RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 THAP2Q9H0W7 228 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 IKZF4Q9H2S9 585 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 GOLPH3LQ9H4A5 285 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 C8orf33Q9H7E9 229 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 USP29Q9HBJ7 922 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 SLC39A2Q9NP94 309 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 AGPAT5Q9NUQ2 364 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 P4HTMQ9NXG6 502 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 SPG21Q9NZD8 308 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 DNMT3BQ9UBC3 853 aaKnown RBP4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 PEMTQ9UBM1 199 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 STK39Q9UEW8 545 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 MAGEL2Q9UJ55 1249 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 RAB21Q9UL25 225 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 TRPC5Q9UL62 973 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 PMF1-BGLAPU3KQ54 211 aa4.46□□□□□ -1.7
HMGB3P21-201ENST00000452483 A0A087WV48 116 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 A0A0A6YYC8 382 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 TCRBV5S2A0A599 114 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 MFSD2BA6NFX1 497 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 MBD3L5A6NJ08 208 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 E9PI62 339 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 F8WDY8 70 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 I3L1I5 382 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 M0QYT0 321 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 SLC30A4O14863 429 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 ST8SIA3O43173 380 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 TRIM13O60858 407 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 SLC43A1O75387 559 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 TACC1O75410 805 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 NDUFS3O75489 264 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 ZNF821O75541 412 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 RHOBTB1O94844 696 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 OR6B1O95007 311 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 PRSS23O95084 383 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 CELF2O95319 508 aaKnown RBP4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 BCL10O95999 233 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 FGBP02675 491 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 PLA2G1BP04054 148 aaKnown RBP4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 INHBBP09529 407 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 RAP2AP10114 183 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 EPB41P11171 864 aaKnown RBP4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 KRT3P12035 628 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 VCLP18206 1134 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 ADRA2CP18825 462 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 PRKACBP22694 351 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 CTNNA2P26232 953 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 PON1P27169 355 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 PTPN4P29074 926 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 HOXA13P31271 388 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 CSF2RBP32927 897 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 IL13P35225 146 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 GSTM5P46439 218 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 GABRB2P47870 512 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 ALDH1A3P47895 512 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 CLCNKBP51801 687 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 ATP5IP56385 69 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 FAM3BP58499 235 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 EIF3EP60228 445 aaKnown RBP4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 ACTR3P61158 418 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 RBM6P78332 1123 aaKnown RBP4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 GALK2Q01415 458 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 CAP1Q01518 475 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 HSPA14Q0VDF9 509 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 ARHGAP19Q14CB8 494 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 SNAPC1Q16533 368 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 PRAMEF20Q5VT98 475 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 FAM160B1Q5W0V3 765 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 KANK2Q63ZY3 851 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 AAGABQ6PD74 315 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 CES3Q6UWW8 571 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 TRIM72Q6ZMU5 477 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 WDR88Q6ZMY6 472 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 C11orf57Q6ZUT1 292 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 PRRT2Q7Z6L0 340 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 TMCO2Q7Z6W1 182 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 B3GNT8Q7Z7M8 397 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 ZNF410Q86VK4 478 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 COMTD1Q86VU5 262 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 PDSS2Q86YH6 399 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 SERPINA12Q8IW75 414 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 CCDC83Q8IWF9 413 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 TIGD4Q8IY51 512 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 ABRAQ8N0Z2 381 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 GUF1Q8N442 669 aaKnown RBP4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 SIRT6Q8N6T7 355 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 OR2T34Q8NGX1 318 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 HUS1BQ8NHY5 278 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 MBD3L2Q8NHZ7 208 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 BPIFB1Q8TDL5 484 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 LRRC8CQ8TDW0 803 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 PTPMT1Q8WUK0 201 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 CPA5Q8WXQ8 436 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 SEC14L1Q92503 715 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 LPGAT1Q92604 370 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 MMABQ96EY8 250 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 C14orf79Q96F83 325 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 ZNF668Q96K58 619 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 HIST1H2AAQ96QV6 131 aa4.45□□□□□ -1.7
HMGB3P21-201ENST00000452483 SECISBP2Q96T21 854 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms