RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 ILF2Q12905 390 aaKnown RBP16.01■□□□□ 0.15
CNOT3-204ENST00000447684 PSMD5Q16401 504 aa16.01■□□□□ 0.15
CNOT3-204ENST00000447684 DPY19L1Q2PZI1 675 aa16.01■□□□□ 0.15
CNOT3-204ENST00000447684 CATSPEREQ5SY80 951 aa16.01■□□□□ 0.15
CNOT3-204ENST00000447684 MIER2Q8N344 545 aa16.01■□□□□ 0.15
CNOT3-204ENST00000447684 DNERQ8NFT8 737 aa16.01■□□□□ 0.15
CNOT3-204ENST00000447684 C17orf80Q9BSJ5 609 aa16.01■□□□□ 0.15
CNOT3-204ENST00000447684 MLPHQ9BV36 600 aaPredicted RBP16.01■□□□□ 0.15
CNOT3-204ENST00000447684 CDT1Q9H211 546 aa16.01■□□□□ 0.15
CNOT3-204ENST00000447684 SMURF2Q9HAU4 748 aa16.01■□□□□ 0.15
CNOT3-204ENST00000447684 CYP3A43Q9HB55 503 aa16.01■□□□□ 0.15
CNOT3-204ENST00000447684 SETD4Q9NVD3 440 aa16.01■□□□□ 0.15
CNOT3-204ENST00000447684 ABCD2Q9UBJ2 740 aa16.01■□□□□ 0.15
CNOT3-204ENST00000447684 EVLQ9UI08 416 aaPredicted RBP16.01■□□□□ 0.15
CNOT3-204ENST00000447684 PCDHGA11Q9Y5H2 935 aa16.01■□□□□ 0.15
CNOT3-204ENST00000447684 PCNTO95613 3336 aa16.01■□□□□ 0.15
CNOT3-204ENST00000447684 TANC1Q9C0D5 1861 aa16.01■□□□□ 0.15
CNOT3-204ENST00000447684 TNFRSF10AO00220 468 aa16.01■□□□□ 0.15
CNOT3-204ENST00000447684 IDH3BO43837 385 aa16.01■□□□□ 0.15
CNOT3-204ENST00000447684 GP2P55259 537 aaKnown RBP16.01■□□□□ 0.15
CNOT3-204ENST00000447684 GRB7Q14451 532 aa16.01■□□□□ 0.15
CNOT3-204ENST00000447684 ADPRMQ3LIE5 342 aa16.01■□□□□ 0.15
CNOT3-204ENST00000447684 UGT3A2Q3SY77 523 aa16.01■□□□□ 0.15
CNOT3-204ENST00000447684 LARP4Q71RC2 724 aaKnown RBP eCLIP16.01■□□□□ 0.15
CNOT3-204ENST00000447684 TMBIM1Q969X1 311 aa16.01■□□□□ 0.15
CNOT3-204ENST00000447684 BIRC7Q96CA5 298 aa16.01■□□□□ 0.15
CNOT3-204ENST00000447684 NODALQ96S42 347 aa16.01■□□□□ 0.15
CNOT3-204ENST00000447684 DDX28Q9NUL7 540 aaKnown RBP16.01■□□□□ 0.15
CNOT3-204ENST00000447684 UBFD1O14562 309 aaKnown RBP16■□□□□ 0.15
CNOT3-204ENST00000447684 HCRTO43612 131 aa16■□□□□ 0.15
CNOT3-204ENST00000447684 TBC1D4O60343 1298 aa16■□□□□ 0.15
CNOT3-204ENST00000447684 RFPL2O75678 378 aa16■□□□□ 0.15
CNOT3-204ENST00000447684 GSNP06396 782 aa16■□□□□ 0.15
CNOT3-204ENST00000447684 FSHRP23945 695 aa16■□□□□ 0.15
CNOT3-204ENST00000447684 CD40LGP29965 261 aa16■□□□□ 0.15
CNOT3-204ENST00000447684 NCS1P62166 190 aa16■□□□□ 0.15
CNOT3-204ENST00000447684 TARBP2Q15633 366 aaKnown RBP16■□□□□ 0.15
CNOT3-204ENST00000447684 RBM48Q5RL73 367 aaKnown RBP16■□□□□ 0.15
CNOT3-204ENST00000447684 C6orf141Q5SZD1 244 aa16■□□□□ 0.15
CNOT3-204ENST00000447684 ZNF470Q6ECI4 717 aa16■□□□□ 0.15
CNOT3-204ENST00000447684 ELMOD1Q8N336 334 aa16■□□□□ 0.15
CNOT3-204ENST00000447684 NGLY1Q96IV0 654 aa16■□□□□ 0.15
CNOT3-204ENST00000447684 RPAP3Q9H6T3 665 aaPredicted RBP16■□□□□ 0.15
CNOT3-204ENST00000447684 BBIP1A8MTZ0 92 aa16■□□□□ 0.15
CNOT3-204ENST00000447684 EEF2KO00418 725 aaKnown RBP16■□□□□ 0.15
CNOT3-204ENST00000447684 RAD51BO15315 384 aa16■□□□□ 0.15
CNOT3-204ENST00000447684 SNX2O60749 519 aa16■□□□□ 0.15
CNOT3-204ENST00000447684 KRT8P05787 483 aa16■□□□□ 0.15
CNOT3-204ENST00000447684 STAG3L1P0CL83 205 aa16■□□□□ 0.15
CNOT3-204ENST00000447684 VAC14Q08AM6 782 aa16■□□□□ 0.15
CNOT3-204ENST00000447684 DAG1Q14118 895 aa16■□□□□ 0.15
CNOT3-204ENST00000447684 MINDY1Q8N5J2 469 aa16■□□□□ 0.15
CNOT3-204ENST00000447684 TUBGCP3Q96CW5 907 aa16■□□□□ 0.15
CNOT3-204ENST00000447684 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16■□□□□ 0.15
CNOT3-204ENST00000447684 SSC5DA1L4H1 1573 aa16■□□□□ 0.15
CNOT3-204ENST00000447684 MAGEB16A2A368 324 aa15.99■□□□□ 0.15
CNOT3-204ENST00000447684 VWA5AO00534 786 aa15.99■□□□□ 0.15
CNOT3-204ENST00000447684 FARP2O94887 1054 aaPredicted RBP15.99■□□□□ 0.15
CNOT3-204ENST00000447684 LRIG2O94898 1065 aa15.99■□□□□ 0.15
CNOT3-204ENST00000447684 CHRNB1P11230 501 aa15.99■□□□□ 0.15
CNOT3-204ENST00000447684 ALDH3A2P51648 485 aa15.99■□□□□ 0.15
CNOT3-204ENST00000447684 KPNA2P52292 529 aaKnown RBP15.99■□□□□ 0.15
CNOT3-204ENST00000447684 UGP2Q16851 508 aa15.99■□□□□ 0.15
CNOT3-204ENST00000447684 RBM20Q5T481 1227 aaKnown RBP15.99■□□□□ 0.15
CNOT3-204ENST00000447684 ESRP1Q6NXG1 681 aaKnown RBP15.99■□□□□ 0.15
CNOT3-204ENST00000447684 CYHR1Q6ZMK1 362 aa15.99■□□□□ 0.15
CNOT3-204ENST00000447684 HS3ST5Q8IZT8 346 aa15.99■□□□□ 0.15
CNOT3-204ENST00000447684 MUL1Q969V5 352 aa15.99■□□□□ 0.15
CNOT3-204ENST00000447684 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.99■□□□□ 0.15
CNOT3-204ENST00000447684 VMP1Q96GC9 406 aa15.99■□□□□ 0.15
CNOT3-204ENST00000447684 MRPL45Q9BRJ2 306 aaKnown RBP15.99■□□□□ 0.15
CNOT3-204ENST00000447684 MCMBPQ9BTE3 642 aa15.99■□□□□ 0.15
CNOT3-204ENST00000447684 MOV10Q9HCE1 1003 aaKnown RBP15.99■□□□□ 0.15
CNOT3-204ENST00000447684 THG1LQ9NWX6 298 aaKnown RBP15.99■□□□□ 0.15
CNOT3-204ENST00000447684 NSMCE4AQ9NXX6 385 aa15.99■□□□□ 0.15
CNOT3-204ENST00000447684 BTRCQ9Y297 605 aa15.99■□□□□ 0.15
CNOT3-204ENST00000447684 XPNPEP2O43895 674 aa15.99■□□□□ 0.15
CNOT3-204ENST00000447684 PSMB9P28065 219 aa15.99■□□□□ 0.15
CNOT3-204ENST00000447684 CD68P34810 354 aaPredicted RBP15.99■□□□□ 0.15
CNOT3-204ENST00000447684 TGFBR1P36897 503 aa15.99■□□□□ 0.15
CNOT3-204ENST00000447684 SLC1A2P43004 574 aa15.99■□□□□ 0.15
CNOT3-204ENST00000447684 NPY2RP49146 381 aa15.99■□□□□ 0.15
CNOT3-204ENST00000447684 STAT5BP51692 787 aa15.99■□□□□ 0.15
CNOT3-204ENST00000447684 CCNA1P78396 465 aa15.99■□□□□ 0.15
CNOT3-204ENST00000447684 E2F2Q14209 437 aa15.99■□□□□ 0.15
CNOT3-204ENST00000447684 ACAP2Q15057 778 aa15.99■□□□□ 0.15
CNOT3-204ENST00000447684 CTU2Q2VPK5 515 aaKnown RBP15.99■□□□□ 0.15
CNOT3-204ENST00000447684 HABP4Q5JVS0 413 aaKnown RBP15.99■□□□□ 0.15
CNOT3-204ENST00000447684 ANKRD34AQ69YU3 496 aa15.99■□□□□ 0.15
CNOT3-204ENST00000447684 RALGPS2Q86X27 583 aaPredicted RBP15.99■□□□□ 0.15
CNOT3-204ENST00000447684 RYBPQ8N488 228 aaPredicted RBP15.99■□□□□ 0.15
CNOT3-204ENST00000447684 CHDHQ8NE62 594 aaPredicted RBP15.99■□□□□ 0.15
CNOT3-204ENST00000447684 ZNF555Q8NEP9 628 aa15.99■□□□□ 0.15
CNOT3-204ENST00000447684 OR6Q1Q8NGQ2 317 aa15.99■□□□□ 0.15
CNOT3-204ENST00000447684 TRAPPC12Q8WVT3 735 aa15.99■□□□□ 0.15
CNOT3-204ENST00000447684 SLC2A6Q9UGQ3 507 aa15.99■□□□□ 0.15
CNOT3-204ENST00000447684 FZD10Q9ULW2 581 aa15.99■□□□□ 0.15
CNOT3-204ENST00000447684 A0A087WZ62 844 aa15.98■□□□□ 0.15
CNOT3-204ENST00000447684 ZNF99A8MXY4 864 aaPredicted RBP15.98■□□□□ 0.15
CNOT3-204ENST00000447684 PPP6CO00743 305 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms