RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 CYBBP04839 570 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 CYP11A1P05108 521 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 JUNP05412 331 aaKnown RBP3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 ANXA6P08133 673 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 FGF4P08620 206 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 SERPINF2P08697 491 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 F7P08709 466 aaPredicted RBP3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 ENO2P09104 434 aaPredicted RBP3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 UROSP10746 265 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 CDK4P11802 303 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 CDH1P12830 882 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 HGFP14210 728 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 PCSK2P16519 638 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 MSH3P20585 1137 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 CES1P23141 567 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 EEF1B2P24534 225 aaKnown RBP3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 YWHAQP27348 245 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 ARNTP27540 789 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 DCKP27707 260 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 HTR1EP28566 365 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 EEF1DP29692 281 aaKnown RBP3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 RFC2P35250 354 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 PBX3P40426 434 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 ARL1P40616 181 aaPredicted RBP3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 CASP2P42575 452 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 CHRNA4P43681 627 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 SERPINB10P48595 397 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 HLCSP50747 726 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 SCNN1GP51170 649 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 GALK1P51570 392 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 PSMD7P51665 324 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 SUOXP51687 545 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 CLCNKBP51801 687 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 POLR2JP52435 117 aaKnown RBP3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 SLC5A3P53794 718 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 TMBIM6P55061 237 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 C21orf59P57076 290 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 YBEYP58557 167 aaPredicted RBP3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 GABARAPL2P60520 117 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 C1QTNF8P60827 252 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 ERVK-8P63133 956 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 CLCQ05315 142 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 LIPEQ05469 1076 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 CHRNB3Q05901 458 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 IL10RBQ08334 325 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 TUSC3Q13454 348 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 ITGA7Q13683 1181 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 BTG3Q14201 252 aaPredicted RBP3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 GK3PQ14409 553 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 MYBPC3Q14896 1274 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 C16orf72Q14CZ0 275 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 POLD3Q15054 466 aaPredicted RBP3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 NFE2Q16621 373 aaPredicted RBP3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 PPP1R3AQ16821 1122 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 PFKFB4Q16877 469 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 FAM110CQ1W6H9 321 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 RFX4Q33E94 735 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 PARP15Q460N3 678 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 SLC36A3Q495N2 470 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 VPS26BQ4G0F5 336 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 ATP6AP1LQ52LC2 224 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 SLC44A4Q53GD3 710 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 UNC50Q53HI1 259 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 NHSL2Q5HYW2 709 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 SIRPB2Q5JXA9 342 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 RBM48Q5RL73 367 aaKnown RBP3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 GPR158Q5T848 1215 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 MANEALQ5VSG8 457 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 TTC23Q5W5X9 447 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 AFMIDQ63HM1 303 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 CLEC6AQ6EIG7 209 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 OGFOD2Q6N063 350 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 HMBOX1Q6NT76 420 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 MSANTD2Q6P1R3 559 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 C8orf82Q6P1X6 216 aaPredicted RBP3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 FAM171BQ6P995 826 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 ZNF773Q6PK81 442 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 ISLR2Q6UXK2 745 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 ARHGAP36Q6ZRI8 547 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 GPRIN3Q6ZVF9 776 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 FRA10AC1Q70Z53 315 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 LARP4Q71RC2 724 aaKnown RBP eCLIP3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 KDELC2Q7Z4H8 507 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 GPR180Q86V85 440 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 MON1AQ86VX9 555 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 PTRH1Q86Y79 214 aaKnown RBP3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 SPPL2CQ8IUH8 684 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 MFSD6LQ8IWD5 586 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 SCN4BQ8IWT1 228 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 FAM9CQ8IZT9 166 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 C8orf59Q8N0T1 100 aaPredicted RBP3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 CLEC4FQ8N1N0 589 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 STK40Q8N2I9 435 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 SVOPLQ8N434 492 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 SFRP1Q8N474 314 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 TTC30BQ8N4P2 665 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 SMYD1Q8NB12 490 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 RNF169Q8NCN4 708 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 ARRDC4Q8NCT1 418 aa3.32□□□□□ -1.88
HMGN1P18-201ENST00000457642 ZMIZ2Q8NF64 920 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms