RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 RDH14Q9HBH5 336 aa27.05■■□□□ 1.92
USP42-204ENST00000451154 SLC17A4Q9Y2C5 497 aa27.05■■□□□ 1.92
USP42-204ENST00000451154 TMEM98Q9Y2Y6 226 aa27.05■■□□□ 1.92
USP42-204ENST00000451154 LUC7L2Q9Y383 392 aaKnown RBP27.05■■□□□ 1.92
USP42-204ENST00000451154 PLEKHM1Q9Y4G2 1056 aa27.05■■□□□ 1.92
USP42-204ENST00000451154 NVLO15381 856 aaKnown RBP27.04■■□□□ 1.92
USP42-204ENST00000451154 FZD6O60353 706 aa27.04■■□□□ 1.92
USP42-204ENST00000451154 TEAD1P28347 426 aa27.04■■□□□ 1.92
USP42-204ENST00000451154 ADCY8P40145 1251 aa27.04■■□□□ 1.92
USP42-204ENST00000451154 ETV5P41161 510 aa27.04■■□□□ 1.92
USP42-204ENST00000451154 GARSP41250 739 aaKnown RBP27.04■■□□□ 1.92
USP42-204ENST00000451154 PTSQ03393 145 aa27.04■■□□□ 1.92
USP42-204ENST00000451154 DPTQ07507 201 aa27.04■■□□□ 1.92
USP42-204ENST00000451154 GALNT2Q10471 571 aa27.04■■□□□ 1.92
USP42-204ENST00000451154 DPYSL3Q14195 570 aa27.04■■□□□ 1.92
USP42-204ENST00000451154 LRRC66Q68CR7 880 aa27.04■■□□□ 1.92
USP42-204ENST00000451154 NCBP2-AS2Q69YL0 99 aa27.04■■□□□ 1.92
USP42-204ENST00000451154 NDUFAF2Q8N183 169 aa27.04■■□□□ 1.92
USP42-204ENST00000451154 KCTD6Q8NC69 237 aa27.04■■□□□ 1.92
USP42-204ENST00000451154 PATE1Q8WXA2 126 aa27.04■■□□□ 1.92
USP42-204ENST00000451154 SCAMP4Q969E2 229 aa27.04■■□□□ 1.92
USP42-204ENST00000451154 SOD1P00441 154 aa27.03■■□□□ 1.92
USP42-204ENST00000451154 IVLP07476 585 aa27.03■■□□□ 1.92
USP42-204ENST00000451154 KRT10P13645 584 aa27.03■■□□□ 1.92
USP42-204ENST00000451154 DSC2Q02487 901 aa27.03■■□□□ 1.92
USP42-204ENST00000451154 SRSF6Q13247 344 aaKnown RBP27.03■■□□□ 1.92
USP42-204ENST00000451154 PAFAH1B3Q15102 231 aaKnown RBP27.03■■□□□ 1.92
USP42-204ENST00000451154 PIM3Q86V86 326 aa27.03■■□□□ 1.92
USP42-204ENST00000451154 ZNF564Q8TBZ8 553 aaPredicted RBP27.03■■□□□ 1.92
USP42-204ENST00000451154 AP2M1Q96CW1 435 aa27.03■■□□□ 1.92
USP42-204ENST00000451154 CMKLR1Q99788 373 aa27.03■■□□□ 1.92
USP42-204ENST00000451154 POLR1EQ9GZS1 481 aaKnown RBP27.03■■□□□ 1.92
USP42-204ENST00000451154 RBM22Q9NW64 420 aaKnown RBP eCLIP27.03■■□□□ 1.92
USP42-204ENST00000451154 CHKBQ9Y259 395 aa27.03■■□□□ 1.92
USP42-204ENST00000451154 PRAMEF33A0A0G2JMD5 474 aa27.02■■□□□ 1.92
USP42-204ENST00000451154 MATN3O15232 486 aa27.02■■□□□ 1.92
USP42-204ENST00000451154 PRAMEF10O60809 474 aa27.02■■□□□ 1.92
USP42-204ENST00000451154 PLA2G2AP14555 144 aa27.02■■□□□ 1.92
USP42-204ENST00000451154 MAPK10P53779 464 aa27.02■■□□□ 1.92
USP42-204ENST00000451154 EPHB1P54762 984 aa27.02■■□□□ 1.92
USP42-204ENST00000451154 MAP9Q49MG5 647 aa27.02■■□□□ 1.92
USP42-204ENST00000451154 ANKRD20A8PQ5CZ79 823 aa27.02■■□□□ 1.92
USP42-204ENST00000451154 ZNF438Q7Z4V0 828 aa27.02■■□□□ 1.92
USP42-204ENST00000451154 TRIM74Q86UV6 250 aa27.02■■□□□ 1.92
USP42-204ENST00000451154 MAML1Q92585 1016 aa27.02■■□□□ 1.92
USP42-204ENST00000451154 USP7Q93009 1102 aa27.02■■□□□ 1.92
USP42-204ENST00000451154 TMEM159Q96B96 161 aa27.02■■□□□ 1.92
USP42-204ENST00000451154 ACSL6Q9UKU0 697 aa27.02■■□□□ 1.92
USP42-204ENST00000451154 TTLL3Q9Y4R7 772 aa27.02■■□□□ 1.92
USP42-204ENST00000451154 A0A0J9YYE9 177 aa27.01■■□□□ 1.91
USP42-204ENST00000451154 CPNE6O95741 557 aa27.01■■□□□ 1.91
USP42-204ENST00000451154 TRBC1P01850 177 aa27.01■■□□□ 1.91
USP42-204ENST00000451154 GYPCP04921 128 aa27.01■■□□□ 1.91
USP42-204ENST00000451154 C16orf72Q14CZ0 275 aa27.01■■□□□ 1.91
USP42-204ENST00000451154 ADAMTSL4Q6UY14 1074 aa27.01■■□□□ 1.91
USP42-204ENST00000451154 ZNF574Q6ZN55 896 aaPredicted RBP27.01■■□□□ 1.91
USP42-204ENST00000451154 ZFAND4Q86XD8 727 aa27.01■■□□□ 1.91
USP42-204ENST00000451154 NAGSQ8N159 534 aa27.01■■□□□ 1.91
USP42-204ENST00000451154 AGAP2Q99490 1192 aa27.01■■□□□ 1.91
USP42-204ENST00000451154 NUDT22Q9BRQ3 303 aa27.01■■□□□ 1.91
USP42-204ENST00000451154 IFNKQ9P0W0 207 aa27.01■■□□□ 1.91
USP42-204ENST00000451154 CTTNBP2NLQ9P2B4 639 aa27.01■■□□□ 1.91
USP42-204ENST00000451154 CCNCP24863 283 aa27■■□□□ 1.91
USP42-204ENST00000451154 CD1CP29017 333 aa27■■□□□ 1.91
USP42-204ENST00000451154 TAS2R40P59535 323 aa27■■□□□ 1.91
USP42-204ENST00000451154 NIPAL4Q0D2K0 466 aa27■■□□□ 1.91
USP42-204ENST00000451154 BIRC2Q13490 618 aa27■■□□□ 1.91
USP42-204ENST00000451154 IFI16Q16666 785 aaKnown RBP27■■□□□ 1.91
USP42-204ENST00000451154 TIGD7Q6NT04 549 aaPredicted RBP27■■□□□ 1.91
USP42-204ENST00000451154 MARK2Q7KZI7 788 aaKnown RBP27■■□□□ 1.91
USP42-204ENST00000451154 SCARF2Q96GP6 870 aaPredicted RBP27■■□□□ 1.91
USP42-204ENST00000451154 FOXJ2Q9P0K8 574 aa27■■□□□ 1.91
USP42-204ENST00000451154 NENFQ9UMX5 172 aa27■■□□□ 1.91
USP42-204ENST00000451154 ZFC3H1O60293 1989 aaKnown RBP26.99■■□□□ 1.91
USP42-204ENST00000451154 CAPN8A6NHC0 703 aa26.99■■□□□ 1.91
USP42-204ENST00000451154 C9orf172C9J069 976 aa26.99■■□□□ 1.91
USP42-204ENST00000451154 PPM1DO15297 605 aa26.99■■□□□ 1.91
USP42-204ENST00000451154 PROSCO94903 275 aa26.99■■□□□ 1.91
USP42-204ENST00000451154 PRLP01236 227 aa26.99■■□□□ 1.91
USP42-204ENST00000451154 CES1P23141 567 aa26.99■■□□□ 1.91
USP42-204ENST00000451154 CASP14P31944 242 aa26.99■■□□□ 1.91
USP42-204ENST00000451154 ACTR1BP42025 376 aa26.99■■□□□ 1.91
USP42-204ENST00000451154 ACTR1AP61163 376 aa26.99■■□□□ 1.91
USP42-204ENST00000451154 PDK2Q15119 407 aa26.99■■□□□ 1.91
USP42-204ENST00000451154 NKAIN2Q5VXU1 208 aa26.99■■□□□ 1.91
USP42-204ENST00000451154 RCBTB1Q8NDN9 531 aa26.99■■□□□ 1.91
USP42-204ENST00000451154 ARRDC2Q8TBH0 407 aa26.99■■□□□ 1.91
USP42-204ENST00000451154 IQCDQ96DY2 449 aa26.99■■□□□ 1.91
USP42-204ENST00000451154 TSGA13Q96PP4 275 aa26.99■■□□□ 1.91
USP42-204ENST00000451154 RIOK2Q9BVS4 552 aaKnown RBP26.99■■□□□ 1.91
USP42-204ENST00000451154 SETXQ7Z333 2677 aaKnown RBP26.98■■□□□ 1.91
USP42-204ENST00000451154 FLNBO75369 2602 aaKnown RBP26.98■■□□□ 1.91
USP42-204ENST00000451154 TRBV23OR9-2A0A075B6M9 112 aa26.98■■□□□ 1.91
USP42-204ENST00000451154 GOLGA6L19H0YKK7 550 aa26.98■■□□□ 1.91
USP42-204ENST00000451154 INPP4BO15327 924 aa26.98■■□□□ 1.91
USP42-204ENST00000451154 CLDN7O95471 211 aa26.98■■□□□ 1.91
USP42-204ENST00000451154 LIPCP11150 499 aa26.98■■□□□ 1.91
USP42-204ENST00000451154 CCL4P13236 92 aa26.98■■□□□ 1.91
USP42-204ENST00000451154 ZNF30P17039 623 aa26.98■■□□□ 1.91
USP42-204ENST00000451154 STC1P52823 247 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms