RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 TMEM98Q9Y2Y6 226 aa10.84□□□□□ -0.67
SF3A1-203ENST00000444440 REXO2Q9Y3B8 237 aaKnown RBP10.84□□□□□ -0.67
SF3A1-203ENST00000444440 ALG6Q9Y672 507 aa10.84□□□□□ -0.67
SF3A1-203ENST00000444440 OAS3Q9Y6K5 1087 aaKnown RBP10.84□□□□□ -0.67
SF3A1-203ENST00000444440 RNF215Q9Y6U7 377 aa10.84□□□□□ -0.67
SF3A1-203ENST00000444440 PIKFYVEQ9Y2I7 2098 aa10.83□□□□□ -0.68
SF3A1-203ENST00000444440 SOWAHDA6NJG2 315 aa10.83□□□□□ -0.68
SF3A1-203ENST00000444440 FADS2P1A8MWK0 482 aa10.83□□□□□ -0.68
SF3A1-203ENST00000444440 APOL1O14791 398 aa10.83□□□□□ -0.68
SF3A1-203ENST00000444440 INPP4BO15327 924 aa10.83□□□□□ -0.68
SF3A1-203ENST00000444440 MT-CYBP00156 380 aaPredicted RBP10.83□□□□□ -0.68
SF3A1-203ENST00000444440 PIRTP0C851 137 aa10.83□□□□□ -0.68
SF3A1-203ENST00000444440 MX2P20592 715 aa10.83□□□□□ -0.68
SF3A1-203ENST00000444440 CD68P34810 354 aaPredicted RBP10.83□□□□□ -0.68
SF3A1-203ENST00000444440 MAGEA1P43355 309 aa10.83□□□□□ -0.68
SF3A1-203ENST00000444440 GNPDA1P46926 289 aa10.83□□□□□ -0.68
SF3A1-203ENST00000444440 RPIAP49247 311 aa10.83□□□□□ -0.68
SF3A1-203ENST00000444440 EPHB1P54762 984 aa10.83□□□□□ -0.68
SF3A1-203ENST00000444440 HADHBP55084 474 aaKnown RBP10.83□□□□□ -0.68
SF3A1-203ENST00000444440 HLTFQ14527 1009 aaKnown RBP eCLIP10.83□□□□□ -0.68
SF3A1-203ENST00000444440 LRRC38Q5VT99 294 aa10.83□□□□□ -0.68
SF3A1-203ENST00000444440 RBM44Q6ZP01 1051 aaKnown RBP10.83□□□□□ -0.68
SF3A1-203ENST00000444440 KDELC2Q7Z4H8 507 aa10.83□□□□□ -0.68
SF3A1-203ENST00000444440 RHOT1Q8IXI2 618 aa10.83□□□□□ -0.68
SF3A1-203ENST00000444440 CCDC170Q8IYT3 715 aa10.83□□□□□ -0.68
SF3A1-203ENST00000444440 FAM46DQ8NEK8 389 aa10.83□□□□□ -0.68
SF3A1-203ENST00000444440 ATL2Q8NHH9 583 aa10.83□□□□□ -0.68
SF3A1-203ENST00000444440 SPATA22Q8NHS9 363 aa10.83□□□□□ -0.68
SF3A1-203ENST00000444440 KRT35Q92764 455 aa10.83□□□□□ -0.68
SF3A1-203ENST00000444440 GLMNQ92990 594 aa10.83□□□□□ -0.68
SF3A1-203ENST00000444440 NAT6Q93015 286 aa10.83□□□□□ -0.68
SF3A1-203ENST00000444440 AP2M1Q96CW1 435 aa10.83□□□□□ -0.68
SF3A1-203ENST00000444440 IMP4Q96G21 291 aaKnown RBP10.83□□□□□ -0.68
SF3A1-203ENST00000444440 NAF1Q96HR8 494 aaKnown RBP10.83□□□□□ -0.68
SF3A1-203ENST00000444440 COX14Q96I36 57 aa10.83□□□□□ -0.68
SF3A1-203ENST00000444440 HIC2Q96JB3 615 aa10.83□□□□□ -0.68
SF3A1-203ENST00000444440 AGAP3Q96P47 875 aa10.83□□□□□ -0.68
SF3A1-203ENST00000444440 BBC3Q96PG8 261 aaPredicted RBP10.83□□□□□ -0.68
SF3A1-203ENST00000444440 PANX2Q96RD6 677 aa10.83□□□□□ -0.68
SF3A1-203ENST00000444440 LYSMD1Q96S90 227 aa10.83□□□□□ -0.68
SF3A1-203ENST00000444440 HERPUD2Q9BSE4 406 aa10.83□□□□□ -0.68
SF3A1-203ENST00000444440 RIOK2Q9BVS4 552 aaKnown RBP10.83□□□□□ -0.68
SF3A1-203ENST00000444440 FOXP3Q9BZS1 431 aa10.83□□□□□ -0.68
SF3A1-203ENST00000444440 PHPT1Q9NRX4 125 aaPredicted RBP10.83□□□□□ -0.68
SF3A1-203ENST00000444440 EVA1BQ9NVM1 165 aa10.83□□□□□ -0.68
SF3A1-203ENST00000444440 NCKIPSDQ9NZQ3 722 aa10.83□□□□□ -0.68
SF3A1-203ENST00000444440 ATXN7L1Q9ULK2 861 aaPredicted RBP10.83□□□□□ -0.68
SF3A1-203ENST00000444440 CNOT6Q9ULM6 557 aaKnown RBP10.83□□□□□ -0.68
SF3A1-203ENST00000444440 SLC17A4Q9Y2C5 497 aa10.83□□□□□ -0.68
SF3A1-203ENST00000444440 PCDHA13Q9Y5I0 950 aa10.83□□□□□ -0.68
SF3A1-203ENST00000444440 A0A0U1RQJ8 604 aa10.82□□□□□ -0.68
SF3A1-203ENST00000444440 ANKRD66B4E2M5 251 aa10.82□□□□□ -0.68
SF3A1-203ENST00000444440 D6RAR5 112 aa10.82□□□□□ -0.68
SF3A1-203ENST00000444440 SPOPO43791 374 aa10.82□□□□□ -0.68
SF3A1-203ENST00000444440 TCEA3O75764 348 aa10.82□□□□□ -0.68
SF3A1-203ENST00000444440 DXOO77932 396 aaKnown RBP10.82□□□□□ -0.68
SF3A1-203ENST00000444440 EML2O95834 649 aa10.82□□□□□ -0.68
SF3A1-203ENST00000444440 ATP1A1P05023 1023 aaKnown RBP10.82□□□□□ -0.68
SF3A1-203ENST00000444440 FGF1P05230 155 aa10.82□□□□□ -0.68
SF3A1-203ENST00000444440 RPLP0P05388 317 aaKnown RBP10.82□□□□□ -0.68
SF3A1-203ENST00000444440 ZNF30P17039 623 aa10.82□□□□□ -0.68
SF3A1-203ENST00000444440 FECHP22830 423 aa10.82□□□□□ -0.68
SF3A1-203ENST00000444440 KELP23276 732 aa10.82□□□□□ -0.68
SF3A1-203ENST00000444440 PTPN3P26045 913 aa10.82□□□□□ -0.68
SF3A1-203ENST00000444440 TEAD1P28347 426 aa10.82□□□□□ -0.68
SF3A1-203ENST00000444440 CYLC1P35663 651 aaPredicted RBP10.82□□□□□ -0.68
SF3A1-203ENST00000444440 ADCY8P40145 1251 aa10.82□□□□□ -0.68
SF3A1-203ENST00000444440 SLC1A1P43005 524 aa10.82□□□□□ -0.68
SF3A1-203ENST00000444440 GPR1P46091 355 aa10.82□□□□□ -0.68
SF3A1-203ENST00000444440 LSSP48449 732 aa10.82□□□□□ -0.68
SF3A1-203ENST00000444440 SPINT3P49223 89 aa10.82□□□□□ -0.68
SF3A1-203ENST00000444440 CTBSQ01459 385 aa10.82□□□□□ -0.68
SF3A1-203ENST00000444440 CCDC173Q0VFZ6 552 aa10.82□□□□□ -0.68
SF3A1-203ENST00000444440 WASHC5Q12768 1159 aa10.82□□□□□ -0.68
SF3A1-203ENST00000444440 SPIDRQ14159 915 aa10.82□□□□□ -0.68
SF3A1-203ENST00000444440 PRKD1Q15139 912 aaPredicted RBP10.82□□□□□ -0.68
SF3A1-203ENST00000444440 NOMO1Q15155 1222 aa10.82□□□□□ -0.68
SF3A1-203ENST00000444440 SPA17Q15506 151 aa10.82□□□□□ -0.68
SF3A1-203ENST00000444440 C14orf28Q4W4Y0 310 aa10.82□□□□□ -0.68
SF3A1-203ENST00000444440 CERCAMQ5T4B2 595 aa10.82□□□□□ -0.68
SF3A1-203ENST00000444440 HENMT1Q5T8I9 393 aaKnown RBP10.82□□□□□ -0.68
SF3A1-203ENST00000444440 KAZNQ674X7 775 aa10.82□□□□□ -0.68
SF3A1-203ENST00000444440 ADAMTSL4Q6UY14 1074 aa10.82□□□□□ -0.68
SF3A1-203ENST00000444440 RAD9BQ6WBX8 426 aa10.82□□□□□ -0.68
SF3A1-203ENST00000444440 SPOCD1Q6ZMY3 1216 aa10.82□□□□□ -0.68
SF3A1-203ENST00000444440 MARK2Q7KZI7 788 aaKnown RBP10.82□□□□□ -0.68
SF3A1-203ENST00000444440 ZNF765Q7L2R6 523 aa10.82□□□□□ -0.68
SF3A1-203ENST00000444440 LYSMD3Q7Z3D4 306 aa10.82□□□□□ -0.68
SF3A1-203ENST00000444440 C17orf82Q86X59 251 aaPredicted RBP10.82□□□□□ -0.68
SF3A1-203ENST00000444440 Q8N9G6 341 aaPredicted RBP10.82□□□□□ -0.68
SF3A1-203ENST00000444440 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.82□□□□□ -0.68
SF3A1-203ENST00000444440 FGF11Q92914 225 aa10.82□□□□□ -0.68
SF3A1-203ENST00000444440 HAUS1Q96CS2 278 aa10.82□□□□□ -0.68
SF3A1-203ENST00000444440 SCARF2Q96GP6 870 aaPredicted RBP10.82□□□□□ -0.68
SF3A1-203ENST00000444440 C10orf88Q9H8K7 445 aa10.82□□□□□ -0.68
SF3A1-203ENST00000444440 POLR1BQ9H9Y6 1135 aa10.82□□□□□ -0.68
SF3A1-203ENST00000444440 ARFGAP3Q9NP61 516 aa10.82□□□□□ -0.68
SF3A1-203ENST00000444440 SEPT10Q9P0V9 454 aa10.82□□□□□ -0.68
SF3A1-203ENST00000444440 TAAR2Q9P1P5 351 aa10.82□□□□□ -0.68
SF3A1-203ENST00000444440 DUSP10Q9Y6W6 482 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms