RNA–Protein interactions for RNA: ENST00000445357.1

NCLP1-201, Transcript of nucleolin pseudogene 1, humanhuman

BASIC

Gene NCLP1, Length 1,963 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP1-201ENST00000445357 PPP2R3CQ969Q6 453 aa14.1□□□□□ -0.15
NCLP1-201ENST00000445357 WBP2Q969T9 261 aa14.1□□□□□ -0.15
NCLP1-201ENST00000445357 MRPL1Q9BYD6 325 aaKnown RBP14.1□□□□□ -0.15
NCLP1-201ENST00000445357 KLHL4Q9C0H6 718 aa14.1□□□□□ -0.15
NCLP1-201ENST00000445357 RNF38Q9H0F5 515 aa14.1□□□□□ -0.15
NCLP1-201ENST00000445357 TAS2R13Q9NYV9 303 aa14.1□□□□□ -0.15
NCLP1-201ENST00000445357 C6orf203Q9P0P8 240 aaPredicted RBP14.1□□□□□ -0.15
NCLP1-201ENST00000445357 OAS3Q9Y6K5 1087 aaKnown RBP14.1□□□□□ -0.15
NCLP1-201ENST00000445357 LTBP2Q14767 1821 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 UBA6A0AVT1 1052 aaPredicted RBP14.09□□□□□ -0.15
NCLP1-201ENST00000445357 MAGEA13PA6NCF6 341 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 UBXN8O00124 270 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 FKTNO75072 461 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 CDK14O94921 469 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 CD160O95971 181 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 PLD1Q13393 1074 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 PPP1R3AQ16821 1122 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 RNF219Q5W0B1 726 aaPredicted RBP14.09□□□□□ -0.15
NCLP1-201ENST00000445357 CLEC6AQ6EIG7 209 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 ZFP1Q6P2D0 407 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 HERC6Q8IVU3 1022 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 MFN1Q8IWA4 741 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 PLCD3Q8N3E9 789 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 RYBPQ8N488 228 aaPredicted RBP14.09□□□□□ -0.15
NCLP1-201ENST00000445357 STAG3L4Q8TBR4 150 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 GDPD5Q8WTR4 605 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 DLG3Q92796 817 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 C19orf60Q96EN9 201 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 NPAS2Q99743 824 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 ADGRE3Q9BY15 652 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 MUC3BQ9H195 1237 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 CCDC68Q9H2F9 335 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 VCXQ9H320 206 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 HIPK3Q9H422 1215 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 PACSIN3Q9UKS6 424 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 DENND4CQ5VZ89 1909 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 C2orf78A6NCI8 922 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 ANKRD66B4E2M5 251 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 H7C0S8 307 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 GPC4O75487 556 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 NDUFS3O75489 264 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 BCAS2O75934 225 aaPredicted RBP14.09□□□□□ -0.15
NCLP1-201ENST00000445357 SRP72O76094 671 aaKnown RBP14.09□□□□□ -0.15
NCLP1-201ENST00000445357 TMCC1O94876 653 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 ARSAP15289 507 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 ALDH1A3P47895 512 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 ACADVLP49748 655 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 PKNOX1P55347 436 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 RPL26P61254 145 aaKnown RBP14.09□□□□□ -0.15
NCLP1-201ENST00000445357 NAA20P61599 178 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 TRAF2Q12933 501 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 LRP8Q14114 963 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 OGFRL1Q5TC84 451 aaPredicted RBP14.09□□□□□ -0.15
NCLP1-201ENST00000445357 KANK2Q63ZY3 851 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 CAPRIN2Q6IMN6 1127 aaKnown RBP14.09□□□□□ -0.15
NCLP1-201ENST00000445357 TMEM154Q6P9G4 183 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 NCEH1Q6PIU2 408 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 PAQR3Q6TCH7 311 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 HACD2Q6Y1H2 254 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.09□□□□□ -0.15
NCLP1-201ENST00000445357 TMEM126BQ8IUX1 230 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 PQLC1Q8N2U9 271 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 TTC30BQ8N4P2 665 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 ZNF296Q8WUU4 475 aaPredicted RBP14.09□□□□□ -0.15
NCLP1-201ENST00000445357 EXT2Q93063 718 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 UNC93B1Q9H1C4 597 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 CACNA2D2Q9NY47 1150 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 HACD3Q9P035 362 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 LHX3Q9UBR4 397 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 PCDHGA7Q9Y5G6 932 aa14.09□□□□□ -0.15
NCLP1-201ENST00000445357 ZNF106Q9H2Y7 1883 aaKnown RBP14.08□□□□□ -0.16
NCLP1-201ENST00000445357 TRIM38O00635 465 aa14.08□□□□□ -0.16
NCLP1-201ENST00000445357 ACOT8O14734 319 aa14.08□□□□□ -0.16
NCLP1-201ENST00000445357 CFLARO15519 480 aa14.08□□□□□ -0.16
NCLP1-201ENST00000445357 KLK8O60259 260 aa14.08□□□□□ -0.16
NCLP1-201ENST00000445357 TSPAN3O60637 253 aa14.08□□□□□ -0.16
NCLP1-201ENST00000445357 SIX3O95343 332 aaPredicted RBP14.08□□□□□ -0.16
NCLP1-201ENST00000445357 IRF1P10914 325 aa14.08□□□□□ -0.16
NCLP1-201ENST00000445357 PEX2P28328 305 aa14.08□□□□□ -0.16
NCLP1-201ENST00000445357 FMO4P31512 558 aa14.08□□□□□ -0.16
NCLP1-201ENST00000445357 TTPAP49638 278 aa14.08□□□□□ -0.16
NCLP1-201ENST00000445357 CDH13P55290 713 aa14.08□□□□□ -0.16
NCLP1-201ENST00000445357 CCL23P55773 120 aa14.08□□□□□ -0.16
NCLP1-201ENST00000445357 PSME3P61289 254 aa14.08□□□□□ -0.16
NCLP1-201ENST00000445357 SH3BP2P78314 561 aa14.08□□□□□ -0.16
NCLP1-201ENST00000445357 RAD51Q06609 339 aa14.08□□□□□ -0.16
NCLP1-201ENST00000445357 PFKFB4Q16877 469 aa14.08□□□□□ -0.16
NCLP1-201ENST00000445357 AGKQ53H12 422 aa14.08□□□□□ -0.16
NCLP1-201ENST00000445357 INO80DQ53TQ3 878 aaPredicted RBP14.08□□□□□ -0.16
NCLP1-201ENST00000445357 LPCAT4Q643R3 524 aa14.08□□□□□ -0.16
NCLP1-201ENST00000445357 REP15Q6BDI9 236 aa14.08□□□□□ -0.16
NCLP1-201ENST00000445357 C16orf59Q7L2K0 433 aa14.08□□□□□ -0.16
NCLP1-201ENST00000445357 ANKRD33Q7Z3H0 272 aa14.08□□□□□ -0.16
NCLP1-201ENST00000445357 USP13Q92995 863 aaPredicted RBP14.08□□□□□ -0.16
NCLP1-201ENST00000445357 TMA16Q96EY4 203 aaKnown RBP14.08□□□□□ -0.16
NCLP1-201ENST00000445357 ZFRQ96KR1 1074 aaKnown RBP14.08□□□□□ -0.16
NCLP1-201ENST00000445357 BIRC8Q96P09 236 aa14.08□□□□□ -0.16
NCLP1-201ENST00000445357 ZBED2Q9BTP6 218 aa14.08□□□□□ -0.16
NCLP1-201ENST00000445357 SLC25A23Q9BV35 468 aa14.08□□□□□ -0.16
NCLP1-201ENST00000445357 HERC2P3Q9BVR0 1158 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms