 aa18.84■□□□□ 0.61
VARS-220ENST00000461874 PYCR3Q53H96 274 aa18.84■□□□□ 0.61
VARS-220ENST00000461874 ODF2Q5BJF6 829 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms