RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 KIF5CO60282 957 aa10.55□□□□□ -0.72
TRAPPC12-213ENST00000461577 CEP104O60308 925 aa10.55□□□□□ -0.72
TRAPPC12-213ENST00000461577 TRIM16O95361 564 aa10.55□□□□□ -0.72
TRAPPC12-213ENST00000461577 FGF1P05230 155 aa10.55□□□□□ -0.72
TRAPPC12-213ENST00000461577 ANXA6P08133 673 aa10.55□□□□□ -0.72
TRAPPC12-213ENST00000461577 ATXN1LP0C7T5 689 aaKnown RBP10.55□□□□□ -0.72
TRAPPC12-213ENST00000461577 MYCLP1P12525 358 aaPredicted RBP10.55□□□□□ -0.72
TRAPPC12-213ENST00000461577 ACTN2P35609 894 aa10.55□□□□□ -0.72
TRAPPC12-213ENST00000461577 CHRNA4P43681 627 aa10.55□□□□□ -0.72
TRAPPC12-213ENST00000461577 HK3P52790 923 aa10.55□□□□□ -0.72
TRAPPC12-213ENST00000461577 DAB2P98082 770 aa10.55□□□□□ -0.72
TRAPPC12-213ENST00000461577 CDK3Q00526 305 aa10.55□□□□□ -0.72
TRAPPC12-213ENST00000461577 C1orf61Q13536 156 aa10.55□□□□□ -0.72
TRAPPC12-213ENST00000461577 SNX1Q13596 522 aa10.55□□□□□ -0.72
TRAPPC12-213ENST00000461577 SLC1A5Q15758 541 aa10.55□□□□□ -0.72
TRAPPC12-213ENST00000461577 CDKN3Q16667 212 aa10.55□□□□□ -0.72
TRAPPC12-213ENST00000461577 ZNF569Q5MCW4 686 aa10.55□□□□□ -0.72
TRAPPC12-213ENST00000461577 ADAMTSL4Q6UY14 1074 aa10.55□□□□□ -0.72
TRAPPC12-213ENST00000461577 TMC3Q7Z5M5 1100 aa10.55□□□□□ -0.72
TRAPPC12-213ENST00000461577 REXO1L1PQ8IX06 675 aa10.55□□□□□ -0.72
TRAPPC12-213ENST00000461577 FSTL5Q8N475 847 aaPredicted RBP10.55□□□□□ -0.72
TRAPPC12-213ENST00000461577 C1orf54Q8WWF1 131 aa10.55□□□□□ -0.72
TRAPPC12-213ENST00000461577 ATG4AQ8WYN0 398 aa10.55□□□□□ -0.72
TRAPPC12-213ENST00000461577 SCAMP4Q969E2 229 aa10.55□□□□□ -0.72
TRAPPC12-213ENST00000461577 TMEM121Q9BTD3 319 aa10.55□□□□□ -0.72
TRAPPC12-213ENST00000461577 RIOK2Q9BVS4 552 aaKnown RBP10.55□□□□□ -0.72
TRAPPC12-213ENST00000461577 LGR4Q9BXB1 951 aa10.55□□□□□ -0.72
TRAPPC12-213ENST00000461577 TEX101Q9BY14 249 aa10.55□□□□□ -0.72
TRAPPC12-213ENST00000461577 FAM83DQ9H4H8 585 aa10.55□□□□□ -0.72
TRAPPC12-213ENST00000461577 TRABDQ9H4I3 376 aa10.55□□□□□ -0.72
TRAPPC12-213ENST00000461577 CYP4F12Q9HCS2 524 aa10.55□□□□□ -0.72
TRAPPC12-213ENST00000461577 NLGN3Q9NZ94 848 aa10.55□□□□□ -0.72
TRAPPC12-213ENST00000461577 HACD3Q9P035 362 aa10.55□□□□□ -0.72
TRAPPC12-213ENST00000461577 ZNF148Q9UQR1 794 aa10.55□□□□□ -0.72
TRAPPC12-213ENST00000461577 JRKLQ9Y4A0 524 aa10.55□□□□□ -0.72
TRAPPC12-213ENST00000461577 CNOT1A5YKK6 2376 aaKnown RBP10.55□□□□□ -0.72
TRAPPC12-213ENST00000461577 PRSS38A1L453 326 aa10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 TRIM38O00635 465 aa10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 INPP4BO15327 924 aa10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 PSMD3O43242 534 aa10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 GCATO75600 419 aa10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 ASMTLO95671 621 aa10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 AGTP01019 485 aa10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 FGGP02679 453 aa10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 CKMT2P17540 419 aa10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 PMLP29590 882 aa10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 STIP1P31948 543 aaKnown RBP10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 CXCR5P32302 372 aa10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 GDF10P55107 478 aa10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 CCDC173Q0VFZ6 552 aa10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 ELOCQ15369 112 aa10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 TCEA2Q15560 299 aa10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 LONRF2Q1L5Z9 754 aa10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 PARP6Q2NL67 630 aa10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 DEFB133Q30KQ1 61 aa10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 P3H1Q32P28 736 aa10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 ALS2CLQ60I27 953 aa10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 DOK6Q6PKX4 331 aa10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 GLT6D1Q7Z4J2 308 aa10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 SLCO6A1Q86UG4 719 aa10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 GKN2Q86XP6 184 aa10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 SLC35F6Q8N357 371 aa10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 PNPLA1Q8N8W4 532 aa10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 BLOC1S5Q8TDH9 187 aa10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 SCG3Q8WXD2 468 aaKnown RBP10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 OR1E3Q8WZA6 343 aa10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 GLMNQ92990 594 aa10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 PDXPQ96GD0 296 aa10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 HIC2Q96JB3 615 aa10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 AGAP2Q99490 1192 aa10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 TBL1YQ9BQ87 522 aa10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 LRRC61Q9BV99 259 aa10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 SPATA16Q9BXB7 569 aa10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 SUDS3Q9H7L9 328 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 FGF22Q9HCT0 170 aa10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 MRPL40Q9NQ50 206 aaKnown RBP10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 PNMA8BQ9ULN7 279 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 SPO11Q9Y5K1 396 aa10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 DGKBQ9Y6T7 804 aa10.54□□□□□ -0.72
TRAPPC12-213ENST00000461577 LMO7DNF2Z398 122 aa10.53□□□□□ -0.72
TRAPPC12-213ENST00000461577 TPP1O14773 563 aa10.53□□□□□ -0.72
TRAPPC12-213ENST00000461577 AURKAO14965 403 aa10.53□□□□□ -0.72
TRAPPC12-213ENST00000461577 SOD1P00441 154 aa10.53□□□□□ -0.72
TRAPPC12-213ENST00000461577 IFNB1P01574 187 aa10.53□□□□□ -0.72
TRAPPC12-213ENST00000461577 GNPDA1P46926 289 aa10.53□□□□□ -0.72
TRAPPC12-213ENST00000461577 LMAN1P49257 510 aa10.53□□□□□ -0.72
TRAPPC12-213ENST00000461577 DUSP3P51452 185 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC12-213ENST00000461577 DCDC1P59894 354 aa10.53□□□□□ -0.72
TRAPPC12-213ENST00000461577 DNAJC3Q13217 504 aa10.53□□□□□ -0.72
TRAPPC12-213ENST00000461577 OASLQ15646 514 aaKnown RBP10.53□□□□□ -0.72
TRAPPC12-213ENST00000461577 CCNG2Q16589 344 aa10.53□□□□□ -0.72
TRAPPC12-213ENST00000461577 PROX2Q3B8N5 592 aa10.53□□□□□ -0.72
TRAPPC12-213ENST00000461577 HENMT1Q5T8I9 393 aaKnown RBP10.53□□□□□ -0.72
TRAPPC12-213ENST00000461577 ZCCHC8Q6NZY4 707 aaKnown RBP10.53□□□□□ -0.72
TRAPPC12-213ENST00000461577 SDR16C5Q8N3Y7 309 aa10.53□□□□□ -0.72
TRAPPC12-213ENST00000461577 CCDC89Q8N998 374 aa10.53□□□□□ -0.72
TRAPPC12-213ENST00000461577 ADAMTS14Q8WXS8 1223 aa10.53□□□□□ -0.72
TRAPPC12-213ENST00000461577 PBKQ96KB5 322 aa10.53□□□□□ -0.72
TRAPPC12-213ENST00000461577 APOLD1Q96LR9 279 aa10.53□□□□□ -0.72
TRAPPC12-213ENST00000461577 WDR24Q96S15 920 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms