RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 ZNF540Q8NDQ6 660 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 UHMK1Q8TAS1 419 aaKnown RBP5.21□□□□□ -1.58
CSMD3-204ENST00000455883 IGDCC4Q8TDY8 1250 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 TM9SF2Q99805 663 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 KCNF1Q9H3M0 494 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 NELFAQ9H3P2 528 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 PRKAG3Q9UGI9 489 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 COL1A2P08123 1366 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 PRAF2O60831 178 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 ANXA5P08758 320 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 ANXA3P12429 323 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 ZNF143P52747 638 aaPredicted RBP5.21□□□□□ -1.58
CSMD3-204ENST00000455883 PTSQ03393 145 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 STK32CQ86UX6 486 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 FTMTQ8N4E7 242 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 UTP15Q8TED0 518 aaKnown RBP5.21□□□□□ -1.58
CSMD3-204ENST00000455883 NAT14Q8WUY8 206 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 STON2Q8WXE9 905 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 KCTD13Q8WZ19 329 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 NODALQ96S42 347 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 CCDC32Q9BV29 185 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 TMEM117Q9H0C3 514 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 USP20Q9Y2K6 914 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 PCDHB12Q9Y5F1 795 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 NPHP4O75161 1426 aaPredicted RBP5.21□□□□□ -1.58
CSMD3-204ENST00000455883 KRT33AO76009 404 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 OR6B1O95007 311 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 ASMTLO95671 621 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 ECT2LQ008S8 904 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 MBTD1Q05BQ5 628 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 TMEM31Q5JXX7 168 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 NKAPLQ5M9Q1 402 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 NT5DC3Q86UY8 548 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 RELL1Q8IUW5 271 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 RBFAQ8N0V3 343 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 FAM71DQ8N9W8 422 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 ARL5BQ96KC2 179 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 SLC7A5P2Q9GIP4 190 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 POLR1BQ9H9Y6 1135 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 RAVER2Q9HCJ3 691 aaKnown RBP5.21□□□□□ -1.58
CSMD3-204ENST00000455883 PRDM5Q9NQX1 630 aaPredicted RBP5.21□□□□□ -1.58
CSMD3-204ENST00000455883 PLLPQ9Y342 182 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 SLC33A1O00400 549 aaPredicted RBP5.21□□□□□ -1.58
CSMD3-204ENST00000455883 MEDAGQ5VYS4 303 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 KAT5Q92993 513 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 GREM2Q9H772 168 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 NEUROD4Q9HD90 331 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 SCP2D1Q9UJQ7 156 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 COQ6Q9Y2Z9 468 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 ZDHHC9Q9Y397 364 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 BCKDKO14874 412 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 PMPCBO75439 489 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 GJB6O95452 261 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 TFRCP02786 760 aaKnown RBP5.21□□□□□ -1.58
CSMD3-204ENST00000455883 ICAM1P05362 532 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 ERVK-10P10266 1014 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 SLC15A1P46059 708 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 BAG6P46379 1132 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 ADAM15Q13444 863 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 G2E3Q7L622 706 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 SDR16C5Q8N3Y7 309 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 IL17REQ8NFR9 667 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 OTUB2Q96DC9 234 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 METTL2AQ96IZ6 378 aaKnown RBP5.21□□□□□ -1.58
CSMD3-204ENST00000455883 MEPEQ9NQ76 525 aaPredicted RBP5.21□□□□□ -1.58
CSMD3-204ENST00000455883 XPR1Q9UBH6 696 aa5.21□□□□□ -1.58
CSMD3-204ENST00000455883 NCKAP5O14513 1909 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 PRODHO43272 600 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 RDH16O75452 317 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 RP2O75695 350 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 PIGNO95427 931 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 PORP16435 677 aaPredicted RBP5.2□□□□□ -1.58
CSMD3-204ENST00000455883 EPHB2P29323 1055 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 APLP1P51693 650 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 MRPS10P82664 201 aaKnown RBP5.2□□□□□ -1.58
CSMD3-204ENST00000455883 SRSF11Q05519 484 aaKnown RBP5.2□□□□□ -1.58
CSMD3-204ENST00000455883 E2F2Q14209 437 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 SEMA3AQ14563 771 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 OR5T2Q8NGG2 359 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 PLEKHO2Q8TD55 490 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 ART4Q93070 314 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 PABPC5Q96DU9 382 aaKnown RBP5.2□□□□□ -1.58
CSMD3-204ENST00000455883 ATXN3LQ9H3M9 355 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 SCUBE2Q9NQ36 999 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 E2F8A0AVK6 867 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 NAP1L6A6NFF2 107 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 NOTOA8MTQ0 251 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 M0R233 179 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 CDC40O60508 579 aaKnown RBP eCLIP5.2□□□□□ -1.58
CSMD3-204ENST00000455883 FGFR2P21802 821 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 RPL10P27635 214 aaKnown RBP5.2□□□□□ -1.58
CSMD3-204ENST00000455883 TRIM23P36406 574 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 RAB10P61026 200 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 LRRC14Q15048 493 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 EMC10Q5UCC4 262 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 PHF13Q86YI8 300 aaPredicted RBP5.2□□□□□ -1.58
CSMD3-204ENST00000455883 GPSM1Q86YR5 675 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 GRAMD1CQ8IYS0 662 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 FAM71AQ8IYT1 594 aa5.2□□□□□ -1.58
CSMD3-204ENST00000455883 ADGRF4Q8IZF3 695 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms