RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 APPL1Q9UKG1 709 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 CCL26Q9Y258 94 aa13.14□□□□□ -0.31
CPSF4-206ENST00000441580 OAS3Q9Y6K5 1087 aaKnown RBP13.14□□□□□ -0.31
CPSF4-206ENST00000441580 GOLGA8QA0A0J9YX86 632 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 GOLGA8OA6NCC3 632 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 TRPC5OSA6NMA1 111 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 CAPN14A8MX76 684 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 NEDD8-MDP1E9PL57 170 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 GOLGA8NF8WBI6 632 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 K7ERQ8 282 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 MATN2O00339 956 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 SLC22A2O15244 555 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 MGRN1O60291 552 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 DIAPH2O60879 1101 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 KERAO60938 352 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 MT-CO1P00395 513 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 T-ENOLP0DO92 83 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 ESRRAP11474 423 aaPredicted RBP13.13□□□□□ -0.31
CPSF4-206ENST00000441580 PKMP14618 531 aaKnown RBP13.13□□□□□ -0.31
CPSF4-206ENST00000441580 MPSTP25325 297 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 NFKBIAP25963 317 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 WEE1P30291 646 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 IRS1P35568 1242 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 IDH3AP50213 366 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 MNAT1P51948 309 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 NAGLUP54802 743 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 PTPN5P54829 565 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 SATB1Q01826 763 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 SNCBQ16143 134 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 DNAL1Q4LDG9 190 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 ZRANB3Q5FWF4 1079 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 ZDHHC20Q5W0Z9 365 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 EPGNQ6UW88 154 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 TRIM67Q6ZTA4 783 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 FRMD7Q6ZUT3 714 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 PARP9Q8IXQ6 854 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 RYBPQ8N488 228 aaPredicted RBP13.13□□□□□ -0.31
CPSF4-206ENST00000441580 GRIN3AQ8TCU5 1115 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 WFIKKN2Q8TEU8 576 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 IRF7Q92985 503 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 SLC7A6OSQ96CW6 309 aaPredicted RBP13.13□□□□□ -0.31
CPSF4-206ENST00000441580 L3HYPDHQ96EM0 354 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 ASB2Q96Q27 587 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 EBF4Q9BQW3 602 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 CCDC28BQ9BUN5 200 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 CPEB1Q9BZB8 566 aaKnown RBP13.13□□□□□ -0.31
CPSF4-206ENST00000441580 LMAN2LQ9H0V9 348 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 MMADHCQ9H3L0 296 aaPredicted RBP13.13□□□□□ -0.31
CPSF4-206ENST00000441580 ARL8BQ9NVJ2 186 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 PCDH10Q9P2E7 1040 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 TRMT6Q9UJA5 497 aaKnown RBP13.13□□□□□ -0.31
CPSF4-206ENST00000441580 INTS6Q9UL03 887 aaKnown RBP13.13□□□□□ -0.31
CPSF4-206ENST00000441580 CDYLQ9Y232 598 aa13.13□□□□□ -0.31
CPSF4-206ENST00000441580 BRCA2P51587 3418 aa13.12□□□□□ -0.31
CPSF4-206ENST00000441580 C1orf232A0A0U1RR37 186 aa13.12□□□□□ -0.31
CPSF4-206ENST00000441580 SYCE1LA8MT33 242 aa13.12□□□□□ -0.31
CPSF4-206ENST00000441580 SPECC1L-ADORA2AF8WAN1 911 aa13.12□□□□□ -0.31
CPSF4-206ENST00000441580 H3BMM5 538 aa13.12□□□□□ -0.31
CPSF4-206ENST00000441580 ZNF195O14628 629 aa13.12□□□□□ -0.31
CPSF4-206ENST00000441580 SMAD6O43541 496 aaKnown RBP13.12□□□□□ -0.31
CPSF4-206ENST00000441580 PAPLNO95428 1278 aa13.12□□□□□ -0.31
CPSF4-206ENST00000441580 CHRNGP07510 517 aa13.12□□□□□ -0.31
CPSF4-206ENST00000441580 KRT16P08779 473 aa13.12□□□□□ -0.31
CPSF4-206ENST00000441580 TPBGLP0DKB5 382 aa13.12□□□□□ -0.31
CPSF4-206ENST00000441580 TYRP14679 529 aa13.12□□□□□ -0.31
CPSF4-206ENST00000441580 SYN1P17600 705 aa13.12□□□□□ -0.31
CPSF4-206ENST00000441580 CEBPBP17676 345 aa13.12□□□□□ -0.31
CPSF4-206ENST00000441580 RPS3P23396 243 aaKnown RBP eCLIP13.12□□□□□ -0.31
CPSF4-206ENST00000441580 PRDX6P30041 224 aa13.12□□□□□ -0.31
CPSF4-206ENST00000441580 SLC8A1P32418 973 aa13.12□□□□□ -0.31
CPSF4-206ENST00000441580 SPAM1P38567 509 aa13.12□□□□□ -0.31
CPSF4-206ENST00000441580 VASPP50552 380 aaPredicted RBP13.12□□□□□ -0.31
CPSF4-206ENST00000441580 ALDH18A1P54886 795 aaKnown RBP13.12□□□□□ -0.31
CPSF4-206ENST00000441580 PEX6Q13608 980 aa13.12□□□□□ -0.31
CPSF4-206ENST00000441580 HSF5Q4G112 596 aaPredicted RBP13.12□□□□□ -0.31
CPSF4-206ENST00000441580 ARL13AQ5H913 290 aaPredicted RBP13.12□□□□□ -0.31
CPSF4-206ENST00000441580 GRAMD4Q6IC98 578 aa13.12□□□□□ -0.31
CPSF4-206ENST00000441580 PSAPL1Q6NUJ1 521 aa13.12□□□□□ -0.31
CPSF4-206ENST00000441580 PACS2Q86VP3 889 aa13.12□□□□□ -0.31
CPSF4-206ENST00000441580 CAMK1DQ8IU85 385 aa13.12□□□□□ -0.31
CPSF4-206ENST00000441580 PLPP6Q8IY26 295 aa13.12□□□□□ -0.31
CPSF4-206ENST00000441580 CBARPQ8N350 705 aaPredicted RBP13.12□□□□□ -0.31
CPSF4-206ENST00000441580 CELF5Q8N6W0 485 aaKnown RBP13.12□□□□□ -0.31
CPSF4-206ENST00000441580 CCNYL1Q8N7R7 359 aa13.12□□□□□ -0.31
CPSF4-206ENST00000441580 OR6K2Q8NGY2 324 aa13.12□□□□□ -0.31
CPSF4-206ENST00000441580 ANKRD49Q8WVL7 239 aa13.12□□□□□ -0.31
CPSF4-206ENST00000441580 ECHDC3Q96DC8 303 aa13.12□□□□□ -0.31
CPSF4-206ENST00000441580 ZNF641Q96N77 438 aaPredicted RBP13.12□□□□□ -0.31
CPSF4-206ENST00000441580 CCDC106Q9BWC9 280 aa13.12□□□□□ -0.31
CPSF4-206ENST00000441580 ALG9Q9H6U8 611 aa13.12□□□□□ -0.31
CPSF4-206ENST00000441580 SFXN1Q9H9B4 322 aa13.12□□□□□ -0.31
CPSF4-206ENST00000441580 COG4Q9H9E3 785 aa13.12□□□□□ -0.31
CPSF4-206ENST00000441580 ZFYVE1Q9HBF4 777 aa13.12□□□□□ -0.31
CPSF4-206ENST00000441580 TCF7L2Q9NQB0 619 aa13.12□□□□□ -0.31
CPSF4-206ENST00000441580 GNPTGQ9UJJ9 305 aa13.12□□□□□ -0.31
CPSF4-206ENST00000441580 CLEC4EQ9ULY5 219 aa13.12□□□□□ -0.31
CPSF4-206ENST00000441580 SLC8A2Q9UPR5 921 aa13.12□□□□□ -0.31
CPSF4-206ENST00000441580 MRPS23Q9Y3D9 190 aaKnown RBP13.12□□□□□ -0.31
CPSF4-206ENST00000441580 NUMBLQ9Y6R0 609 aa13.12□□□□□ -0.31
CPSF4-206ENST00000441580 KIF26AQ9ULI4 1882 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms