RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 METTL6Q8TCB7 284 aa4.29□□□□□ -1.72
AC003001.1-201ENST00000443247 SLC20A1Q8WUM9 679 aa4.29□□□□□ -1.72
AC003001.1-201ENST00000443247 EPYCQ99645 322 aa4.29□□□□□ -1.72
AC003001.1-201ENST00000443247 C1QTNF5Q9BXJ0 243 aa4.29□□□□□ -1.72
AC003001.1-201ENST00000443247 JMJD4Q9H9V9 463 aa4.29□□□□□ -1.72
AC003001.1-201ENST00000443247 PADI1Q9ULC6 663 aa4.29□□□□□ -1.72
AC003001.1-201ENST00000443247 LOXL2Q9Y4K0 774 aa4.29□□□□□ -1.72
AC003001.1-201ENST00000443247 ARID4BQ4LE39 1312 aaPredicted RBP4.28□□□□□ -1.72
AC003001.1-201ENST00000443247 A0A0B4J293 547 aa4.28□□□□□ -1.72
AC003001.1-201ENST00000443247 A0A1W2PPH5 198 aa4.28□□□□□ -1.72
AC003001.1-201ENST00000443247 PLEKHD1A6NEE1 506 aa4.28□□□□□ -1.72
AC003001.1-201ENST00000443247 NPIPB15A6NHN6 443 aaPredicted RBP4.28□□□□□ -1.72
AC003001.1-201ENST00000443247 LMX1BO60663 402 aa4.28□□□□□ -1.72
AC003001.1-201ENST00000443247 EGFP01133 1207 aa4.28□□□□□ -1.72
AC003001.1-201ENST00000443247 UBL4AP11441 157 aa4.28□□□□□ -1.72
AC003001.1-201ENST00000443247 CDH1P12830 882 aa4.28□□□□□ -1.72
AC003001.1-201ENST00000443247 ITGA2P17301 1181 aa4.28□□□□□ -1.72
AC003001.1-201ENST00000443247 CORO1AP31146 461 aaKnown RBP4.28□□□□□ -1.72
AC003001.1-201ENST00000443247 ICAM3P32942 547 aa4.28□□□□□ -1.72
AC003001.1-201ENST00000443247 GNL1P36915 607 aaPredicted RBP4.28□□□□□ -1.72
AC003001.1-201ENST00000443247 IL15P40933 162 aaPredicted RBP4.28□□□□□ -1.72
AC003001.1-201ENST00000443247 RGS19P49795 217 aa4.28□□□□□ -1.72
AC003001.1-201ENST00000443247 CASP6P55212 293 aa4.28□□□□□ -1.72
AC003001.1-201ENST00000443247 CSNK2A1P68400 391 aaPredicted RBP4.28□□□□□ -1.72
AC003001.1-201ENST00000443247 CXorf66Q5JRM2 361 aaPredicted RBP4.28□□□□□ -1.72
AC003001.1-201ENST00000443247 GPATCH4Q5T3I0 446 aaKnown RBP4.28□□□□□ -1.72
AC003001.1-201ENST00000443247 ZNF280DQ6N043 979 aa4.28□□□□□ -1.72
AC003001.1-201ENST00000443247 TSSK4Q6SA08 328 aa4.28□□□□□ -1.72
AC003001.1-201ENST00000443247 ATF7IPQ6VMQ6 1270 aa4.28□□□□□ -1.72
AC003001.1-201ENST00000443247 GDPD4Q6W3E5 623 aa4.28□□□□□ -1.72
AC003001.1-201ENST00000443247 DSTYKQ6XUX3 929 aa4.28□□□□□ -1.72
AC003001.1-201ENST00000443247 DPPA4Q7L190 304 aa4.28□□□□□ -1.72
AC003001.1-201ENST00000443247 GSTA5Q7RTV2 222 aa4.28□□□□□ -1.72
AC003001.1-201ENST00000443247 PCDH20Q8N6Y1 951 aaKnown RBP4.28□□□□□ -1.72
AC003001.1-201ENST00000443247 LMNTD1Q8N9Z9 388 aa4.28□□□□□ -1.72
AC003001.1-201ENST00000443247 CSNK2A3Q8NEV1 391 aa4.28□□□□□ -1.72
AC003001.1-201ENST00000443247 IL17REQ8NFR9 667 aa4.28□□□□□ -1.72
AC003001.1-201ENST00000443247 ABTB1Q969K4 478 aaPredicted RBP4.28□□□□□ -1.72
AC003001.1-201ENST00000443247 ORAI1Q96D31 301 aa4.28□□□□□ -1.72
AC003001.1-201ENST00000443247 GRAMD2BQ96HH9 432 aa4.28□□□□□ -1.72
AC003001.1-201ENST00000443247 SEC62Q99442 399 aaKnown RBP4.28□□□□□ -1.72
AC003001.1-201ENST00000443247 MTERF1Q99551 399 aaKnown RBP4.28□□□□□ -1.72
AC003001.1-201ENST00000443247 SLC28A3Q9HAS3 691 aa4.28□□□□□ -1.72
AC003001.1-201ENST00000443247 SEBOXQ9HB31 216 aaPredicted RBP4.28□□□□□ -1.72
AC003001.1-201ENST00000443247 SDF2L1Q9HCN8 221 aa4.28□□□□□ -1.72
AC003001.1-201ENST00000443247 ABI3Q9P2A4 366 aa4.28□□□□□ -1.72
AC003001.1-201ENST00000443247 PGAP2Q9UHJ9 254 aa4.28□□□□□ -1.72
AC003001.1-201ENST00000443247 ZNF711Q9Y462 761 aa4.28□□□□□ -1.72
AC003001.1-201ENST00000443247 TGFB1I1O43294 461 aa4.27□□□□□ -1.73
AC003001.1-201ENST00000443247 SEC14L2O76054 403 aa4.27□□□□□ -1.73
AC003001.1-201ENST00000443247 NKX2-2O95096 273 aa4.27□□□□□ -1.73
AC003001.1-201ENST00000443247 USP8P40818 1118 aa4.27□□□□□ -1.73
AC003001.1-201ENST00000443247 CLCN3P51790 818 aa4.27□□□□□ -1.73
AC003001.1-201ENST00000443247 PDE1BQ01064 536 aa4.27□□□□□ -1.73
AC003001.1-201ENST00000443247 FOXM1Q08050 763 aa4.27□□□□□ -1.73
AC003001.1-201ENST00000443247 OLIG2Q13516 323 aa4.27□□□□□ -1.73
AC003001.1-201ENST00000443247 FRG1Q14331 258 aaKnown RBP4.27□□□□□ -1.73
AC003001.1-201ENST00000443247 SYT16Q17RD7 645 aa4.27□□□□□ -1.73
AC003001.1-201ENST00000443247 GFI1BQ5VTD9 330 aa4.27□□□□□ -1.73
AC003001.1-201ENST00000443247 SIGIRRQ6IA17 410 aa4.27□□□□□ -1.73
AC003001.1-201ENST00000443247 MEX3BQ6ZN04 569 aaKnown RBP4.27□□□□□ -1.73
AC003001.1-201ENST00000443247 RNF113BQ8IZP6 322 aaKnown RBP4.27□□□□□ -1.73
AC003001.1-201ENST00000443247 C1orf87Q8N0U7 546 aa4.27□□□□□ -1.73
AC003001.1-201ENST00000443247 HMGCLL1Q8TB92 370 aa4.27□□□□□ -1.73
AC003001.1-201ENST00000443247 CDCA5Q96FF9 252 aa4.27□□□□□ -1.73
AC003001.1-201ENST00000443247 PCYT2Q99447 389 aa4.27□□□□□ -1.73
AC003001.1-201ENST00000443247 PCGF1Q9BSM1 259 aa4.27□□□□□ -1.73
AC003001.1-201ENST00000443247 PLEKHA5Q9HAU0 1116 aa4.27□□□□□ -1.73
AC003001.1-201ENST00000443247 KLHL1Q9NR64 748 aa4.27□□□□□ -1.73
AC003001.1-201ENST00000443247 ACSS1Q9NUB1 689 aaPredicted RBP4.27□□□□□ -1.73
AC003001.1-201ENST00000443247 ABCF3Q9NUQ8 709 aa4.27□□□□□ -1.73
AC003001.1-201ENST00000443247 TMEM30AQ9NV96 361 aa4.27□□□□□ -1.73
AC003001.1-201ENST00000443247 POU2F3Q9UKI9 436 aa4.27□□□□□ -1.73
AC003001.1-201ENST00000443247 RALYQ9UKM9 306 aaKnown RBP4.27□□□□□ -1.73
AC003001.1-201ENST00000443247 FAM237AA0A1B0GTK4 181 aa4.26□□□□□ -1.73
AC003001.1-201ENST00000443247 C16orf97H3BN30 126 aa4.26□□□□□ -1.73
AC003001.1-201ENST00000443247 CRYAAP02489 173 aa4.26□□□□□ -1.73
AC003001.1-201ENST00000443247 CETPP11597 493 aa4.26□□□□□ -1.73
AC003001.1-201ENST00000443247 MYOD1P15172 320 aa4.26□□□□□ -1.73
AC003001.1-201ENST00000443247 ZNF182P17025 639 aaPredicted RBP4.26□□□□□ -1.73
AC003001.1-201ENST00000443247 F2RL1P55085 397 aa4.26□□□□□ -1.73
AC003001.1-201ENST00000443247 ISL1P61371 349 aa4.26□□□□□ -1.73
AC003001.1-201ENST00000443247 RPL7AP62424 266 aaKnown RBP4.26□□□□□ -1.73
AC003001.1-201ENST00000443247 OLR1P78380 273 aa4.26□□□□□ -1.73
AC003001.1-201ENST00000443247 TMEM115Q12893 351 aaPredicted RBP4.26□□□□□ -1.73
AC003001.1-201ENST00000443247 DCTN2Q13561 401 aaKnown RBP4.26□□□□□ -1.73
AC003001.1-201ENST00000443247 RBBP5Q15291 538 aaKnown RBP4.26□□□□□ -1.73
AC003001.1-201ENST00000443247 CCDC96Q2M329 555 aa4.26□□□□□ -1.73
AC003001.1-201ENST00000443247 KRTAP24-1Q3LI83 254 aa4.26□□□□□ -1.73
AC003001.1-201ENST00000443247 ALFQ53S48 1182 aa4.26□□□□□ -1.73
AC003001.1-201ENST00000443247 INTS11Q5TA45 600 aaKnown RBP4.26□□□□□ -1.73
AC003001.1-201ENST00000443247 FRG2Q64ET8 278 aa4.26□□□□□ -1.73
AC003001.1-201ENST00000443247 MMS22LQ6ZRQ5 1243 aa4.26□□□□□ -1.73
AC003001.1-201ENST00000443247 CACNA2D4Q7Z3S7 1137 aa4.26□□□□□ -1.73
AC003001.1-201ENST00000443247 DSG4Q86SJ6 1040 aa4.26□□□□□ -1.73
AC003001.1-201ENST00000443247 KMT5CQ86Y97 462 aa4.26□□□□□ -1.73
AC003001.1-201ENST00000443247 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.26□□□□□ -1.73
AC003001.1-201ENST00000443247 BEST3Q8N1M1 668 aa4.26□□□□□ -1.73
AC003001.1-201ENST00000443247 NR4A3Q92570 626 aa4.26□□□□□ -1.73
AC003001.1-201ENST00000443247 SMARCE1Q969G3 411 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms