RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 CENPUQ71F23 418 aa13□□□□□ -0.33
VPS33A-202ENST00000451053 CAND1Q86VP6 1230 aaKnown RBP13□□□□□ -0.33
VPS33A-202ENST00000451053 PLA2G15Q8NCC3 412 aa13□□□□□ -0.33
VPS33A-202ENST00000451053 GPR26Q8NDV2 337 aa13□□□□□ -0.33
VPS33A-202ENST00000451053 DENND6BQ8NEG7 585 aa13□□□□□ -0.33
VPS33A-202ENST00000451053 BRSK1Q8TDC3 778 aa13□□□□□ -0.33
VPS33A-202ENST00000451053 AENQ8WTP8 325 aaKnown RBP13□□□□□ -0.33
VPS33A-202ENST00000451053 SCAMP4Q969E2 229 aa13□□□□□ -0.33
VPS33A-202ENST00000451053 CAVIN3Q969G5 261 aa13□□□□□ -0.33
VPS33A-202ENST00000451053 C1QTNF7Q9BXJ2 289 aa13□□□□□ -0.33
VPS33A-202ENST00000451053 ABCG8Q9H221 673 aa13□□□□□ -0.33
VPS33A-202ENST00000451053 SMOC1Q9H4F8 434 aa13□□□□□ -0.33
VPS33A-202ENST00000451053 ARFGAP3Q9NP61 516 aa13□□□□□ -0.33
VPS33A-202ENST00000451053 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13□□□□□ -0.33
VPS33A-202ENST00000451053 PKD2L2Q9NZM6 624 aa13□□□□□ -0.33
VPS33A-202ENST00000451053 IL17CQ9P0M4 197 aa13□□□□□ -0.33
VPS33A-202ENST00000451053 CACNA1HO95180 2353 aa12.99□□□□□ -0.33
VPS33A-202ENST00000451053 A0A1W2PR77 199 aa12.99□□□□□ -0.33
VPS33A-202ENST00000451053 CCDC78A2IDD5 438 aa12.99□□□□□ -0.33
VPS33A-202ENST00000451053 POM121BA6NF01 834 aa12.99□□□□□ -0.33
VPS33A-202ENST00000451053 C2orf81A6NN90 581 aa12.99□□□□□ -0.33
VPS33A-202ENST00000451053 PATE3B3GLJ2 98 aa12.99□□□□□ -0.33
VPS33A-202ENST00000451053 PROB1E7EW31 1015 aa12.99□□□□□ -0.33
VPS33A-202ENST00000451053 K7ESM1 405 aa12.99□□□□□ -0.33
VPS33A-202ENST00000451053 TP73O15350 636 aa12.99□□□□□ -0.33
VPS33A-202ENST00000451053 BCAT2O15382 392 aaPredicted RBP12.99□□□□□ -0.33
VPS33A-202ENST00000451053 LDB2O43679 373 aa12.99□□□□□ -0.33
VPS33A-202ENST00000451053 CRTAMO95727 393 aa12.99□□□□□ -0.33
VPS33A-202ENST00000451053 RETP07949 1114 aa12.99□□□□□ -0.33
VPS33A-202ENST00000451053 MYBL2P10244 700 aa12.99□□□□□ -0.33
VPS33A-202ENST00000451053 LPOP22079 712 aaPredicted RBP12.99□□□□□ -0.33
VPS33A-202ENST00000451053 MGAT1P26572 445 aa12.99□□□□□ -0.33
VPS33A-202ENST00000451053 HMGCLP35914 325 aa12.99□□□□□ -0.33
VPS33A-202ENST00000451053 CSNK1EP49674 416 aaKnown RBP12.99□□□□□ -0.33
VPS33A-202ENST00000451053 ZNF140P52738 457 aaPredicted RBP12.99□□□□□ -0.33
VPS33A-202ENST00000451053 RACK1P63244 317 aaKnown RBP12.99□□□□□ -0.33
VPS33A-202ENST00000451053 CRADDP78560 199 aa12.99□□□□□ -0.33
VPS33A-202ENST00000451053 STAT4Q14765 748 aa12.99□□□□□ -0.33
VPS33A-202ENST00000451053 DNAJC21Q5F1R6 531 aaKnown RBP12.99□□□□□ -0.33
VPS33A-202ENST00000451053 ALS2CLQ60I27 953 aa12.99□□□□□ -0.33
VPS33A-202ENST00000451053 MICALCLQ6ZW33 695 aa12.99□□□□□ -0.33
VPS33A-202ENST00000451053 ZNF765Q7L2R6 523 aa12.99□□□□□ -0.33
VPS33A-202ENST00000451053 GSPT2Q8IYD1 628 aaKnown RBP12.99□□□□□ -0.33
VPS33A-202ENST00000451053 NRSN1Q8IZ57 195 aa12.99□□□□□ -0.33
VPS33A-202ENST00000451053 OR13C4Q8NGS5 318 aa12.99□□□□□ -0.33
VPS33A-202ENST00000451053 BMFQ96LC9 184 aa12.99□□□□□ -0.33
VPS33A-202ENST00000451053 SERPINB12Q96P63 405 aa12.99□□□□□ -0.33
VPS33A-202ENST00000451053 AGAP2Q99490 1192 aa12.99□□□□□ -0.33
VPS33A-202ENST00000451053 RIOK2Q9BVS4 552 aaKnown RBP12.99□□□□□ -0.33
VPS33A-202ENST00000451053 SYBUQ9NX95 663 aa12.99□□□□□ -0.33
VPS33A-202ENST00000451053 SUSD2Q9UGT4 822 aa12.99□□□□□ -0.33
VPS33A-202ENST00000451053 GMEB2Q9UKD1 530 aa12.99□□□□□ -0.33
VPS33A-202ENST00000451053 PCDHGA5Q9Y5G8 931 aa12.99□□□□□ -0.33
VPS33A-202ENST00000451053 MUC6Q6W4X9 2439 aa12.99□□□□□ -0.33
VPS33A-202ENST00000451053 A0A1B0GTW7 788 aa12.98□□□□□ -0.33
VPS33A-202ENST00000451053 CCL22O00626 93 aa12.98□□□□□ -0.33
VPS33A-202ENST00000451053 FPGTO14772 594 aa12.98□□□□□ -0.33
VPS33A-202ENST00000451053 STX7O15400 261 aaKnown RBP12.98□□□□□ -0.33
VPS33A-202ENST00000451053 SOD1P00441 154 aa12.98□□□□□ -0.33
VPS33A-202ENST00000451053 GNSP15586 552 aa12.98□□□□□ -0.33
VPS33A-202ENST00000451053 CD38P28907 300 aa12.98□□□□□ -0.33
VPS33A-202ENST00000451053 HOXD12P35452 270 aa12.98□□□□□ -0.33
VPS33A-202ENST00000451053 DPP6P42658 865 aa12.98□□□□□ -0.33
VPS33A-202ENST00000451053 MAGEA3P43357 314 aa12.98□□□□□ -0.33
VPS33A-202ENST00000451053 NPY2RP49146 381 aa12.98□□□□□ -0.33
VPS33A-202ENST00000451053 CBLBQ13191 982 aa12.98□□□□□ -0.33
VPS33A-202ENST00000451053 INPP5AQ14642 412 aa12.98□□□□□ -0.33
VPS33A-202ENST00000451053 PLA2G2CQ5R387 149 aa12.98□□□□□ -0.33
VPS33A-202ENST00000451053 ARMC3Q5W041 872 aa12.98□□□□□ -0.33
VPS33A-202ENST00000451053 ESRP1Q6NXG1 681 aaKnown RBP12.98□□□□□ -0.33
VPS33A-202ENST00000451053 PNCKQ6P2M8 343 aa12.98□□□□□ -0.33
VPS33A-202ENST00000451053 KYAT3Q6YP21 454 aaKnown RBP12.98□□□□□ -0.33
VPS33A-202ENST00000451053 PTAR1Q7Z6K3 402 aaPredicted RBP12.98□□□□□ -0.33
VPS33A-202ENST00000451053 ABI3BPQ7Z7G0 1075 aa12.98□□□□□ -0.33
VPS33A-202ENST00000451053 CCDC25Q86WR0 208 aa12.98□□□□□ -0.33
VPS33A-202ENST00000451053 RAVER1Q8IY67 606 aaKnown RBP12.98□□□□□ -0.33
VPS33A-202ENST00000451053 MPP5Q8N3R9 675 aa12.98□□□□□ -0.33
VPS33A-202ENST00000451053 OR13H1Q8NG92 308 aa12.98□□□□□ -0.33
VPS33A-202ENST00000451053 OR4K2Q8NGD2 314 aa12.98□□□□□ -0.33
VPS33A-202ENST00000451053 ANKRD7Q92527 254 aa12.98□□□□□ -0.33
VPS33A-202ENST00000451053 AP2M1Q96CW1 435 aa12.98□□□□□ -0.33
VPS33A-202ENST00000451053 LRRC39Q96DD0 335 aa12.98□□□□□ -0.33
VPS33A-202ENST00000451053 DNAJC1Q96KC8 554 aaKnown RBP12.98□□□□□ -0.33
VPS33A-202ENST00000451053 PWWP2AQ96N64 755 aa12.98□□□□□ -0.33
VPS33A-202ENST00000451053 RANBP9Q96S59 729 aa12.98□□□□□ -0.33
VPS33A-202ENST00000451053 FAM83DQ9H4H8 585 aa12.98□□□□□ -0.33
VPS33A-202ENST00000451053 FSCN3Q9NQT6 498 aa12.98□□□□□ -0.33
VPS33A-202ENST00000451053 KCTD5Q9NXV2 234 aa12.98□□□□□ -0.33
VPS33A-202ENST00000451053 BFARQ9NZS9 450 aa12.98□□□□□ -0.33
VPS33A-202ENST00000451053 FNDC3AQ9Y2H6 1198 aaKnown RBP12.98□□□□□ -0.33
VPS33A-202ENST00000451053 PKP3Q9Y446 797 aa12.98□□□□□ -0.33
VPS33A-202ENST00000451053 TCAF1Q9Y4C2 921 aa12.98□□□□□ -0.33
VPS33A-202ENST00000451053 HS3ST3A1Q9Y663 406 aa12.98□□□□□ -0.33
VPS33A-202ENST00000451053 A0A1B0GVT2 93 aa12.97□□□□□ -0.33
VPS33A-202ENST00000451053 HEATR9A2RTY3 570 aa12.97□□□□□ -0.33
VPS33A-202ENST00000451053 RGSL1A5PLK6 1076 aa12.97□□□□□ -0.33
VPS33A-202ENST00000451053 MROH6A6NGR9 719 aa12.97□□□□□ -0.33
VPS33A-202ENST00000451053 A6NNZ2 444 aa12.97□□□□□ -0.33
VPS33A-202ENST00000451053 PRR5-ARHGAP8B1AHC4 643 aa12.97□□□□□ -0.33
VPS33A-202ENST00000451053 BANF1O75531 89 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms