RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 LEMD2Q8NC56 503 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 CCNYQ8ND76 341 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 NXNL1Q96CM4 212 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 MRPL45Q9BRJ2 306 aaKnown RBP11.89□□□□□ -0.51
LTBR-203ENST00000441074 OSBPL2Q9H1P3 480 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 MRPL46Q9H2W6 279 aaKnown RBP11.89□□□□□ -0.51
LTBR-203ENST00000441074 AKIP1Q9NQ31 210 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 FAM49BQ9NUQ9 324 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 GMIPQ9P107 970 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 PCDH10Q9P2E7 1040 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 KLHL3Q9UH77 587 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 FZD10Q9ULW2 581 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 ST14Q9Y5Y6 855 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 SYNCRIPO60506 623 aaKnown RBP11.89□□□□□ -0.51
LTBR-203ENST00000441074 ADAMTS4O75173 837 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 SNAP29O95721 258 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 CHRNA1P02708 482 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 HNRNPLP14866 589 aaKnown RBP eCLIP11.89□□□□□ -0.51
LTBR-203ENST00000441074 ATP5F1P24539 256 aaPredicted RBP11.89□□□□□ -0.51
LTBR-203ENST00000441074 GSTM2P28161 218 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 RFC2P35250 354 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 AVPR1AP37288 418 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 SOX4Q06945 474 aaPredicted RBP11.89□□□□□ -0.51
LTBR-203ENST00000441074 PRPSAP1Q14558 356 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 LDLRAP1Q5SW96 308 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 UBXN11Q5T124 520 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 CERCAMQ5T4B2 595 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 TWF2Q6IBS0 349 aaKnown RBP11.89□□□□□ -0.51
LTBR-203ENST00000441074 ANKRD13BQ86YJ7 626 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 PYROXD2Q8N2H3 581 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 LRRC52Q8N7C0 313 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 S100ZQ8WXG8 99 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 LPPQ93052 612 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 ERLEC1Q96DZ1 483 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 OMDQ99983 421 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 HERC2P3Q9BVR0 1158 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 B3GNT5Q9BYG0 378 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 EHD1Q9H4M9 534 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 POMKQ9H5K3 350 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 PLEKHA5Q9HAU0 1116 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 EML4Q9HC35 981 aaKnown RBP11.89□□□□□ -0.51
LTBR-203ENST00000441074 INTS10Q9NVR2 710 aaKnown RBP11.89□□□□□ -0.51
LTBR-203ENST00000441074 SLC27A5Q9Y2P5 690 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 FIS1Q9Y3D6 152 aa11.89□□□□□ -0.51
LTBR-203ENST00000441074 RALGAPA2Q2PPJ7 1873 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 GABBR2O75899 941 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 GFAPP14136 432 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 ARSAP15289 507 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 OXTRP30559 389 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 PGGT1BP53609 377 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 RAD23AP54725 363 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 SPCS2Q15005 226 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 DCAF4L1Q3SXM0 396 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 SPATS1Q496A3 300 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 RETREG3Q86VR2 466 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 SLC41A1Q8IVJ1 513 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 FUNDC1Q8IVP5 155 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 MINDY1Q8N5J2 469 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 ARL10Q8N8L6 244 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 OR9I1Q8NGQ6 314 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 MAGEE2Q8TD90 523 aaPredicted RBP11.88□□□□□ -0.51
LTBR-203ENST00000441074 FKBP10Q96AY3 582 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 VMP1Q96GC9 406 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 HSFY1Q96LI6 401 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 MRPL57Q9BQC6 102 aaKnown RBP11.88□□□□□ -0.51
LTBR-203ENST00000441074 MCOLN1Q9GZU1 580 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 PRDM12Q9H4Q4 367 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 AGO3Q9H9G7 860 aaKnown RBP11.88□□□□□ -0.51
LTBR-203ENST00000441074 CHRAC1Q9NRG0 131 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 DNMT3BQ9UBC3 853 aaKnown RBP11.88□□□□□ -0.51
LTBR-203ENST00000441074 EGFL7Q9UHF1 273 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 ZNF639Q9UID6 485 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 RBMX2Q9Y388 322 aaKnown RBP11.88□□□□□ -0.51
LTBR-203ENST00000441074 Q9Y3F1 56 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 NME7Q9Y5B8 376 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 ERI2A8K979 691 aaKnown RBP11.88□□□□□ -0.51
LTBR-203ENST00000441074 TPD52L2O43399 206 aaKnown RBP11.88□□□□□ -0.51
LTBR-203ENST00000441074 BCAS1O75363 584 aaPredicted RBP11.88□□□□□ -0.51
LTBR-203ENST00000441074 MYO1DO94832 1006 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 AXLP30530 894 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 THPOP40225 353 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 MATKP42679 507 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 PLA2G16P53816 162 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 RAB10P61026 200 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 SELENBP1Q13228 472 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 C6orf183Q5T699 404 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 KCTD11Q693B1 232 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 DNAJC14Q6Y2X3 702 aaPredicted RBP11.88□□□□□ -0.51
LTBR-203ENST00000441074 PIGZQ86VD9 579 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 NETO2Q8NC67 525 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 SMG8Q8ND04 991 aaKnown RBP11.88□□□□□ -0.51
LTBR-203ENST00000441074 PAPD5Q8NDF8 572 aaKnown RBP11.88□□□□□ -0.51
LTBR-203ENST00000441074 RNF139Q8WU17 664 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.88□□□□□ -0.51
LTBR-203ENST00000441074 SOX17Q9H6I2 414 aaPredicted RBP11.88□□□□□ -0.51
LTBR-203ENST00000441074 MAP10Q9P2G4 905 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 KLHL8Q9P2G9 620 aaPredicted RBP11.88□□□□□ -0.51
LTBR-203ENST00000441074 VPS51Q9UID3 782 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 IFT52Q9Y366 437 aa11.88□□□□□ -0.51
LTBR-203ENST00000441074 NDUFAF1Q9Y375 327 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms