RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 CSO75390 466 aaKnown RBP16.06■□□□□ 0.16
COL7A1-203ENST00000459756 CLDN7O95471 211 aa16.06■□□□□ 0.16
COL7A1-203ENST00000459756 SOD1P00441 154 aa16.06■□□□□ 0.16
COL7A1-203ENST00000459756 PTPN3P26045 913 aa16.06■□□□□ 0.16
COL7A1-203ENST00000459756 CDC25BP30305 580 aa16.06■□□□□ 0.16
COL7A1-203ENST00000459756 CTNNA1P35221 906 aaKnown RBP16.06■□□□□ 0.16
COL7A1-203ENST00000459756 VAV2P52735 878 aa16.06■□□□□ 0.16
COL7A1-203ENST00000459756 NAP1L1P55209 391 aaKnown RBP16.06■□□□□ 0.16
COL7A1-203ENST00000459756 COPS2P61201 443 aa16.06■□□□□ 0.16
COL7A1-203ENST00000459756 ADCY2Q08462 1091 aa16.06■□□□□ 0.16
COL7A1-203ENST00000459756 LLGL1Q15334 1064 aa16.06■□□□□ 0.16
COL7A1-203ENST00000459756 PERM1Q5SV97 790 aa16.06■□□□□ 0.16
COL7A1-203ENST00000459756 B4GALNT4Q76KP1 1039 aa16.06■□□□□ 0.16
COL7A1-203ENST00000459756 FAM46DQ8NEK8 389 aa16.06■□□□□ 0.16
COL7A1-203ENST00000459756 KIAA1524Q8TCG1 905 aa16.06■□□□□ 0.16
COL7A1-203ENST00000459756 CCHCR1Q8TD31 782 aa16.06■□□□□ 0.16
COL7A1-203ENST00000459756 SCAMP4Q969E2 229 aa16.06■□□□□ 0.16
COL7A1-203ENST00000459756 GRAMD1AQ96CP6 724 aa16.06■□□□□ 0.16
COL7A1-203ENST00000459756 TEKT5Q96M29 485 aa16.06■□□□□ 0.16
COL7A1-203ENST00000459756 TRIB3Q96RU7 358 aa16.06■□□□□ 0.16
COL7A1-203ENST00000459756 GLOD4Q9HC38 313 aa16.06■□□□□ 0.16
COL7A1-203ENST00000459756 TRNAU1APQ9NX07 287 aaKnown RBP16.06■□□□□ 0.16
COL7A1-203ENST00000459756 RAXQ9Y2V3 346 aa16.06■□□□□ 0.16
COL7A1-203ENST00000459756 AK5Q9Y6K8 562 aa16.06■□□□□ 0.16
COL7A1-203ENST00000459756 DUSP10Q9Y6W6 482 aa16.06■□□□□ 0.16
COL7A1-203ENST00000459756 ZFHX4Q86UP3 3567 aa16.06■□□□□ 0.16
COL7A1-203ENST00000459756 CHD6Q8TD26 2715 aa16.05■□□□□ 0.16
COL7A1-203ENST00000459756 CELSR3Q9NYQ7 3312 aa16.05■□□□□ 0.16
COL7A1-203ENST00000459756 RP1P56715 2156 aa16.05■□□□□ 0.16
COL7A1-203ENST00000459756 PJA2O43164 708 aa16.05■□□□□ 0.16
COL7A1-203ENST00000459756 TCEA3O75764 348 aa16.05■□□□□ 0.16
COL7A1-203ENST00000459756 IVLP07476 585 aa16.05■□□□□ 0.16
COL7A1-203ENST00000459756 SPINT3P49223 89 aa16.05■□□□□ 0.16
COL7A1-203ENST00000459756 CDK18Q07002 472 aa16.05■□□□□ 0.16
COL7A1-203ENST00000459756 ILF3Q12906 894 aaKnown RBP eCLIP16.05■□□□□ 0.16
COL7A1-203ENST00000459756 GALNT3Q14435 633 aa16.05■□□□□ 0.16
COL7A1-203ENST00000459756 OGFOD3Q6PK18 319 aa16.05■□□□□ 0.16
COL7A1-203ENST00000459756 RBM44Q6ZP01 1051 aaKnown RBP16.05■□□□□ 0.16
COL7A1-203ENST00000459756 BBS12Q6ZW61 710 aa16.05■□□□□ 0.16
COL7A1-203ENST00000459756 KIAA1328Q86T90 577 aa16.05■□□□□ 0.16
COL7A1-203ENST00000459756 TXLNBQ8N3L3 684 aa16.05■□□□□ 0.16
COL7A1-203ENST00000459756 ACRBPQ8NEB7 543 aa16.05■□□□□ 0.16
COL7A1-203ENST00000459756 GPR156Q8NFN8 814 aa16.05■□□□□ 0.16
COL7A1-203ENST00000459756 GPBAR1Q8TDU6 330 aa16.05■□□□□ 0.16
COL7A1-203ENST00000459756 HIC2Q96JB3 615 aa16.05■□□□□ 0.16
COL7A1-203ENST00000459756 VAT1Q99536 393 aa16.05■□□□□ 0.16
COL7A1-203ENST00000459756 CCDC3Q9BQI4 270 aa16.05■□□□□ 0.16
COL7A1-203ENST00000459756 RIOK2Q9BVS4 552 aaKnown RBP16.05■□□□□ 0.16
COL7A1-203ENST00000459756 GSDMCQ9BYG8 508 aa16.05■□□□□ 0.16
COL7A1-203ENST00000459756 LACRTQ9GZZ8 138 aa16.05■□□□□ 0.16
COL7A1-203ENST00000459756 GRPEL1Q9HAV7 217 aa16.05■□□□□ 0.16
COL7A1-203ENST00000459756 PKD2L2Q9NZM6 624 aa16.05■□□□□ 0.16
COL7A1-203ENST00000459756 SUFUQ9UMX1 484 aa16.05■□□□□ 0.16
COL7A1-203ENST00000459756 EFR3BQ9Y2G0 817 aa16.05■□□□□ 0.16
COL7A1-203ENST00000459756 PCDHB1Q9Y5F3 818 aa16.05■□□□□ 0.16
COL7A1-203ENST00000459756 PCDHA3Q9Y5H8 950 aa16.05■□□□□ 0.16
COL7A1-203ENST00000459756 LAMA5O15230 3695 aa16.05■□□□□ 0.16
COL7A1-203ENST00000459756 CCDC66A2RUB6 948 aa16.04■□□□□ 0.16
COL7A1-203ENST00000459756 HACD1B0YJ81 288 aa16.04■□□□□ 0.16
COL7A1-203ENST00000459756 FUCA1P04066 466 aa16.04■□□□□ 0.16
COL7A1-203ENST00000459756 GNPDA1P46926 289 aa16.04■□□□□ 0.16
COL7A1-203ENST00000459756 POLD2P49005 469 aa16.04■□□□□ 0.16
COL7A1-203ENST00000459756 WASHC5Q12768 1159 aa16.04■□□□□ 0.16
COL7A1-203ENST00000459756 XRCC4Q13426 336 aa16.04■□□□□ 0.16
COL7A1-203ENST00000459756 PEX6Q13608 980 aa16.04■□□□□ 0.16
COL7A1-203ENST00000459756 PCSK7Q16549 785 aa16.04■□□□□ 0.16
COL7A1-203ENST00000459756 ISXQ2M1V0 245 aa16.04■□□□□ 0.16
COL7A1-203ENST00000459756 CCDC70Q6NSX1 233 aa16.04■□□□□ 0.16
COL7A1-203ENST00000459756 ZC3H18Q86VM9 953 aaKnown RBP16.04■□□□□ 0.16
COL7A1-203ENST00000459756 TMEM139Q8IV31 216 aa16.04■□□□□ 0.16
COL7A1-203ENST00000459756 SPATA22Q8NHS9 363 aa16.04■□□□□ 0.16
COL7A1-203ENST00000459756 CCDC74AQ96AQ1 378 aa16.04■□□□□ 0.16
COL7A1-203ENST00000459756 SCARF2Q96GP6 870 aaPredicted RBP16.04■□□□□ 0.16
COL7A1-203ENST00000459756 COX14Q96I36 57 aa16.04■□□□□ 0.16
COL7A1-203ENST00000459756 QKIQ96PU8 341 aaKnown RBP eCLIP16.04■□□□□ 0.16
COL7A1-203ENST00000459756 AGAP2Q99490 1192 aa16.04■□□□□ 0.16
COL7A1-203ENST00000459756 HEMGNQ9BXL5 484 aa16.04■□□□□ 0.16
COL7A1-203ENST00000459756 DPEP2Q9H4A9 486 aa16.04■□□□□ 0.16
COL7A1-203ENST00000459756 FAM83DQ9H4H8 585 aa16.04■□□□□ 0.16
COL7A1-203ENST00000459756 ZFYVE1Q9HBF4 777 aa16.04■□□□□ 0.16
COL7A1-203ENST00000459756 MAGEE1Q9HCI5 957 aa16.04■□□□□ 0.16
COL7A1-203ENST00000459756 B4DGG1 531 aa16.03■□□□□ 0.16
COL7A1-203ENST00000459756 APOC4-APOC2K7ER74 178 aa16.03■□□□□ 0.16
COL7A1-203ENST00000459756 USP12O75317 370 aa16.03■□□□□ 0.16
COL7A1-203ENST00000459756 PMPCBO75439 489 aa16.03■□□□□ 0.16
COL7A1-203ENST00000459756 NDST3O95803 873 aa16.03■□□□□ 0.16
COL7A1-203ENST00000459756 MT-CYBP00156 380 aaPredicted RBP16.03■□□□□ 0.16
COL7A1-203ENST00000459756 APOC2P02655 101 aa16.03■□□□□ 0.16
COL7A1-203ENST00000459756 CTNNA2P26232 953 aa16.03■□□□□ 0.16
COL7A1-203ENST00000459756 SPIDRQ14159 915 aa16.03■□□□□ 0.16
COL7A1-203ENST00000459756 C14orf28Q4W4Y0 310 aa16.03■□□□□ 0.16
COL7A1-203ENST00000459756 FAM182AQ5T1J6 154 aa16.03■□□□□ 0.16
COL7A1-203ENST00000459756 CERCAMQ5T4B2 595 aa16.03■□□□□ 0.16
COL7A1-203ENST00000459756 HENMT1Q5T8I9 393 aaKnown RBP16.03■□□□□ 0.16
COL7A1-203ENST00000459756 CCDC181Q5TID7 509 aa16.03■□□□□ 0.16
COL7A1-203ENST00000459756 DOK6Q6PKX4 331 aa16.03■□□□□ 0.16
COL7A1-203ENST00000459756 LYSMD3Q7Z3D4 306 aa16.03■□□□□ 0.16
COL7A1-203ENST00000459756 KDELC2Q7Z4H8 507 aa16.03■□□□□ 0.16
COL7A1-203ENST00000459756 LRRC57Q8N9N7 239 aa16.03■□□□□ 0.16
COL7A1-203ENST00000459756 CCL4L1Q8NHW4 92 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms