RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 PCDHB3Q9Y5E6 796 aa23.13■■□□□ 1.29
PTPRA-208ENST00000455631 RPS6KL1Q9Y6S9 549 aa23.13■■□□□ 1.29
PTPRA-208ENST00000455631 MAP3K6O95382 1288 aa23.12■■□□□ 1.29
PTPRA-208ENST00000455631 AIF1P55008 147 aa23.12■■□□□ 1.29
PTPRA-208ENST00000455631 GSCP56915 257 aaPredicted RBP23.12■■□□□ 1.29
PTPRA-208ENST00000455631 NSUN2Q08J23 767 aaKnown RBP eCLIP23.12■■□□□ 1.29
PTPRA-208ENST00000455631 WDR74Q6RFH5 385 aaPredicted RBP23.12■■□□□ 1.29
PTPRA-208ENST00000455631 TRIM72Q6ZMU5 477 aa23.12■■□□□ 1.29
PTPRA-208ENST00000455631 EFCAB3Q8N7B9 438 aa23.12■■□□□ 1.29
PTPRA-208ENST00000455631 C3orf20Q8ND61 904 aa23.12■■□□□ 1.29
PTPRA-208ENST00000455631 NSMCE3Q96MG7 304 aa23.12■■□□□ 1.29
PTPRA-208ENST00000455631 KIAA1468Q9P260 1216 aa23.12■■□□□ 1.29
PTPRA-208ENST00000455631 UNC79Q9P2D8 2635 aa23.12■■□□□ 1.29
PTPRA-208ENST00000455631 KLHL3Q9UH77 587 aa23.12■■□□□ 1.29
PTPRA-208ENST00000455631 DFFAO00273 331 aa23.11■■□□□ 1.29
PTPRA-208ENST00000455631 POLR1CO15160 346 aaPredicted RBP23.11■■□□□ 1.29
PTPRA-208ENST00000455631 CPP00450 1065 aa23.11■■□□□ 1.29
PTPRA-208ENST00000455631 MAPK9P45984 424 aa23.11■■□□□ 1.29
PTPRA-208ENST00000455631 ZNF143P52747 638 aaPredicted RBP23.11■■□□□ 1.29
PTPRA-208ENST00000455631 CAPRIN2Q6IMN6 1127 aaKnown RBP23.11■■□□□ 1.29
PTPRA-208ENST00000455631 ARHGAP36Q6ZRI8 547 aa23.11■■□□□ 1.29
PTPRA-208ENST00000455631 MARK2Q7KZI7 788 aaKnown RBP23.11■■□□□ 1.29
PTPRA-208ENST00000455631 SFRP1Q8N474 314 aa23.11■■□□□ 1.29
PTPRA-208ENST00000455631 FNIP1Q8TF40 1166 aa23.11■■□□□ 1.29
PTPRA-208ENST00000455631 SSC4DQ8WTU2 575 aa23.11■■□□□ 1.29
PTPRA-208ENST00000455631 NCSTNQ92542 709 aa23.11■■□□□ 1.29
PTPRA-208ENST00000455631 RNF31Q96EP0 1072 aa23.11■■□□□ 1.29
PTPRA-208ENST00000455631 GPATCH2LQ9NWQ4 482 aa23.11■■□□□ 1.29
PTPRA-208ENST00000455631 TMEM98Q9Y2Y6 226 aa23.11■■□□□ 1.29
PTPRA-208ENST00000455631 TTC24A2A3L6 582 aaPredicted RBP23.1■■□□□ 1.29
PTPRA-208ENST00000455631 ANKRD62A6NC57 917 aa23.1■■□□□ 1.29
PTPRA-208ENST00000455631 UNGP13051 313 aaPredicted RBP23.1■■□□□ 1.29
PTPRA-208ENST00000455631 LHCGRP22888 699 aa23.1■■□□□ 1.29
PTPRA-208ENST00000455631 F8A1P23610 371 aa23.1■■□□□ 1.29
PTPRA-208ENST00000455631 TEAD1P28347 426 aa23.1■■□□□ 1.29
PTPRA-208ENST00000455631 HTR7P34969 479 aa23.1■■□□□ 1.29
PTPRA-208ENST00000455631 DLSTP36957 453 aa23.1■■□□□ 1.29
PTPRA-208ENST00000455631 GPR1P46091 355 aa23.1■■□□□ 1.29
PTPRA-208ENST00000455631 HHEXQ03014 270 aa23.1■■□□□ 1.29
PTPRA-208ENST00000455631 NFATC2Q13469 925 aa23.1■■□□□ 1.29
PTPRA-208ENST00000455631 ERV3-1Q14264 604 aa23.1■■□□□ 1.29
PTPRA-208ENST00000455631 RFTN1Q14699 578 aaPredicted RBP23.1■■□□□ 1.29
PTPRA-208ENST00000455631 Q6ZVL8 140 aa23.1■■□□□ 1.29
PTPRA-208ENST00000455631 MCEEQ96PE7 176 aa23.1■■□□□ 1.29
PTPRA-208ENST00000455631 PCDHGC4Q9Y5F7 938 aa23.1■■□□□ 1.29
PTPRA-208ENST00000455631 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.09■■□□□ 1.29
PTPRA-208ENST00000455631 SIGLEC16A6NMB1 481 aa23.09■■□□□ 1.29
PTPRA-208ENST00000455631 TTLL8A6PVC2 850 aa23.09■■□□□ 1.29
PTPRA-208ENST00000455631 EEF2KO00418 725 aaKnown RBP23.09■■□□□ 1.29
PTPRA-208ENST00000455631 GADD45BO75293 160 aaPredicted RBP23.09■■□□□ 1.29
PTPRA-208ENST00000455631 RFPL1O75677 317 aa23.09■■□□□ 1.29
PTPRA-208ENST00000455631 CALB1P05937 261 aa23.09■■□□□ 1.29
PTPRA-208ENST00000455631 CYP2A6P11509 494 aaPredicted RBP23.09■■□□□ 1.29
PTPRA-208ENST00000455631 NFKBIAP25963 317 aa23.09■■□□□ 1.29
PTPRA-208ENST00000455631 MAP7Q14244 749 aa23.09■■□□□ 1.29
PTPRA-208ENST00000455631 CAMK4Q16566 473 aa23.09■■□□□ 1.29
PTPRA-208ENST00000455631 CHCHD2P9Q5T1J5 151 aaPredicted RBP23.09■■□□□ 1.29
PTPRA-208ENST00000455631 DNAJC24Q6P3W2 148 aa23.09■■□□□ 1.29
PTPRA-208ENST00000455631 TRIM74Q86UV6 250 aa23.09■■□□□ 1.29
PTPRA-208ENST00000455631 SCARF2Q96GP6 870 aaPredicted RBP23.09■■□□□ 1.29
PTPRA-208ENST00000455631 PCDHB18PQ96TA0 734 aa23.09■■□□□ 1.29
PTPRA-208ENST00000455631 ULBP3Q9BZM4 244 aa23.09■■□□□ 1.29
PTPRA-208ENST00000455631 STN1Q9H668 368 aaKnown RBP23.09■■□□□ 1.29
PTPRA-208ENST00000455631 DACH1Q9UI36 760 aa23.09■■□□□ 1.29
PTPRA-208ENST00000455631 CROTQ9UKG9 612 aa23.09■■□□□ 1.29
PTPRA-208ENST00000455631 POLHQ9Y253 713 aa23.09■■□□□ 1.29
PTPRA-208ENST00000455631 A0A1W2PQ67 120 aa23.08■■□□□ 1.29
PTPRA-208ENST00000455631 NPIPB15A6NHN6 443 aaPredicted RBP23.08■■□□□ 1.29
PTPRA-208ENST00000455631 EML2O95834 649 aa23.08■■□□□ 1.29
PTPRA-208ENST00000455631 RENBPP51606 427 aa23.08■■□□□ 1.29
PTPRA-208ENST00000455631 IL10RBQ08334 325 aa23.08■■□□□ 1.29
PTPRA-208ENST00000455631 PYCR3Q53H96 274 aa23.08■■□□□ 1.29
PTPRA-208ENST00000455631 GALNT13Q8IUC8 556 aa23.08■■□□□ 1.29
PTPRA-208ENST00000455631 ARHGAP12Q8IWW6 846 aa23.08■■□□□ 1.29
PTPRA-208ENST00000455631 MLKLQ8NB16 471 aa23.08■■□□□ 1.29
PTPRA-208ENST00000455631 GALNT11Q8NCW6 608 aa23.08■■□□□ 1.29
PTPRA-208ENST00000455631 SPOCK2Q92563 424 aa23.08■■□□□ 1.29
PTPRA-208ENST00000455631 PSKH2Q96QS6 385 aa23.08■■□□□ 1.29
PTPRA-208ENST00000455631 VPS16Q9H269 839 aa23.08■■□□□ 1.29
PTPRA-208ENST00000455631 CD84Q9UIB8 345 aa23.08■■□□□ 1.29
PTPRA-208ENST00000455631 TLK1Q9UKI8 766 aa23.08■■□□□ 1.29
PTPRA-208ENST00000455631 AP4E1Q9UPM8 1137 aa23.08■■□□□ 1.29
PTPRA-208ENST00000455631 CREBBPQ92793 2442 aa23.08■■□□□ 1.28
PTPRA-208ENST00000455631 A1L4Q6 167 aa23.07■■□□□ 1.28
PTPRA-208ENST00000455631 PSMD11O00231 422 aa23.07■■□□□ 1.28
PTPRA-208ENST00000455631 DAPK3O43293 454 aa23.07■■□□□ 1.28
PTPRA-208ENST00000455631 HTRA2O43464 458 aaPredicted RBP23.07■■□□□ 1.28
PTPRA-208ENST00000455631 SOCS5O75159 536 aa23.07■■□□□ 1.28
PTPRA-208ENST00000455631 FURINP09958 794 aa23.07■■□□□ 1.28
PTPRA-208ENST00000455631 SOX5P35711 763 aa23.07■■□□□ 1.28
PTPRA-208ENST00000455631 RPL7AP62424 266 aaKnown RBP23.07■■□□□ 1.28
PTPRA-208ENST00000455631 FOXM1Q08050 763 aa23.07■■□□□ 1.28
PTPRA-208ENST00000455631 LRP8Q14114 963 aa23.07■■□□□ 1.28
PTPRA-208ENST00000455631 LBRQ14739 615 aaKnown RBP23.07■■□□□ 1.28
PTPRA-208ENST00000455631 TSPAN33Q86UF1 283 aa23.07■■□□□ 1.28
PTPRA-208ENST00000455631 PHF13Q86YI8 300 aaPredicted RBP23.07■■□□□ 1.28
PTPRA-208ENST00000455631 NPWQ8N729 165 aa23.07■■□□□ 1.28
PTPRA-208ENST00000455631 CPT1CQ8TCG5 803 aa23.07■■□□□ 1.28
PTPRA-208ENST00000455631 CNPY3Q9BT09 278 aa23.07■■□□□ 1.28
PTPRA-208ENST00000455631 GANQ9H2C0 597 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms