RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 NPNTQ6UXI9 565 aa15.22■□□□□ 0.03
CHD3-205ENST00000449744 ADAMTSL4Q6UY14 1074 aa15.22■□□□□ 0.03
CHD3-205ENST00000449744 RFLNAQ6ZTI6 216 aa15.22■□□□□ 0.03
CHD3-205ENST00000449744 BZW1Q7L1Q6 419 aaKnown RBP15.22■□□□□ 0.03
CHD3-205ENST00000449744 NLRP8Q86W28 1048 aa15.22■□□□□ 0.03
CHD3-205ENST00000449744 NRSN1Q8IZ57 195 aa15.22■□□□□ 0.03
CHD3-205ENST00000449744 Q8N9G6 341 aaPredicted RBP15.22■□□□□ 0.03
CHD3-205ENST00000449744 TC2NQ8N9U0 490 aa15.22■□□□□ 0.03
CHD3-205ENST00000449744 WDR36Q8NI36 951 aaKnown RBP15.22■□□□□ 0.03
CHD3-205ENST00000449744 CCHCR1Q8TD31 782 aa15.22■□□□□ 0.03
CHD3-205ENST00000449744 GPBAR1Q8TDU6 330 aa15.22■□□□□ 0.03
CHD3-205ENST00000449744 SCAMP4Q969E2 229 aa15.22■□□□□ 0.03
CHD3-205ENST00000449744 MLPHQ9BV36 600 aaPredicted RBP15.22■□□□□ 0.03
CHD3-205ENST00000449744 BRD8Q9H0E9 1235 aa15.22■□□□□ 0.03
CHD3-205ENST00000449744 LRRN3Q9H3W5 708 aa15.22■□□□□ 0.03
CHD3-205ENST00000449744 LUC7LQ9NQ29 371 aaKnown RBP15.22■□□□□ 0.03
CHD3-205ENST00000449744 LRIT1Q9P2V4 623 aa15.22■□□□□ 0.03
CHD3-205ENST00000449744 RABGEF1Q9UJ41 708 aa15.22■□□□□ 0.03
CHD3-205ENST00000449744 SLC17A4Q9Y2C5 497 aa15.22■□□□□ 0.03
CHD3-205ENST00000449744 RP1P56715 2156 aa15.22■□□□□ 0.03
CHD3-205ENST00000449744 DSPP15924 2871 aaKnown RBP15.22■□□□□ 0.03
CHD3-205ENST00000449744 CCDC187A0A096LP49 1063 aa15.21■□□□□ 0.03
CHD3-205ENST00000449744 C1orf232A0A0U1RR37 186 aa15.21■□□□□ 0.03
CHD3-205ENST00000449744 ANKRD66B4E2M5 251 aa15.21■□□□□ 0.03
CHD3-205ENST00000449744 TMX2-CTNND1H3BSU7 103 aa15.21■□□□□ 0.03
CHD3-205ENST00000449744 CASC3O15234 703 aaKnown RBP15.21■□□□□ 0.03
CHD3-205ENST00000449744 IVLP07476 585 aa15.21■□□□□ 0.03
CHD3-205ENST00000449744 PNLIPP16233 465 aa15.21■□□□□ 0.03
CHD3-205ENST00000449744 CYLC1P35663 651 aaPredicted RBP15.21■□□□□ 0.03
CHD3-205ENST00000449744 POLD2P49005 469 aa15.21■□□□□ 0.03
CHD3-205ENST00000449744 TFDP2Q14188 446 aa15.21■□□□□ 0.03
CHD3-205ENST00000449744 QPCTQ16769 361 aa15.21■□□□□ 0.03
CHD3-205ENST00000449744 MFSD7Q6UXD7 560 aa15.21■□□□□ 0.03
CHD3-205ENST00000449744 CCNJLQ8IV13 435 aa15.21■□□□□ 0.03
CHD3-205ENST00000449744 RAVER1Q8IY67 606 aaKnown RBP15.21■□□□□ 0.03
CHD3-205ENST00000449744 CCDC170Q8IYT3 715 aa15.21■□□□□ 0.03
CHD3-205ENST00000449744 ARL14Q8N4G2 192 aa15.21■□□□□ 0.03
CHD3-205ENST00000449744 CNTD1Q8N815 330 aa15.21■□□□□ 0.03
CHD3-205ENST00000449744 EXD1Q8NHP7 514 aa15.21■□□□□ 0.03
CHD3-205ENST00000449744 ZDHHC1Q8WTX9 485 aa15.21■□□□□ 0.03
CHD3-205ENST00000449744 NAF1Q96HR8 494 aaKnown RBP15.21■□□□□ 0.03
CHD3-205ENST00000449744 HIC2Q96JB3 615 aa15.21■□□□□ 0.03
CHD3-205ENST00000449744 AGAP3Q96P47 875 aa15.21■□□□□ 0.03
CHD3-205ENST00000449744 LYSMD1Q96S90 227 aa15.21■□□□□ 0.03
CHD3-205ENST00000449744 RIOK2Q9BVS4 552 aaKnown RBP15.21■□□□□ 0.03
CHD3-205ENST00000449744 CEP41Q9BYV8 373 aa15.21■□□□□ 0.03
CHD3-205ENST00000449744 STRADBQ9C0K7 418 aa15.21■□□□□ 0.03
CHD3-205ENST00000449744 CDH19Q9H159 772 aa15.21■□□□□ 0.03
CHD3-205ENST00000449744 EPB41L5Q9HCM4 733 aa15.21■□□□□ 0.03
CHD3-205ENST00000449744 SPATS2LQ9NUQ6 558 aaKnown RBP15.21■□□□□ 0.03
CHD3-205ENST00000449744 PKD2L2Q9NZM6 624 aa15.21■□□□□ 0.03
CHD3-205ENST00000449744 TAAR2Q9P1P5 351 aa15.21■□□□□ 0.03
CHD3-205ENST00000449744 APPL1Q9UKG1 709 aa15.21■□□□□ 0.03
CHD3-205ENST00000449744 TMEM98Q9Y2Y6 226 aa15.21■□□□□ 0.03
CHD3-205ENST00000449744 PCDHGA8Q9Y5G5 932 aa15.21■□□□□ 0.03
CHD3-205ENST00000449744 ALG6Q9Y672 507 aa15.21■□□□□ 0.03
CHD3-205ENST00000449744 RNF215Q9Y6U7 377 aa15.21■□□□□ 0.03
CHD3-205ENST00000449744 A0A1W2PQM1 296 aa15.2■□□□□ 0.02
CHD3-205ENST00000449744 D6RAR5 112 aa15.2■□□□□ 0.02
CHD3-205ENST00000449744 INPP4BO15327 924 aa15.2■□□□□ 0.02
CHD3-205ENST00000449744 ZW10O43264 779 aa15.2■□□□□ 0.02
CHD3-205ENST00000449744 PSTPIP1O43586 416 aa15.2■□□□□ 0.02
CHD3-205ENST00000449744 NUDT21O43809 227 aaKnown RBP15.2■□□□□ 0.02
CHD3-205ENST00000449744 ASMTLO95671 621 aa15.2■□□□□ 0.02
CHD3-205ENST00000449744 SOD1P00441 154 aa15.2■□□□□ 0.02
CHD3-205ENST00000449744 FUCA1P04066 466 aa15.2■□□□□ 0.02
CHD3-205ENST00000449744 MMP2P08253 660 aa15.2■□□□□ 0.02
CHD3-205ENST00000449744 AK4P27144 223 aaPredicted RBP15.2■□□□□ 0.02
CHD3-205ENST00000449744 NR2C2P49116 596 aa15.2■□□□□ 0.02
CHD3-205ENST00000449744 HADHBP55084 474 aaKnown RBP15.2■□□□□ 0.02
CHD3-205ENST00000449744 INHBCP55103 352 aa15.2■□□□□ 0.02
CHD3-205ENST00000449744 GALNT3Q14435 633 aa15.2■□□□□ 0.02
CHD3-205ENST00000449744 HLTFQ14527 1009 aaKnown RBP eCLIP15.2■□□□□ 0.02
CHD3-205ENST00000449744 KAZNQ674X7 775 aa15.2■□□□□ 0.02
CHD3-205ENST00000449744 SLC30A9Q6PML9 568 aa15.2■□□□□ 0.02
CHD3-205ENST00000449744 IGF2-ASQ6U949 168 aa15.2■□□□□ 0.02
CHD3-205ENST00000449744 MARK2Q7KZI7 788 aaKnown RBP15.2■□□□□ 0.02
CHD3-205ENST00000449744 NT5DC3Q86UY8 548 aa15.2■□□□□ 0.02
CHD3-205ENST00000449744 NRROSQ86YC3 692 aa15.2■□□□□ 0.02
CHD3-205ENST00000449744 SFTPA2Q8IWL1 248 aa15.2■□□□□ 0.02
CHD3-205ENST00000449744 CRELD1Q96HD1 420 aa15.2■□□□□ 0.02
CHD3-205ENST00000449744 TMEM74Q96NL1 305 aa15.2■□□□□ 0.02
CHD3-205ENST00000449744 OLFM3Q96PB7 478 aa15.2■□□□□ 0.02
CHD3-205ENST00000449744 OR2M4Q96R27 311 aa15.2■□□□□ 0.02
CHD3-205ENST00000449744 AGAP2Q99490 1192 aa15.2■□□□□ 0.02
CHD3-205ENST00000449744 PCDHA13Q9Y5I0 950 aa15.2■□□□□ 0.02
CHD3-205ENST00000449744 FREM2Q5SZK8 3169 aa15.19■□□□□ 0.02
CHD3-205ENST00000449744 COL27A1Q8IZC6 1860 aaPredicted RBP15.19■□□□□ 0.02
CHD3-205ENST00000449744 EIF4E1BA6NMX2 242 aaKnown RBP15.19■□□□□ 0.02
CHD3-205ENST00000449744 RHPN2P1A8MT19 583 aa15.19■□□□□ 0.02
CHD3-205ENST00000449744 CST8O60676 142 aa15.19■□□□□ 0.02
CHD3-205ENST00000449744 FGF1P05230 155 aa15.19■□□□□ 0.02
CHD3-205ENST00000449744 ADCY8P40145 1251 aa15.19■□□□□ 0.02
CHD3-205ENST00000449744 ACTR1BP42025 376 aa15.19■□□□□ 0.02
CHD3-205ENST00000449744 CDKN2BP42772 138 aa15.19■□□□□ 0.02
CHD3-205ENST00000449744 SPINT3P49223 89 aa15.19■□□□□ 0.02
CHD3-205ENST00000449744 PDX1P52945 283 aa15.19■□□□□ 0.02
CHD3-205ENST00000449744 MAZP56270 477 aaKnown RBP15.19■□□□□ 0.02
CHD3-205ENST00000449744 ACTR1AP61163 376 aa15.19■□□□□ 0.02
CHD3-205ENST00000449744 CTBSQ01459 385 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms