RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 SPATA19Q7Z5L4 167 aa10.39□□□□□ -0.75
CTC1-202ENST00000449476 TBC1D21Q8IYX1 336 aa10.39□□□□□ -0.75
CTC1-202ENST00000449476 PSMG2Q969U7 264 aa10.39□□□□□ -0.75
CTC1-202ENST00000449476 HMCESQ96FZ2 354 aa10.39□□□□□ -0.75
CTC1-202ENST00000449476 DNAJC1Q96KC8 554 aaKnown RBP10.39□□□□□ -0.75
CTC1-202ENST00000449476 TSSK3Q96PN8 268 aa10.39□□□□□ -0.75
CTC1-202ENST00000449476 SLC17A6Q9P2U8 582 aa10.39□□□□□ -0.75
CTC1-202ENST00000449476 GNEQ9Y223 722 aaKnown RBP10.39□□□□□ -0.75
CTC1-202ENST00000449476 PCDHGC4Q9Y5F7 938 aa10.39□□□□□ -0.75
CTC1-202ENST00000449476 KDM3BQ7LBC6 1761 aa10.39□□□□□ -0.75
CTC1-202ENST00000449476 CARNS1A5YM72 827 aa10.39□□□□□ -0.75
CTC1-202ENST00000449476 CLTBP09497 229 aa10.39□□□□□ -0.75
CTC1-202ENST00000449476 PRKAG1P54619 331 aa10.39□□□□□ -0.75
CTC1-202ENST00000449476 GPX6P59796 221 aa10.39□□□□□ -0.75
CTC1-202ENST00000449476 NRG1Q02297 640 aaPredicted RBP10.39□□□□□ -0.75
CTC1-202ENST00000449476 GAD2Q05329 585 aa10.39□□□□□ -0.75
CTC1-202ENST00000449476 TRAF3Q13114 568 aa10.39□□□□□ -0.75
CTC1-202ENST00000449476 SPRYD7Q5W111 196 aa10.39□□□□□ -0.75
CTC1-202ENST00000449476 SPPL2CQ8IUH8 684 aa10.39□□□□□ -0.75
CTC1-202ENST00000449476 UNC5BQ8IZJ1 945 aa10.39□□□□□ -0.75
CTC1-202ENST00000449476 OFCC1Q8IZS5 231 aa10.39□□□□□ -0.75
CTC1-202ENST00000449476 RHOBTB2Q9BYZ6 727 aa10.39□□□□□ -0.75
CTC1-202ENST00000449476 SLC39A8Q9C0K1 460 aa10.39□□□□□ -0.75
CTC1-202ENST00000449476 CNTN6Q9UQ52 1028 aa10.39□□□□□ -0.75
CTC1-202ENST00000449476 PPEF2O14830 753 aa10.39□□□□□ -0.75
CTC1-202ENST00000449476 LIN7AO14910 233 aaPredicted RBP10.39□□□□□ -0.75
CTC1-202ENST00000449476 SLC25A14O95258 325 aaPredicted RBP10.39□□□□□ -0.75
CTC1-202ENST00000449476 ACADMP11310 421 aa10.39□□□□□ -0.75
CTC1-202ENST00000449476 CHRNA4P43681 627 aa10.39□□□□□ -0.75
CTC1-202ENST00000449476 GPR1P46091 355 aa10.39□□□□□ -0.75
CTC1-202ENST00000449476 SLC18A1P54219 525 aa10.39□□□□□ -0.75
CTC1-202ENST00000449476 USP46P62068 366 aa10.39□□□□□ -0.75
CTC1-202ENST00000449476 TIGD5Q53EQ6 642 aa10.39□□□□□ -0.75
CTC1-202ENST00000449476 SPANXN2Q5MJ10 180 aa10.39□□□□□ -0.75
CTC1-202ENST00000449476 KRT73Q86Y46 540 aa10.39□□□□□ -0.75
CTC1-202ENST00000449476 OR7A2PQ8NGA2 310 aa10.39□□□□□ -0.75
CTC1-202ENST00000449476 SCAMP5Q8TAC9 235 aa10.39□□□□□ -0.75
CTC1-202ENST00000449476 NTAN1Q96AB6 310 aa10.39□□□□□ -0.75
CTC1-202ENST00000449476 REXO5Q96IC2 774 aaKnown RBP10.39□□□□□ -0.75
CTC1-202ENST00000449476 NLNQ9BYT8 704 aa10.39□□□□□ -0.75
CTC1-202ENST00000449476 BCO2Q9BYV7 579 aa10.39□□□□□ -0.75
CTC1-202ENST00000449476 PIGVQ9NUD9 493 aa10.39□□□□□ -0.75
CTC1-202ENST00000449476 MAGEL2Q9UJ55 1249 aa10.39□□□□□ -0.75
CTC1-202ENST00000449476 PCDHB1Q9Y5F3 818 aa10.39□□□□□ -0.75
CTC1-202ENST00000449476 WASF2Q9Y6W5 498 aa10.39□□□□□ -0.75
CTC1-202ENST00000449476 KIF13AQ9H1H9 1805 aa10.39□□□□□ -0.75
CTC1-202ENST00000449476 LOC100506127A0A0U1RQW1 187 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 C9JVG2 144 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 ACSL4O60488 711 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 LYNP07948 512 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 SCNN1AP37088 669 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 TSNQ15631 228 aaKnown RBP10.38□□□□□ -0.75
CTC1-202ENST00000449476 MSS51Q4VC12 460 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 ACSBG2Q5FVE4 666 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 NCBP2-AS2Q69YL0 99 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 RAET1GQ6H3X3 334 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 LINGO4Q6UY18 593 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 CERS6Q6ZMG9 384 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 ZC3H7AQ8IWR0 971 aaKnown RBP10.38□□□□□ -0.75
CTC1-202ENST00000449476 KBTBD2Q8IY47 623 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 NELL1Q92832 810 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 DGCR14Q96DF8 476 aaKnown RBP10.38□□□□□ -0.75
CTC1-202ENST00000449476 RNF39Q9H2S5 420 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 RPS6KB2Q9UBS0 482 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 SAMHD1Q9Y3Z3 626 aaKnown RBP10.38□□□□□ -0.75
CTC1-202ENST00000449476 ARIH1Q9Y4X5 557 aaPredicted RBP10.38□□□□□ -0.75
CTC1-202ENST00000449476 FADS3Q9Y5Q0 445 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 ADH1AP07327 375 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 ZBTB48P10074 688 aaPredicted RBP10.38□□□□□ -0.75
CTC1-202ENST00000449476 PRDX6P30041 224 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 GNPDA1P46926 289 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 CLCQ05315 142 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 LCP2Q13094 533 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 PRKD1Q15139 912 aaPredicted RBP10.38□□□□□ -0.75
CTC1-202ENST00000449476 RNF220Q5VTB9 566 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 GPR107Q5VW38 600 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 GLYATQ6IB77 296 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 UBE2R2Q712K3 238 aaPredicted RBP10.38□□□□□ -0.75
CTC1-202ENST00000449476 CIR1Q86X95 450 aaPredicted RBP10.38□□□□□ -0.75
CTC1-202ENST00000449476 PROSER1Q86XN7 944 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 OR2T34Q8NGX1 318 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 OR2T3Q8NH03 318 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 CLHC1Q8NHS4 586 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 PPP1R16AQ96I34 528 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 ITCHQ96J02 903 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 UNC93B1Q9H1C4 597 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 EPB41L4BQ9H329 900 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 BRD9Q9H8M2 597 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 CACNG4Q9UBN1 327 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 RSL24D1Q9UHA3 163 aaKnown RBP10.38□□□□□ -0.75
CTC1-202ENST00000449476 EVLQ9UI08 416 aaPredicted RBP10.38□□□□□ -0.75
CTC1-202ENST00000449476 ENTPD4Q9Y227 616 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 POMPQ9Y244 141 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 STYXL1Q9Y6J8 313 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 PTPRJQ12913 1337 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 PNMA8CA0A1B0GUJ8 204 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 DYTNA2CJ06 578 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 SLC7A4O43246 635 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 MYL12AP19105 171 aa10.38□□□□□ -0.75
CTC1-202ENST00000449476 TALDO1P37837 337 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms