RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 AP2M1Q96CW1 435 aa20.68■□□□□ 0.9
SDC1-205ENST00000447124 SCARF2Q96GP6 870 aaPredicted RBP20.68■□□□□ 0.9
SDC1-205ENST00000447124 GFM1Q96RP9 751 aaKnown RBP20.68■□□□□ 0.9
SDC1-205ENST00000447124 WDR24Q96S15 920 aa20.68■□□□□ 0.9
SDC1-205ENST00000447124 FOXP3Q9BZS1 431 aa20.68■□□□□ 0.9
SDC1-205ENST00000447124 PCDH9Q9HC56 1237 aa20.68■□□□□ 0.9
SDC1-205ENST00000447124 TRNAU1APQ9NX07 287 aaKnown RBP20.68■□□□□ 0.9
SDC1-205ENST00000447124 LRIT1Q9P2V4 623 aa20.68■□□□□ 0.9
SDC1-205ENST00000447124 ATXN7L1Q9ULK2 861 aaPredicted RBP20.68■□□□□ 0.9
SDC1-205ENST00000447124 HYOU1Q9Y4L1 999 aa20.68■□□□□ 0.9
SDC1-205ENST00000447124 HEY1Q9Y5J3 304 aa20.68■□□□□ 0.9
SDC1-205ENST00000447124 SMG1Q96Q15 3661 aaKnown RBP20.67■□□□□ 0.9
SDC1-205ENST00000447124 CAPN8A6NHC0 703 aa20.67■□□□□ 0.9
SDC1-205ENST00000447124 CDRT15L2A8MXV6 281 aa20.67■□□□□ 0.9
SDC1-205ENST00000447124 ZNF487B1APH4 448 aa20.67■□□□□ 0.9
SDC1-205ENST00000447124 B4GAT1O43505 415 aa20.67■□□□□ 0.9
SDC1-205ENST00000447124 IVLP07476 585 aa20.67■□□□□ 0.9
SDC1-205ENST00000447124 TPM1P09493 284 aa20.67■□□□□ 0.9
SDC1-205ENST00000447124 KRT10P13645 584 aa20.67■□□□□ 0.9
SDC1-205ENST00000447124 PNLIPP16233 465 aa20.67■□□□□ 0.9
SDC1-205ENST00000447124 RBMS1P29558 406 aaKnown RBP20.67■□□□□ 0.9
SDC1-205ENST00000447124 ADCY8P40145 1251 aa20.67■□□□□ 0.9
SDC1-205ENST00000447124 CD86P42081 329 aa20.67■□□□□ 0.9
SDC1-205ENST00000447124 MAZP56270 477 aaKnown RBP20.67■□□□□ 0.9
SDC1-205ENST00000447124 IFI35P80217 286 aaPredicted RBP20.67■□□□□ 0.9
SDC1-205ENST00000447124 B4GALNT1Q00973 533 aa20.67■□□□□ 0.9
SDC1-205ENST00000447124 CTBSQ01459 385 aa20.67■□□□□ 0.9
SDC1-205ENST00000447124 TCEAL1Q15170 157 aa20.67■□□□□ 0.9
SDC1-205ENST00000447124 QPCTQ16769 361 aa20.67■□□□□ 0.9
SDC1-205ENST00000447124 ADAMTSL4Q6UY14 1074 aa20.67■□□□□ 0.9
SDC1-205ENST00000447124 B4GALNT4Q76KP1 1039 aa20.67■□□□□ 0.9
SDC1-205ENST00000447124 TRIM74Q86UV6 250 aa20.67■□□□□ 0.9
SDC1-205ENST00000447124 CCNJLQ8IV13 435 aa20.67■□□□□ 0.9
SDC1-205ENST00000447124 RHOT2Q8IXI1 618 aa20.67■□□□□ 0.9
SDC1-205ENST00000447124 LPCAT1Q8NF37 534 aa20.67■□□□□ 0.9
SDC1-205ENST00000447124 RNF25Q96BH1 459 aaPredicted RBP20.67■□□□□ 0.9
SDC1-205ENST00000447124 LYSMD1Q96S90 227 aa20.67■□□□□ 0.9
SDC1-205ENST00000447124 RIOK2Q9BVS4 552 aaKnown RBP20.67■□□□□ 0.9
SDC1-205ENST00000447124 THSD1Q9NS62 852 aa20.67■□□□□ 0.9
SDC1-205ENST00000447124 TAAR2Q9P1P5 351 aa20.67■□□□□ 0.9
SDC1-205ENST00000447124 MGAQ8IWI9 3026 aa20.66■□□□□ 0.9
SDC1-205ENST00000447124 CCDC187A0A096LP49 1063 aa20.66■□□□□ 0.9
SDC1-205ENST00000447124 AKR1B15C9JRZ8 316 aaPredicted RBP20.66■□□□□ 0.9
SDC1-205ENST00000447124 D6RAR5 112 aa20.66■□□□□ 0.9
SDC1-205ENST00000447124 TNFSF15O95150 251 aa20.66■□□□□ 0.9
SDC1-205ENST00000447124 ZNF30P17039 623 aa20.66■□□□□ 0.9
SDC1-205ENST00000447124 RPL26P61254 145 aaKnown RBP20.66■□□□□ 0.9
SDC1-205ENST00000447124 LRRC38Q5VT99 294 aa20.66■□□□□ 0.9
SDC1-205ENST00000447124 DOK6Q6PKX4 331 aa20.66■□□□□ 0.9
SDC1-205ENST00000447124 ZNF765Q7L2R6 523 aa20.66■□□□□ 0.9
SDC1-205ENST00000447124 TMPRSS9Q7Z410 1059 aa20.66■□□□□ 0.9
SDC1-205ENST00000447124 VSIG1Q86XK7 387 aa20.66■□□□□ 0.9
SDC1-205ENST00000447124 ZDHHC1Q8WTX9 485 aa20.66■□□□□ 0.9
SDC1-205ENST00000447124 LIN37Q96GY3 246 aaPredicted RBP20.66■□□□□ 0.9
SDC1-205ENST00000447124 GSDMCQ9BYG8 508 aa20.66■□□□□ 0.9
SDC1-205ENST00000447124 CEP41Q9BYV8 373 aa20.66■□□□□ 0.9
SDC1-205ENST00000447124 CNOT6Q9ULM6 557 aaKnown RBP20.66■□□□□ 0.9
SDC1-205ENST00000447124 RPL26L1Q9UNX3 145 aaKnown RBP20.66■□□□□ 0.9
SDC1-205ENST00000447124 AHCTF1Q8WYP5 2266 aa20.65■□□□□ 0.9
SDC1-205ENST00000447124 APOL1O14791 398 aa20.65■□□□□ 0.9
SDC1-205ENST00000447124 NUDT21O43809 227 aaKnown RBP20.65■□□□□ 0.9
SDC1-205ENST00000447124 TNNT1P13805 278 aa20.65■□□□□ 0.9
SDC1-205ENST00000447124 COMTP21964 271 aa20.65■□□□□ 0.9
SDC1-205ENST00000447124 ZFP36L1Q07352 338 aaKnown RBP20.65■□□□□ 0.9
SDC1-205ENST00000447124 COL9A2Q14055 689 aaPredicted RBP20.65■□□□□ 0.9
SDC1-205ENST00000447124 MFSD7Q6UXD7 560 aa20.65■□□□□ 0.9
SDC1-205ENST00000447124 SPRED1Q7Z699 444 aa20.65■□□□□ 0.9
SDC1-205ENST00000447124 NRSN1Q8IZ57 195 aa20.65■□□□□ 0.9
SDC1-205ENST00000447124 ARL14Q8N4G2 192 aa20.65■□□□□ 0.9
SDC1-205ENST00000447124 PATE1Q8WXA2 126 aa20.65■□□□□ 0.9
SDC1-205ENST00000447124 EID2BQ96D98 161 aa20.65■□□□□ 0.9
SDC1-205ENST00000447124 COX14Q96I36 57 aa20.65■□□□□ 0.9
SDC1-205ENST00000447124 OLFM3Q96PB7 478 aa20.65■□□□□ 0.9
SDC1-205ENST00000447124 MAK16Q9BXY0 300 aaKnown RBP20.65■□□□□ 0.9
SDC1-205ENST00000447124 EPB41L5Q9HCM4 733 aa20.65■□□□□ 0.9
SDC1-205ENST00000447124 INTUQ9ULD6 942 aa20.65■□□□□ 0.9
SDC1-205ENST00000447124 SSUH2Q9Y2M2 353 aa20.65■□□□□ 0.9
SDC1-205ENST00000447124 PCYT1BQ9Y5K3 369 aaPredicted RBP20.65■□□□□ 0.9
SDC1-205ENST00000447124 ANKRD66B4E2M5 251 aa20.64■□□□□ 0.89
SDC1-205ENST00000447124 ECEL1O95672 775 aa20.64■□□□□ 0.89
SDC1-205ENST00000447124 KRT1P04264 644 aa20.64■□□□□ 0.89
SDC1-205ENST00000447124 SLC1A1P43005 524 aa20.64■□□□□ 0.89
SDC1-205ENST00000447124 INHBCP55103 352 aa20.64■□□□□ 0.89
SDC1-205ENST00000447124 AP1B1Q10567 949 aa20.64■□□□□ 0.89
SDC1-205ENST00000447124 ILF3Q12906 894 aaKnown RBP eCLIP20.64■□□□□ 0.89
SDC1-205ENST00000447124 PYCR3Q53H96 274 aa20.64■□□□□ 0.89
SDC1-205ENST00000447124 SLC30A9Q6PML9 568 aa20.64■□□□□ 0.89
SDC1-205ENST00000447124 CLEC14AQ86T13 490 aa20.64■□□□□ 0.89
SDC1-205ENST00000447124 RFX6Q8HWS3 928 aa20.64■□□□□ 0.89
SDC1-205ENST00000447124 CNGA4Q8IV77 575 aa20.64■□□□□ 0.89
SDC1-205ENST00000447124 NAGSQ8N159 534 aa20.64■□□□□ 0.89
SDC1-205ENST00000447124 FBXO39Q8N4B4 442 aa20.64■□□□□ 0.89
SDC1-205ENST00000447124 TC2NQ8N9U0 490 aa20.64■□□□□ 0.89
SDC1-205ENST00000447124 KCNE4Q8WWG9 221 aa20.64■□□□□ 0.89
SDC1-205ENST00000447124 ZNF830Q96NB3 372 aaPredicted RBP20.64■□□□□ 0.89
SDC1-205ENST00000447124 FCRL3Q96P31 734 aaPredicted RBP20.64■□□□□ 0.89
SDC1-205ENST00000447124 MLPHQ9BV36 600 aaPredicted RBP20.64■□□□□ 0.89
SDC1-205ENST00000447124 TMX2-CTNND1H3BSU7 103 aa20.63■□□□□ 0.89
SDC1-205ENST00000447124 INPP4BO15327 924 aa20.63■□□□□ 0.89
SDC1-205ENST00000447124 KLK10O43240 276 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms