RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 GBA3Q9H227 469 aa17.3■□□□□ 0.36
USP39-208ENST00000455732 MAGEE1Q9HCI5 957 aa17.3■□□□□ 0.36
USP39-208ENST00000455732 PHPT1Q9NRX4 125 aaPredicted RBP17.3■□□□□ 0.36
USP39-208ENST00000455732 KLQ9UEF7 1012 aa17.3■□□□□ 0.36
USP39-208ENST00000455732 U3KQA8 63 aa17.3■□□□□ 0.36
USP39-208ENST00000455732 COL27A1Q8IZC6 1860 aaPredicted RBP17.29■□□□□ 0.36
USP39-208ENST00000455732 A0A0U1RQS6 177 aa17.29■□□□□ 0.36
USP39-208ENST00000455732 C1orf232A0A0U1RR37 186 aa17.29■□□□□ 0.36
USP39-208ENST00000455732 LOC285095A0A1B0GVY8 99 aa17.29■□□□□ 0.36
USP39-208ENST00000455732 RGSL1A5PLK6 1076 aa17.29■□□□□ 0.36
USP39-208ENST00000455732 GCATO75600 419 aa17.29■□□□□ 0.36
USP39-208ENST00000455732 CLDN7O95471 211 aa17.29■□□□□ 0.36
USP39-208ENST00000455732 SOD1P00441 154 aa17.29■□□□□ 0.36
USP39-208ENST00000455732 EPOP01588 193 aa17.29■□□□□ 0.36
USP39-208ENST00000455732 CLDN6P56747 220 aa17.29■□□□□ 0.36
USP39-208ENST00000455732 SRP54P61011 504 aaKnown RBP17.29■□□□□ 0.36
USP39-208ENST00000455732 PCSK7Q16549 785 aa17.29■□□□□ 0.36
USP39-208ENST00000455732 FAXCQ5TGI0 409 aa17.29■□□□□ 0.36
USP39-208ENST00000455732 ITPRIPL1Q6GPH6 555 aa17.29■□□□□ 0.36
USP39-208ENST00000455732 ADAMTSL4Q6UY14 1074 aa17.29■□□□□ 0.36
USP39-208ENST00000455732 HEATR4Q86WZ0 1026 aa17.29■□□□□ 0.36
USP39-208ENST00000455732 SDR16C5Q8N3Y7 309 aa17.29■□□□□ 0.36
USP39-208ENST00000455732 FSTL5Q8N475 847 aaPredicted RBP17.29■□□□□ 0.36
USP39-208ENST00000455732 LMX1AQ8TE12 382 aa17.29■□□□□ 0.36
USP39-208ENST00000455732 AP2M1Q96CW1 435 aa17.29■□□□□ 0.36
USP39-208ENST00000455732 OXNAD1Q96HP4 312 aaPredicted RBP17.29■□□□□ 0.36
USP39-208ENST00000455732 SRPK1Q96SB4 655 aaKnown RBP17.29■□□□□ 0.36
USP39-208ENST00000455732 ABCG8Q9H221 673 aa17.29■□□□□ 0.36
USP39-208ENST00000455732 USP29Q9HBJ7 922 aa17.29■□□□□ 0.36
USP39-208ENST00000455732 FGF22Q9HCT0 170 aa17.29■□□□□ 0.36
USP39-208ENST00000455732 PPP2R2CQ9Y2T4 447 aa17.29■□□□□ 0.36
USP39-208ENST00000455732 ZFYVE26Q68DK2 2539 aa17.28■□□□□ 0.36
USP39-208ENST00000455732 TMEM202A6NGA9 273 aa17.28■□□□□ 0.36
USP39-208ENST00000455732 LMO7DNF2Z398 122 aa17.28■□□□□ 0.36
USP39-208ENST00000455732 TAF4O00268 1085 aa17.28■□□□□ 0.36
USP39-208ENST00000455732 PMPCBO75439 489 aa17.28■□□□□ 0.36
USP39-208ENST00000455732 STK10O94804 968 aaKnown RBP17.28■□□□□ 0.36
USP39-208ENST00000455732 PTMAP06454 111 aaKnown RBP17.28■□□□□ 0.36
USP39-208ENST00000455732 SPINT3P49223 89 aa17.28■□□□□ 0.36
USP39-208ENST00000455732 WNT3AP56704 352 aa17.28■□□□□ 0.36
USP39-208ENST00000455732 DAB2P98082 770 aa17.28■□□□□ 0.36
USP39-208ENST00000455732 CDK3Q00526 305 aa17.28■□□□□ 0.36
USP39-208ENST00000455732 MPP3Q13368 585 aa17.28■□□□□ 0.36
USP39-208ENST00000455732 ELOCQ15369 112 aa17.28■□□□□ 0.36
USP39-208ENST00000455732 PRRT3Q5FWE3 981 aa17.28■□□□□ 0.36
USP39-208ENST00000455732 MEI1Q5TIA1 1274 aa17.28■□□□□ 0.36
USP39-208ENST00000455732 RAET1GQ6H3X3 334 aa17.28■□□□□ 0.36
USP39-208ENST00000455732 CCDC70Q6NSX1 233 aa17.28■□□□□ 0.36
USP39-208ENST00000455732 ZCCHC8Q6NZY4 707 aaKnown RBP17.28■□□□□ 0.36
USP39-208ENST00000455732 DARS2Q6PI48 645 aaKnown RBP17.28■□□□□ 0.36
USP39-208ENST00000455732 RFLNAQ6ZTI6 216 aa17.28■□□□□ 0.36
USP39-208ENST00000455732 CCHCR1Q8TD31 782 aa17.28■□□□□ 0.36
USP39-208ENST00000455732 OR1E3Q8WZA6 343 aa17.28■□□□□ 0.36
USP39-208ENST00000455732 TSACCQ96A04 125 aaPredicted RBP17.28■□□□□ 0.36
USP39-208ENST00000455732 PDXPQ96GD0 296 aa17.28■□□□□ 0.36
USP39-208ENST00000455732 SPATA13Q96N96 652 aa17.28■□□□□ 0.36
USP39-208ENST00000455732 LGR4Q9BXB1 951 aa17.28■□□□□ 0.36
USP39-208ENST00000455732 CLPBQ9H078 707 aa17.28■□□□□ 0.36
USP39-208ENST00000455732 C10orf88Q9H8K7 445 aa17.28■□□□□ 0.36
USP39-208ENST00000455732 LZTFL1Q9NQ48 299 aa17.28■□□□□ 0.36
USP39-208ENST00000455732 NCKIPSDQ9NZQ3 722 aa17.28■□□□□ 0.36
USP39-208ENST00000455732 NFKBIL1Q9UBC1 381 aaPredicted RBP17.28■□□□□ 0.36
USP39-208ENST00000455732 RSPH14Q9UHP6 348 aa17.28■□□□□ 0.36
USP39-208ENST00000455732 CACNA1GO43497 2377 aa17.27■□□□□ 0.36
USP39-208ENST00000455732 SRRM3A6NNA2 597 aaPredicted RBP17.27■□□□□ 0.36
USP39-208ENST00000455732 KCNN4O15554 427 aa17.27■□□□□ 0.36
USP39-208ENST00000455732 MYF5P13349 255 aa17.27■□□□□ 0.36
USP39-208ENST00000455732 GPR1P46091 355 aa17.27■□□□□ 0.36
USP39-208ENST00000455732 RPS6KA1Q15418 735 aa17.27■□□□□ 0.36
USP39-208ENST00000455732 HENMT1Q5T8I9 393 aaKnown RBP17.27■□□□□ 0.36
USP39-208ENST00000455732 SEL1L2Q5TEA6 688 aa17.27■□□□□ 0.36
USP39-208ENST00000455732 HES3Q5TGS1 186 aa17.27■□□□□ 0.36
USP39-208ENST00000455732 KCTD16Q68DU8 428 aa17.27■□□□□ 0.36
USP39-208ENST00000455732 NYAP1Q6ZVC0 841 aa17.27■□□□□ 0.36
USP39-208ENST00000455732 LYSMD3Q7Z3D4 306 aa17.27■□□□□ 0.36
USP39-208ENST00000455732 KDELC2Q7Z4H8 507 aa17.27■□□□□ 0.36
USP39-208ENST00000455732 HID1Q8IV36 788 aa17.27■□□□□ 0.36
USP39-208ENST00000455732 TRIM58Q8NG06 486 aa17.27■□□□□ 0.36
USP39-208ENST00000455732 SLC35B2Q8TB61 432 aa17.27■□□□□ 0.36
USP39-208ENST00000455732 SCAMP4Q969E2 229 aa17.27■□□□□ 0.36
USP39-208ENST00000455732 EID2BQ96D98 161 aa17.27■□□□□ 0.36
USP39-208ENST00000455732 MRGPRX2Q96LB1 330 aa17.27■□□□□ 0.36
USP39-208ENST00000455732 PPP1R2P1Q96PQ5 205 aa17.27■□□□□ 0.36
USP39-208ENST00000455732 FAM118BQ9BPY3 351 aa17.27■□□□□ 0.36
USP39-208ENST00000455732 FRMD8Q9BZ67 464 aaPredicted RBP17.27■□□□□ 0.36
USP39-208ENST00000455732 CDH19Q9H159 772 aa17.27■□□□□ 0.36
USP39-208ENST00000455732 CARD9Q9H257 536 aa17.27■□□□□ 0.36
USP39-208ENST00000455732 ZFYVE1Q9HBF4 777 aa17.27■□□□□ 0.36
USP39-208ENST00000455732 UBP1Q9NZI7 540 aa17.27■□□□□ 0.36
USP39-208ENST00000455732 PKD2L2Q9NZM6 624 aa17.27■□□□□ 0.36
USP39-208ENST00000455732 CD84Q9UIB8 345 aa17.27■□□□□ 0.36
USP39-208ENST00000455732 ZNF711Q9Y462 761 aa17.27■□□□□ 0.36
USP39-208ENST00000455732 URB1O60287 2271 aaKnown RBP17.27■□□□□ 0.35
USP39-208ENST00000455732 ZFC3H1O60293 1989 aaKnown RBP17.26■□□□□ 0.35
USP39-208ENST00000455732 TRABD2BA6NFA1 517 aa17.26■□□□□ 0.35
USP39-208ENST00000455732 TNFP01375 233 aa17.26■□□□□ 0.35
USP39-208ENST00000455732 JUPP14923 745 aa17.26■□□□□ 0.35
USP39-208ENST00000455732 HLA-DPA1P20036 260 aa17.26■□□□□ 0.35
USP39-208ENST00000455732 TNNT3P45378 269 aaPredicted RBP17.26■□□□□ 0.35
USP39-208ENST00000455732 DCDC1P59894 354 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms