RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 RBM12BQ8IXT5 1001 aaKnown RBP12.89□□□□□ -0.35
SHC1-210ENST00000448116 KLHDC8BQ8IXV7 354 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 MIER2Q8N344 545 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 ESAMQ96AP7 390 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 VPS33AQ96AX1 596 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 TCF12Q99081 682 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 ERVK-6Q9BXR3 956 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 MAP10Q9P2G4 905 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 CNOT11Q9UKZ1 510 aaKnown RBP12.89□□□□□ -0.35
SHC1-210ENST00000448116 PLXNB2O15031 1838 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 H3BNH8 94 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 BAIAP3O94812 1187 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 CDK4P11802 303 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 NCK1P16333 377 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 GALK1P51570 392 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 TXNL4AP83876 142 aaKnown RBP12.89□□□□□ -0.35
SHC1-210ENST00000448116 OR4D1Q15615 310 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 GDF6Q6KF10 455 aaPredicted RBP12.89□□□□□ -0.35
SHC1-210ENST00000448116 FAM45BPQ6NSW5 357 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 CLVS1Q8IUQ0 354 aaPredicted RBP12.89□□□□□ -0.35
SHC1-210ENST00000448116 DCBLD1Q8N8Z6 715 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 RIN3Q8TB24 985 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 FAM45AQ8TCE6 357 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 RSPH1Q8WYR4 309 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 TRMOQ9BU70 441 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 MRGBPQ9NV56 204 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.89□□□□□ -0.353e-7■□□□□ 9.8
SHC1-210ENST00000448116 TMCO1Q9UM00 188 aa12.89□□□□□ -0.35
SHC1-210ENST00000448116 BPTFQ12830 3046 aa12.88□□□□□ -0.35
SHC1-210ENST00000448116 CCDC162PA2VCL2 907 aa12.88□□□□□ -0.35
SHC1-210ENST00000448116 CD3EAPO15446 510 aaKnown RBP12.88□□□□□ -0.35
SHC1-210ENST00000448116 GRK4P32298 578 aa12.88□□□□□ -0.35
SHC1-210ENST00000448116 APLP1P51693 650 aa12.88□□□□□ -0.35
SHC1-210ENST00000448116 DIO3P55073 304 aa12.88□□□□□ -0.35
SHC1-210ENST00000448116 YWHAHQ04917 246 aaPredicted RBP12.88□□□□□ -0.35
SHC1-210ENST00000448116 PABPC1LQ4VXU2 614 aaKnown RBP12.88□□□□□ -0.35
SHC1-210ENST00000448116 CARM1Q86X55 608 aa12.88□□□□□ -0.35
SHC1-210ENST00000448116 CCDC117Q8IWD4 279 aaPredicted RBP12.88□□□□□ -0.35
SHC1-210ENST00000448116 SLC15A3Q8IY34 581 aa12.88□□□□□ -0.35
SHC1-210ENST00000448116 STON2Q8WXE9 905 aa12.88□□□□□ -0.35
SHC1-210ENST00000448116 TOP1MTQ969P6 601 aa12.88□□□□□ -0.35
SHC1-210ENST00000448116 SERPINB11Q96P15 392 aa12.88□□□□□ -0.35
SHC1-210ENST00000448116 RPRD1AQ96P16 312 aaPredicted RBP12.88□□□□□ -0.35
SHC1-210ENST00000448116 DCUN1D5Q9BTE7 237 aa12.88□□□□□ -0.35
SHC1-210ENST00000448116 CLK4Q9HAZ1 481 aaKnown RBP12.88□□□□□ -0.35
SHC1-210ENST00000448116 PADI3Q9ULW8 664 aa12.88□□□□□ -0.35
SHC1-210ENST00000448116 CROCCQ5TZA2 2017 aa12.88□□□□□ -0.35
SHC1-210ENST00000448116 MGEA5O60502 916 aa12.88□□□□□ -0.35
SHC1-210ENST00000448116 RHOBTB1O94844 696 aa12.88□□□□□ -0.35
SHC1-210ENST00000448116 ZNF23P17027 643 aa12.88□□□□□ -0.35
SHC1-210ENST00000448116 INPP5AQ14642 412 aa12.88□□□□□ -0.35
SHC1-210ENST00000448116 ZNF549Q6P9A3 640 aa12.88□□□□□ -0.35
SHC1-210ENST00000448116 IQCF2Q8IXL9 164 aa12.88□□□□□ -0.35
SHC1-210ENST00000448116 ADAM2Q99965 735 aa12.88□□□□□ -0.35
SHC1-210ENST00000448116 ZYG11BQ9C0D3 744 aa12.88□□□□□ -0.35
SHC1-210ENST00000448116 MFSD1Q9H3U5 465 aa12.88□□□□□ -0.35
SHC1-210ENST00000448116 SARDHQ9UL12 918 aa12.88□□□□□ -0.35
SHC1-210ENST00000448116 A0A1B0GTL3 188 aa12.87□□□□□ -0.35
SHC1-210ENST00000448116 CD1DP15813 335 aa12.87□□□□□ -0.35
SHC1-210ENST00000448116 PSMA4P25789 261 aaKnown RBP12.87□□□□□ -0.35
SHC1-210ENST00000448116 HOXC13P31276 330 aa12.87□□□□□ -0.35
SHC1-210ENST00000448116 FMO4P31512 558 aa12.87□□□□□ -0.35
SHC1-210ENST00000448116 PSMD8P48556 350 aa12.87□□□□□ -0.35
SHC1-210ENST00000448116 HPCAP84074 193 aa12.87□□□□□ -0.35
SHC1-210ENST00000448116 MAPRE1Q15691 268 aaKnown RBP12.87□□□□□ -0.35
SHC1-210ENST00000448116 CYP51A1Q16850 503 aa12.87□□□□□ -0.35
SHC1-210ENST00000448116 RABL3Q5HYI8 236 aa12.87□□□□□ -0.35
SHC1-210ENST00000448116 ERMP1Q7Z2K6 904 aa12.87□□□□□ -0.35
SHC1-210ENST00000448116 FIBCD1Q8N539 461 aa12.87□□□□□ -0.35
SHC1-210ENST00000448116 B3GALT6Q96L58 329 aa12.87□□□□□ -0.35
SHC1-210ENST00000448116 ARNT2Q9HBZ2 717 aa12.87□□□□□ -0.35
SHC1-210ENST00000448116 DUS2Q9NX74 493 aaKnown RBP12.87□□□□□ -0.35
SHC1-210ENST00000448116 PDCD11Q14690 1871 aaKnown RBP12.87□□□□□ -0.35
SHC1-210ENST00000448116 CLASP2O75122 1294 aaKnown RBP12.87□□□□□ -0.35
SHC1-210ENST00000448116 SOAT2O75908 522 aa12.87□□□□□ -0.35
SHC1-210ENST00000448116 PEX11BO96011 259 aa12.87□□□□□ -0.35
SHC1-210ENST00000448116 CAPNS1P04632 268 aa12.87□□□□□ -0.35
SHC1-210ENST00000448116 EEF1DP29692 281 aaKnown RBP12.87□□□□□ -0.35
SHC1-210ENST00000448116 ACVRL1P37023 503 aa12.87□□□□□ -0.35
SHC1-210ENST00000448116 ESRRGP62508 458 aa12.87□□□□□ -0.35
SHC1-210ENST00000448116 PLIN5Q00G26 463 aa12.87□□□□□ -0.35
SHC1-210ENST00000448116 NFYCQ13952 458 aa12.87□□□□□ -0.35
SHC1-210ENST00000448116 POLD3Q15054 466 aaPredicted RBP12.87□□□□□ -0.35
SHC1-210ENST00000448116 MRNIPQ6NTE8 343 aa12.87□□□□□ -0.35
SHC1-210ENST00000448116 FAM117BQ6P1L5 589 aa12.87□□□□□ -0.35
SHC1-210ENST00000448116 OFCC1Q8IZS5 231 aa12.87□□□□□ -0.35
SHC1-210ENST00000448116 IGSF8Q969P0 613 aa12.87□□□□□ -0.35
SHC1-210ENST00000448116 SEPHS2Q99611 448 aa12.87□□□□□ -0.35
SHC1-210ENST00000448116 CCDC68Q9H2F9 335 aa12.87□□□□□ -0.35
SHC1-210ENST00000448116 SOX17Q9H6I2 414 aaPredicted RBP12.87□□□□□ -0.35
SHC1-210ENST00000448116 SMOXQ9NWM0 555 aa12.87□□□□□ -0.35
SHC1-210ENST00000448116 GMIPQ9P107 970 aa12.87□□□□□ -0.35
SHC1-210ENST00000448116 PRG3Q9Y2Y8 225 aaPredicted RBP12.87□□□□□ -0.35
SHC1-210ENST00000448116 ACTL7AQ9Y615 435 aa12.87□□□□□ -0.35
SHC1-210ENST00000448116 GPR182O15218 404 aa12.87□□□□□ -0.35
SHC1-210ENST00000448116 LDB2O43679 373 aa12.87□□□□□ -0.35
SHC1-210ENST00000448116 MMP2P08253 660 aa12.87□□□□□ -0.35
SHC1-210ENST00000448116 LBPP18428 481 aa12.87□□□□□ -0.35
SHC1-210ENST00000448116 FASP25445 335 aa12.87□□□□□ -0.35
SHC1-210ENST00000448116 OXTRP30559 389 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms