RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 JRKO75564 520 aa4.9□□□□□ -1.63
PFDN4-202ENST00000441080 EGFP01133 1207 aa4.9□□□□□ -1.63
PFDN4-202ENST00000441080 BDKRB2P30411 391 aa4.9□□□□□ -1.63
PFDN4-202ENST00000441080 HADHAP40939 763 aa4.9□□□□□ -1.63
PFDN4-202ENST00000441080 GALCP54803 685 aa4.9□□□□□ -1.63
PFDN4-202ENST00000441080 CDH8P55286 799 aa4.9□□□□□ -1.63
PFDN4-202ENST00000441080 HNRNPH2P55795 449 aaKnown RBP4.9□□□□□ -1.63
PFDN4-202ENST00000441080 DSCR9P59020 149 aa4.9□□□□□ -1.63
PFDN4-202ENST00000441080 SEC61BP60468 96 aaKnown RBP4.9□□□□□ -1.63
PFDN4-202ENST00000441080 CSNK2A1P68400 391 aaPredicted RBP4.9□□□□□ -1.63
PFDN4-202ENST00000441080 ECT2LQ008S8 904 aa4.9□□□□□ -1.63
PFDN4-202ENST00000441080 NFATC4Q14934 902 aa4.9□□□□□ -1.63
PFDN4-202ENST00000441080 OASLQ15646 514 aaKnown RBP4.9□□□□□ -1.63
PFDN4-202ENST00000441080 ZSCAN23Q3MJ62 389 aa4.9□□□□□ -1.63
PFDN4-202ENST00000441080 FAM205BPQ63HN1 556 aa4.9□□□□□ -1.63
PFDN4-202ENST00000441080 RHBDF2Q6PJF5 856 aa4.9□□□□□ -1.63
PFDN4-202ENST00000441080 TICAM1Q8IUC6 712 aa4.9□□□□□ -1.63
PFDN4-202ENST00000441080 TEX11Q8IYF3 940 aa4.9□□□□□ -1.63
PFDN4-202ENST00000441080 RNF168Q8IYW5 571 aaPredicted RBP4.9□□□□□ -1.63
PFDN4-202ENST00000441080 CSNK2A3Q8NEV1 391 aa4.9□□□□□ -1.63
PFDN4-202ENST00000441080 WFIKKN2Q8TEU8 576 aa4.9□□□□□ -1.63
PFDN4-202ENST00000441080 C3orf30Q96M34 536 aa4.9□□□□□ -1.63
PFDN4-202ENST00000441080 ACSS1Q9NUB1 689 aaPredicted RBP4.9□□□□□ -1.63
PFDN4-202ENST00000441080 HAUS2Q9NVX0 235 aa4.9□□□□□ -1.63
PFDN4-202ENST00000441080 MAP3K20Q9NYL2 800 aaKnown RBP4.9□□□□□ -1.63
PFDN4-202ENST00000441080 CWC15Q9P013 229 aaKnown RBP4.9□□□□□ -1.63
PFDN4-202ENST00000441080 R3HDM2Q9Y2K5 976 aaKnown RBP4.9□□□□□ -1.63
PFDN4-202ENST00000441080 EVPLQ92817 2033 aa4.9□□□□□ -1.63
PFDN4-202ENST00000441080 CKAP5Q14008 2032 aa4.89□□□□□ -1.63
PFDN4-202ENST00000441080 RUSC2Q8N2Y8 1516 aa4.89□□□□□ -1.63
PFDN4-202ENST00000441080 IGKV2D-30A0A075B6S6 120 aa4.89□□□□□ -1.63
PFDN4-202ENST00000441080 A6NCN8 305 aa4.89□□□□□ -1.63
PFDN4-202ENST00000441080 BTBD18B2RXH4 712 aa4.89□□□□□ -1.63
PFDN4-202ENST00000441080 H3BQ06 376 aaPredicted RBP4.89□□□□□ -1.63
PFDN4-202ENST00000441080 CLTBP09497 229 aa4.89□□□□□ -1.63
PFDN4-202ENST00000441080 SRCP12931 536 aa4.89□□□□□ -1.63
PFDN4-202ENST00000441080 PLA2G2AP14555 144 aa4.89□□□□□ -1.63
PFDN4-202ENST00000441080 TMEM11P17152 192 aa4.89□□□□□ -1.63
PFDN4-202ENST00000441080 UBA1P22314 1058 aaKnown RBP4.89□□□□□ -1.63
PFDN4-202ENST00000441080 MCM3P25205 808 aa4.89□□□□□ -1.63
PFDN4-202ENST00000441080 TNFRSF8P28908 595 aa4.89□□□□□ -1.63
PFDN4-202ENST00000441080 UBA7P41226 1012 aa4.89□□□□□ -1.63
PFDN4-202ENST00000441080 PDLIM4P50479 330 aa4.89□□□□□ -1.63
PFDN4-202ENST00000441080 CLCNKAP51800 687 aa4.89□□□□□ -1.63
PFDN4-202ENST00000441080 KRTAP10-11P60412 298 aa4.89□□□□□ -1.63
PFDN4-202ENST00000441080 TUBA1BP68363 451 aa4.89□□□□□ -1.63
PFDN4-202ENST00000441080 LRMPQ12912 555 aa4.89□□□□□ -1.63
PFDN4-202ENST00000441080 ASTE1Q2TB18 679 aaPredicted RBP4.89□□□□□ -1.63
PFDN4-202ENST00000441080 SETMARQ53H47 684 aaPredicted RBP4.89□□□□□ -1.63
PFDN4-202ENST00000441080 SOWAHCQ53LP3 525 aaPredicted RBP4.89□□□□□ -1.63
PFDN4-202ENST00000441080 DUS1LQ6P1R4 473 aaKnown RBP4.89□□□□□ -1.63
PFDN4-202ENST00000441080 ZNF517Q6ZMY9 492 aaPredicted RBP4.89□□□□□ -1.63
PFDN4-202ENST00000441080 KRBA2Q6ZNG9 492 aa4.89□□□□□ -1.63
PFDN4-202ENST00000441080 CHST9Q7L1S5 443 aa4.89□□□□□ -1.63
PFDN4-202ENST00000441080 C9orf106Q8NAJ2 232 aa4.89□□□□□ -1.63
PFDN4-202ENST00000441080 ZNF114Q8NC26 417 aa4.89□□□□□ -1.63
PFDN4-202ENST00000441080 ORAI1Q96D31 301 aa4.89□□□□□ -1.63
PFDN4-202ENST00000441080 ELMOD3Q96FG2 381 aa4.89□□□□□ -1.63
PFDN4-202ENST00000441080 SCMH1Q96GD3 660 aa4.89□□□□□ -1.63
PFDN4-202ENST00000441080 GRAMD2BQ96HH9 432 aa4.89□□□□□ -1.63
PFDN4-202ENST00000441080 SEPT5Q99719 369 aaPredicted RBP4.89□□□□□ -1.63
PFDN4-202ENST00000441080 SPRY4Q9C004 299 aa4.89□□□□□ -1.63
PFDN4-202ENST00000441080 IL25Q9H293 177 aa4.89□□□□□ -1.63
PFDN4-202ENST00000441080 GHITMQ9H3K2 345 aa4.89□□□□□ -1.63
PFDN4-202ENST00000441080 SMARCAD1Q9H4L7 1026 aa4.89□□□□□ -1.63
PFDN4-202ENST00000441080 LTB4R2Q9NPC1 389 aa4.89□□□□□ -1.63
PFDN4-202ENST00000441080 SELENONQ9NZV5 590 aa4.89□□□□□ -1.63
PFDN4-202ENST00000441080 CLIC4Q9Y696 253 aa4.89□□□□□ -1.63
PFDN4-202ENST00000441080 ATP2A1O14983 1001 aa4.88□□□□□ -1.63
PFDN4-202ENST00000441080 VILLO15195 856 aa4.88□□□□□ -1.63
PFDN4-202ENST00000441080 KCNAB3O43448 404 aa4.88□□□□□ -1.63
PFDN4-202ENST00000441080 RFPL2O75678 378 aa4.88□□□□□ -1.63
PFDN4-202ENST00000441080 KDM4BO94953 1096 aa4.88□□□□□ -1.63
PFDN4-202ENST00000441080 PAPSS2O95340 614 aaPredicted RBP4.88□□□□□ -1.63
PFDN4-202ENST00000441080 OR2C1O95371 312 aa4.88□□□□□ -1.63
PFDN4-202ENST00000441080 RB1P06400 928 aa4.88□□□□□ -1.63
PFDN4-202ENST00000441080 PRCPP42785 496 aa4.88□□□□□ -1.63
PFDN4-202ENST00000441080 TAS2R40P59535 323 aa4.88□□□□□ -1.63
PFDN4-202ENST00000441080 MRPS34P82930 218 aaKnown RBP4.88□□□□□ -1.63
PFDN4-202ENST00000441080 MC1RQ01726 317 aa4.88□□□□□ -1.63
PFDN4-202ENST00000441080 FOXM1Q08050 763 aa4.88□□□□□ -1.63
PFDN4-202ENST00000441080 ACSM2AQ08AH3 577 aa4.88□□□□□ -1.63
PFDN4-202ENST00000441080 GRIK2Q13002 908 aa4.88□□□□□ -1.63
PFDN4-202ENST00000441080 MEA1Q16626 185 aa4.88□□□□□ -1.63
PFDN4-202ENST00000441080 PNLIPRP3Q17RR3 467 aa4.88□□□□□ -1.63
PFDN4-202ENST00000441080 LRIF1Q5T3J3 769 aa4.88□□□□□ -1.63
PFDN4-202ENST00000441080 FRG2Q64ET8 278 aa4.88□□□□□ -1.63
PFDN4-202ENST00000441080 ACSM2BQ68CK6 577 aa4.88□□□□□ -1.63
PFDN4-202ENST00000441080 JADE1Q6IE81 842 aa4.88□□□□□ -1.63
PFDN4-202ENST00000441080 RGMBQ6NW40 437 aa4.88□□□□□ -1.63
PFDN4-202ENST00000441080 CCNI2Q6ZMN8 369 aaPredicted RBP4.88□□□□□ -1.63
PFDN4-202ENST00000441080 FASTKD5Q7L8L6 764 aaKnown RBP4.88□□□□□ -1.63
PFDN4-202ENST00000441080 ADHFE1Q8IWW8 467 aa4.88□□□□□ -1.63
PFDN4-202ENST00000441080 CHERPQ8IWX8 916 aaKnown RBP4.88□□□□□ -1.63
PFDN4-202ENST00000441080 ADGRF2Q8IZF7 708 aa4.88□□□□□ -1.63
PFDN4-202ENST00000441080 PCDH20Q8N6Y1 951 aaKnown RBP4.88□□□□□ -1.63
PFDN4-202ENST00000441080 OR2AK2Q8NG84 335 aa4.88□□□□□ -1.63
PFDN4-202ENST00000441080 NUDCD2Q8WVJ2 157 aa4.88□□□□□ -1.63
PFDN4-202ENST00000441080 RTP4Q96DX8 246 aa4.88□□□□□ -1.63
PFDN4-202ENST00000441080 PGAM5Q96HS1 289 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms