RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 RYBPQ8N488 228 aaPredicted RBP10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 TTC30BQ8N4P2 665 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 FAM160A2Q8N612 972 aaPredicted RBP10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 PIH1D2Q8WWB5 315 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 SMG7Q92540 1137 aaKnown RBP10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 UBXN10Q96LJ8 280 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 NDNQ99608 321 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 OLFM1Q99784 485 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 AARSD1Q9BTE6 412 aaKnown RBP10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 CPEB1Q9BZB8 566 aaKnown RBP10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 MYLK2Q9H1R3 596 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 TLE6Q9H808 572 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 ECT2Q9H8V3 914 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 CPSF2Q9P2I0 782 aaKnown RBP10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 XPR1Q9UBH6 696 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 INTS6Q9UL03 887 aaKnown RBP10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 SLC8A2Q9UPR5 921 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 SORCS3Q9UPU3 1222 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 APOBEC2Q9Y235 224 aaKnown RBP10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 DNAJC16Q9Y2G8 782 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 SLC30A1Q9Y6M5 507 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 NOTCH4Q99466 2003 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 A0A0J9YYE9 177 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 CCDC189A1A4V9 331 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 TARM1B6A8C7 271 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 K7ERQ8 282 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 NRG2O14511 850 aaPredicted RBP10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 SMAD6O43541 496 aaKnown RBP10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 PAPLNO95428 1278 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 PRAMEF12O95522 483 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 POP4O95707 220 aaKnown RBP10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 TRBC1P01850 177 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 PYGLP06737 847 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 CCDC166P0CW27 439 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 CD9P21926 228 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 ATP5F1P24539 256 aaPredicted RBP10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 NFKBIAP25963 317 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 MC4RP32245 332 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 NNMTP40261 264 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 GLRBP48167 497 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 PTPN5P54829 565 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 AQP5P55064 265 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 DNAJB13P59910 316 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 ECT2LQ008S8 904 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 CACNG1Q06432 222 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 CSHL1Q14406 222 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 TBCCQ15814 346 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 TECRLQ5HYJ1 363 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 FAM91A1Q658Y4 838 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 C22orf39Q6P5X5 142 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 CLNKQ7Z7G1 428 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 MTDHQ86UE4 582 aaKnown RBP10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 CAMK1DQ8IU85 385 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 SLC22A9Q8IVM8 553 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 TMEM151AQ8N4L1 468 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 HEXDCQ8WVB3 486 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 PPP2R3CQ969Q6 453 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 SKA1Q96BD8 255 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 ZNF707Q96C28 371 aaPredicted RBP10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 ZNF641Q96N77 438 aaPredicted RBP10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 GPR78Q96P69 363 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 CDCA3Q99618 268 aaPredicted RBP10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 DRC3Q9H069 523 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 ILKAPQ9H0C8 392 aaPredicted RBP10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 SFXN1Q9H9B4 322 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 DZANK1Q9NVP4 752 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 POLR3BQ9NW08 1133 aaPredicted RBP10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 DNAJC28Q9NX36 388 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 TAS2R13Q9NYV9 303 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 NCKIPSDQ9NZQ3 722 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 IL17CQ9P0M4 197 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 APPL1Q9UKG1 709 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 CLEC4EQ9ULY5 219 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 CRYL1Q9Y2S2 319 aa10.55□□□□□ -0.72
VIPAS39-203ENST00000448935 UBA6A0AVT1 1052 aaPredicted RBP10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 CAPN8A6NHC0 703 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 PER2O15055 1255 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 ITM2AO43736 263 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 NPHS1O60500 1241 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 SRP72O76094 671 aaKnown RBP10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 ARHGEF15O94989 841 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 SLC4A1P02730 911 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 KITP10721 976 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 ALOX15P16050 662 aaPredicted RBP10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 CEBPBP17676 345 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 POLR2EP19388 210 aaKnown RBP10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 SERPINB3P29508 390 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 PTGER3P43115 390 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 RECQLP46063 649 aaPredicted RBP10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 EMP3P54852 163 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 ADARP55265 1226 aaKnown RBP10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 NTHL1P78549 312 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 PRKAA1Q13131 559 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 RCN2Q14257 317 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 SEMA3AQ14563 771 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 ZNF460Q14592 562 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 PTPRCAPQ14761 206 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 DUSP6Q16828 381 aa10.54□□□□□ -0.72
VIPAS39-203ENST00000448935 MYLK3Q32MK0 819 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms