RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 SOD1P00441 154 aa9.13□□□□□ -0.95
BRCA1-207ENST00000461798 FGF1P05230 155 aa9.13□□□□□ -0.95
BRCA1-207ENST00000461798 RPLP0P05388 317 aaKnown RBP9.13□□□□□ -0.95
BRCA1-207ENST00000461798 IVLP07476 585 aa9.13□□□□□ -0.95
BRCA1-207ENST00000461798 CTPS1P17812 591 aa9.13□□□□□ -0.95
BRCA1-207ENST00000461798 STC1P52823 247 aa9.13□□□□□ -0.95
BRCA1-207ENST00000461798 UCNP55089 124 aa9.13□□□□□ -0.95
BRCA1-207ENST00000461798 IFI35P80217 286 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-207ENST00000461798 B4GALNT1Q00973 533 aa9.13□□□□□ -0.95
BRCA1-207ENST00000461798 DSC2Q02487 901 aa9.13□□□□□ -0.95
BRCA1-207ENST00000461798 ZFP36L1Q07352 338 aaKnown RBP9.13□□□□□ -0.95
BRCA1-207ENST00000461798 PPIDQ08752 370 aaKnown RBP9.13□□□□□ -0.95
BRCA1-207ENST00000461798 ITKQ08881 620 aa9.13□□□□□ -0.95
BRCA1-207ENST00000461798 PEX6Q13608 980 aa9.13□□□□□ -0.95
BRCA1-207ENST00000461798 NR1D2Q14995 579 aa9.13□□□□□ -0.95
BRCA1-207ENST00000461798 PTPRRQ15256 657 aa9.13□□□□□ -0.95
BRCA1-207ENST00000461798 C3orf38Q5JPI3 329 aa9.13□□□□□ -0.95
BRCA1-207ENST00000461798 LRRC66Q68CR7 880 aa9.13□□□□□ -0.95
BRCA1-207ENST00000461798 SLC9A4Q6AI14 798 aa9.13□□□□□ -0.95
BRCA1-207ENST00000461798 GPR155Q7Z3F1 870 aa9.13□□□□□ -0.95
BRCA1-207ENST00000461798 ZNF438Q7Z4V0 828 aa9.13□□□□□ -0.95
BRCA1-207ENST00000461798 RHOT2Q8IXI1 618 aa9.13□□□□□ -0.95
BRCA1-207ENST00000461798 CCDC13Q8IYE1 715 aa9.13□□□□□ -0.95
BRCA1-207ENST00000461798 ARL14Q8N4G2 192 aa9.13□□□□□ -0.95
BRCA1-207ENST00000461798 PLD5Q8N7P1 536 aa9.13□□□□□ -0.95
BRCA1-207ENST00000461798 CNTD1Q8N815 330 aa9.13□□□□□ -0.95
BRCA1-207ENST00000461798 CCL4L1Q8NHW4 92 aa9.13□□□□□ -0.95
BRCA1-207ENST00000461798 KIAA1524Q8TCG1 905 aa9.13□□□□□ -0.95
BRCA1-207ENST00000461798 AP2M1Q96CW1 435 aa9.13□□□□□ -0.95
BRCA1-207ENST00000461798 CCDC97Q96F63 343 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-207ENST00000461798 CCDC42Q96M95 316 aa9.13□□□□□ -0.95
BRCA1-207ENST00000461798 TMEM74Q96NL1 305 aa9.13□□□□□ -0.95
BRCA1-207ENST00000461798 LGMNQ99538 433 aa9.13□□□□□ -0.95
BRCA1-207ENST00000461798 GSDMCQ9BYG8 508 aa9.13□□□□□ -0.95
BRCA1-207ENST00000461798 DPEP2Q9H4A9 486 aa9.13□□□□□ -0.95
BRCA1-207ENST00000461798 DEF6Q9H4E7 631 aa9.13□□□□□ -0.95
BRCA1-207ENST00000461798 NHEJ1Q9H9Q4 299 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-207ENST00000461798 CARS2Q9HA77 564 aaKnown RBP9.13□□□□□ -0.95
BRCA1-207ENST00000461798 ABHD10Q9NUJ1 306 aa9.13□□□□□ -0.95
BRCA1-207ENST00000461798 SPATS2LQ9NUQ6 558 aaKnown RBP9.13□□□□□ -0.95
BRCA1-207ENST00000461798 LRIT1Q9P2V4 623 aa9.13□□□□□ -0.95
BRCA1-207ENST00000461798 INTUQ9ULD6 942 aa9.13□□□□□ -0.95
BRCA1-207ENST00000461798 PCDHGA7Q9Y5G6 932 aa9.13□□□□□ -0.95
BRCA1-207ENST00000461798 RNF215Q9Y6U7 377 aa9.13□□□□□ -0.95
BRCA1-207ENST00000461798 LRRK1Q38SD2 2015 aa9.13□□□□□ -0.95
BRCA1-207ENST00000461798 FASNP49327 2511 aaKnown RBP9.13□□□□□ -0.95
BRCA1-207ENST00000461798 COL27A1Q8IZC6 1860 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-207ENST00000461798 NBEAQ8NFP9 2946 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 TEX51A0A1B0GUA7 166 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 CAPN8A6NHC0 703 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 ANKRD66B4E2M5 251 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 PLD2O14939 933 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 ATXN7O15265 892 aaPredicted RBP9.12□□□□□ -0.95
BRCA1-207ENST00000461798 B4GAT1O43505 415 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 MFAP3LO75121 409 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 TNFSF15O95150 251 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 MAP3K6O95382 1288 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 JCHAINP01591 159 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 HLA-DQB2P05538 268 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 MMP2P08253 660 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 ITGA2BP08514 1039 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 TPM1P09493 284 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 CA4P22748 312 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 SLC1A1P43005 524 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 GPR1P46091 355 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 INHBCP55103 352 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 CTBSQ01459 385 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 ILF3Q12906 894 aaKnown RBP eCLIP9.12□□□□□ -0.95
BRCA1-207ENST00000461798 TBX2Q13207 712 aaPredicted RBP9.12□□□□□ -0.95
BRCA1-207ENST00000461798 SQSTM1Q13501 440 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 MESDQ14696 234 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 TCEA2Q15560 299 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 QPCTQ16769 361 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 DENND2CQ68D51 928 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 RAET1GQ6H3X3 334 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 RFLNAQ6ZTI6 216 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 SPRED1Q7Z699 444 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 B3GNT8Q7Z7M8 397 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 CCNJLQ8IV13 435 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 SFTPA2Q8IWL1 248 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 FBXO39Q8N4B4 442 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 KCNE4Q8WWG9 221 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 SCAMP4Q969E2 229 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 TMEM159Q96B96 161 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 COX14Q96I36 57 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 FCRL3Q96P31 734 aaPredicted RBP9.12□□□□□ -0.95
BRCA1-207ENST00000461798 SMIM14Q96QK8 99 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 STRADBQ9C0K7 418 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 BRD8Q9H0E9 1235 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 TSPY26PQ9H489 355 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 PCDH9Q9HC56 1237 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 TAAR2Q9P1P5 351 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 MOSPD1Q9UJG1 213 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 ACSL6Q9UKU0 697 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 SUFUQ9UMX1 484 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 CHKBQ9Y259 395 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 ST14Q9Y5Y6 855 aa9.12□□□□□ -0.95
BRCA1-207ENST00000461798 A0A0U1RQS6 177 aa9.11□□□□□ -0.95
BRCA1-207ENST00000461798 LRRD1A4D1F6 860 aa9.11□□□□□ -0.95
BRCA1-207ENST00000461798 PMS2P1A4D2B8 440 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms