RNA–Protein interactions for RNA: ENST00000440612.5

CGREF1-207, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 3

Gene CGREF1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-207ENST00000440612 NEK3P51956 506 aa27.85■■■□□ 2.05
CGREF1-207ENST00000440612 GRSF1Q12849 480 aaKnown RBP eCLIP27.85■■■□□ 2.05
CGREF1-207ENST00000440612 E2F5Q15329 346 aa27.85■■■□□ 2.05
CGREF1-207ENST00000440612 SLC44A4Q53GD3 710 aa27.85■■■□□ 2.05
CGREF1-207ENST00000440612 FASTKD1Q53R41 847 aaKnown RBP27.85■■■□□ 2.05
CGREF1-207ENST00000440612 RBM20Q5T481 1227 aaKnown RBP27.85■■■□□ 2.05
CGREF1-207ENST00000440612 KIAA1211LQ6NV74 962 aa27.85■■■□□ 2.05
CGREF1-207ENST00000440612 OTUD6BQ8N6M0 293 aa27.85■■■□□ 2.05
CGREF1-207ENST00000440612 GABPB2Q8TAK5 448 aaPredicted RBP27.85■■■□□ 2.05
CGREF1-207ENST00000440612 ACMSDQ8TDX5 336 aa27.85■■■□□ 2.05
CGREF1-207ENST00000440612 SCG3Q8WXD2 468 aaKnown RBP27.85■■■□□ 2.05
CGREF1-207ENST00000440612 SNX15Q9NRS6 342 aa27.85■■■□□ 2.05
CGREF1-207ENST00000440612 MKS1Q9NXB0 559 aa27.85■■■□□ 2.05
CGREF1-207ENST00000440612 SMG5Q9UPR3 1016 aaKnown RBP27.85■■■□□ 2.05
CGREF1-207ENST00000440612 ITM2BQ9Y287 266 aa27.85■■■□□ 2.05
CGREF1-207ENST00000440612 FNDC3AQ9Y2H6 1198 aaKnown RBP27.85■■■□□ 2.05
CGREF1-207ENST00000440612 CYP2A6P11509 494 aaPredicted RBP27.84■■■□□ 2.05
CGREF1-207ENST00000440612 ZNF30P17039 623 aa27.84■■■□□ 2.05
CGREF1-207ENST00000440612 GUCY1A3Q02108 690 aa27.84■■■□□ 2.05
CGREF1-207ENST00000440612 PDE1CQ14123 709 aaPredicted RBP27.84■■■□□ 2.05
CGREF1-207ENST00000440612 PPM1JQ5JR12 505 aa27.84■■■□□ 2.05
CGREF1-207ENST00000440612 ZNF549Q6P9A3 640 aa27.84■■■□□ 2.05
CGREF1-207ENST00000440612 HSD11B1LQ7Z5J1 315 aa27.84■■■□□ 2.05
CGREF1-207ENST00000440612 DSG4Q86SJ6 1040 aa27.84■■■□□ 2.05
CGREF1-207ENST00000440612 PBXIP1Q96AQ6 731 aa27.84■■■□□ 2.05
CGREF1-207ENST00000440612 APOPT1Q96IL0 206 aa27.84■■■□□ 2.05
CGREF1-207ENST00000440612 FAM95CA0A1B0GW59 222 aa27.84■■■□□ 2.05
CGREF1-207ENST00000440612 A0A1W2PQF6 199 aa27.84■■■□□ 2.05
CGREF1-207ENST00000440612 SRP72O76094 671 aaKnown RBP27.84■■■□□ 2.05
CGREF1-207ENST00000440612 GMPRP36959 345 aa27.84■■■□□ 2.05
CGREF1-207ENST00000440612 MDH1P40925 334 aaKnown RBP27.84■■■□□ 2.05
CGREF1-207ENST00000440612 PSMD8P48556 350 aa27.84■■■□□ 2.05
CGREF1-207ENST00000440612 SPINT3P49223 89 aa27.84■■■□□ 2.05
CGREF1-207ENST00000440612 SERPINB8P50452 374 aa27.84■■■□□ 2.05
CGREF1-207ENST00000440612 PGGT1BP53609 377 aa27.84■■■□□ 2.05
CGREF1-207ENST00000440612 COPAP53621 1224 aa27.84■■■□□ 2.05
CGREF1-207ENST00000440612 CCINQ13939 588 aa27.84■■■□□ 2.05
CGREF1-207ENST00000440612 FAM151BQ6UXP7 276 aa27.84■■■□□ 2.05
CGREF1-207ENST00000440612 LPGAT1Q92604 370 aa27.84■■■□□ 2.05
CGREF1-207ENST00000440612 OMDQ99983 421 aa27.84■■■□□ 2.05
CGREF1-207ENST00000440612 HDAC8Q9BY41 377 aa27.84■■■□□ 2.05
CGREF1-207ENST00000440612 C12orf65Q9H3J6 166 aaKnown RBP27.84■■■□□ 2.05
CGREF1-207ENST00000440612 PCMTD2Q9NV79 361 aa27.84■■■□□ 2.05
CGREF1-207ENST00000440612 TOP3BO95985 862 aaKnown RBP27.83■■■□□ 2.05
CGREF1-207ENST00000440612 ADRB3P13945 408 aa27.83■■■□□ 2.05
CGREF1-207ENST00000440612 GM2AP17900 193 aa27.83■■■□□ 2.05
CGREF1-207ENST00000440612 SPAM1P38567 509 aa27.83■■■□□ 2.05
CGREF1-207ENST00000440612 PTPN5P54829 565 aa27.83■■■□□ 2.05
CGREF1-207ENST00000440612 SATB1Q01826 763 aa27.83■■■□□ 2.05
CGREF1-207ENST00000440612 CACNG1Q06432 222 aa27.83■■■□□ 2.05
CGREF1-207ENST00000440612 SDCCAG8Q86SQ7 713 aaPredicted RBP27.83■■■□□ 2.05
CGREF1-207ENST00000440612 ATXN2LQ8WWM7 1075 aaKnown RBP27.83■■■□□ 2.05
CGREF1-207ENST00000440612 MSANTD3Q96H12 275 aa27.83■■■□□ 2.05
CGREF1-207ENST00000440612 TCF12Q99081 682 aa27.83■■■□□ 2.05
CGREF1-207ENST00000440612 INTS10Q9NVR2 710 aaKnown RBP27.83■■■□□ 2.05
CGREF1-207ENST00000440612 SLC39A10Q9ULF5 831 aa27.83■■■□□ 2.05
CGREF1-207ENST00000440612 FAM50BQ9Y247 325 aa27.83■■■□□ 2.05
CGREF1-207ENST00000440612 TRBV5-4A0A0C4DH59 114 aa27.82■■■□□ 2.04
CGREF1-207ENST00000440612 AGAP14A8MT82 685 aa27.82■■■□□ 2.04
CGREF1-207ENST00000440612 C1QTNF3-AMACRE9PGA6 284 aa27.82■■■□□ 2.04
CGREF1-207ENST00000440612 PRAMEF1O95521 474 aa27.82■■■□□ 2.04
CGREF1-207ENST00000440612 DRD3P35462 400 aa27.82■■■□□ 2.04
CGREF1-207ENST00000440612 POLD2P49005 469 aa27.82■■■□□ 2.04
CGREF1-207ENST00000440612 CLCN5P51795 746 aa27.82■■■□□ 2.04
CGREF1-207ENST00000440612 WDR4P57081 412 aaKnown RBP27.82■■■□□ 2.04
CGREF1-207ENST00000440612 ZKSCAN8Q15776 578 aaPredicted RBP27.82■■■□□ 2.04
CGREF1-207ENST00000440612 ZRANB3Q5FWF4 1079 aa27.82■■■□□ 2.04
CGREF1-207ENST00000440612 ERN2Q76MJ5 926 aaKnown RBP27.82■■■□□ 2.04
CGREF1-207ENST00000440612 SLC41A1Q8IVJ1 513 aa27.82■■■□□ 2.04
CGREF1-207ENST00000440612 CEP97Q8IW35 865 aa27.82■■■□□ 2.04
CGREF1-207ENST00000440612 PPP1R16AQ96I34 528 aa27.82■■■□□ 2.04
CGREF1-207ENST00000440612 NDNQ99608 321 aa27.82■■■□□ 2.04
CGREF1-207ENST00000440612 APPL1Q9UKG1 709 aa27.82■■■□□ 2.04
CGREF1-207ENST00000440612 DUSP12Q9UNI6 340 aa27.82■■■□□ 2.04
CGREF1-207ENST00000440612 CRYL1Q9Y2S2 319 aa27.82■■■□□ 2.04
CGREF1-207ENST00000440612 GLYATL1P3A0A0U1RQE8 302 aa27.81■■■□□ 2.04
CGREF1-207ENST00000440612 COL9A1P20849 921 aa27.81■■■□□ 2.04
CGREF1-207ENST00000440612 CD72P21854 359 aa27.81■■■□□ 2.04
CGREF1-207ENST00000440612 XPAP23025 273 aaPredicted RBP27.81■■■□□ 2.04
CGREF1-207ENST00000440612 TYK2P29597 1187 aa27.81■■■□□ 2.04
CGREF1-207ENST00000440612 P2RY2P41231 377 aa27.81■■■□□ 2.04
CGREF1-207ENST00000440612 TAS2R39P59534 338 aa27.81■■■□□ 2.04
CGREF1-207ENST00000440612 NFATC2Q13469 925 aa27.81■■■□□ 2.04
CGREF1-207ENST00000440612 ARHGEF7Q14155 803 aa27.81■■■□□ 2.04
CGREF1-207ENST00000440612 CHRNA6Q15825 494 aa27.81■■■□□ 2.04
CGREF1-207ENST00000440612 CST6Q15828 149 aa27.81■■■□□ 2.04
CGREF1-207ENST00000440612 TTC19Q6DKK2 380 aaPredicted RBP27.81■■■□□ 2.04
CGREF1-207ENST00000440612 LIPIQ6XZB0 460 aa27.81■■■□□ 2.04
CGREF1-207ENST00000440612 AADATQ8N5Z0 425 aa27.81■■■□□ 2.04
CGREF1-207ENST00000440612 ANKRD42Q8N9B4 389 aa27.81■■■□□ 2.04
CGREF1-207ENST00000440612 TXNDC5Q8NBS9 432 aaKnown RBP27.81■■■□□ 2.04
CGREF1-207ENST00000440612 TCP10LQ8TDR4 215 aa27.81■■■□□ 2.04
CGREF1-207ENST00000440612 FAM3CQ92520 227 aa27.81■■■□□ 2.04
CGREF1-207ENST00000440612 PLEKHG4BQ96PX9 1271 aa27.81■■■□□ 2.04
CGREF1-207ENST00000440612 OLFM1Q99784 485 aa27.81■■■□□ 2.04
CGREF1-207ENST00000440612 KLF8O95600 359 aaPredicted RBP27.81■■■□□ 2.04
CGREF1-207ENST00000440612 SUOXP51687 545 aa27.81■■■□□ 2.04
CGREF1-207ENST00000440612 MRPS21P82921 87 aaKnown RBP27.81■■■□□ 2.04
CGREF1-207ENST00000440612 TIAL1Q01085 375 aaKnown RBP eCLIP27.81■■■□□ 2.04
CGREF1-207ENST00000440612 CNTN1Q12860 1018 aa27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms