RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 GSC2O15499 205 aa11.74□□□□□ -0.53
SMAD3-202ENST00000439724 CLASP2O75122 1294 aaKnown RBP11.74□□□□□ -0.53
SMAD3-202ENST00000439724 XYLBO75191 536 aa11.74□□□□□ -0.53
SMAD3-202ENST00000439724 RHOBTB1O94844 696 aa11.74□□□□□ -0.53
SMAD3-202ENST00000439724 TRBC1P01850 177 aa11.74□□□□□ -0.53
SMAD3-202ENST00000439724 RB1P06400 928 aa11.74□□□□□ -0.53
SMAD3-202ENST00000439724 SRCP12931 536 aa11.74□□□□□ -0.53
SMAD3-202ENST00000439724 PKMP14618 531 aaKnown RBP11.74□□□□□ -0.53
SMAD3-202ENST00000439724 EN2P19622 333 aaPredicted RBP11.74□□□□□ -0.53
SMAD3-202ENST00000439724 KCNA5P22460 613 aa11.74□□□□□ -0.53
SMAD3-202ENST00000439724 SP100P23497 879 aaPredicted RBP11.74□□□□□ -0.53
SMAD3-202ENST00000439724 PRDX6P30041 224 aa11.74□□□□□ -0.53
SMAD3-202ENST00000439724 HLA-FP30511 346 aa11.74□□□□□ -0.53
SMAD3-202ENST00000439724 FMO4P31512 558 aa11.74□□□□□ -0.53
SMAD3-202ENST00000439724 ADARP55265 1226 aaKnown RBP11.74□□□□□ -0.53
SMAD3-202ENST00000439724 CACNG1Q06432 222 aa11.74□□□□□ -0.53
SMAD3-202ENST00000439724 SETMARQ53H47 684 aaPredicted RBP11.74□□□□□ -0.53
SMAD3-202ENST00000439724 PRSS36Q5K4E3 855 aa11.74□□□□□ -0.53
SMAD3-202ENST00000439724 LYSMD3Q7Z3D4 306 aa11.74□□□□□ -0.53
SMAD3-202ENST00000439724 TMPRSS6Q8IU80 811 aa11.74□□□□□ -0.53
SMAD3-202ENST00000439724 CAMK1DQ8IU85 385 aa11.74□□□□□ -0.53
SMAD3-202ENST00000439724 SUGP1Q8IWZ8 645 aaKnown RBP11.74□□□□□ -0.53
SMAD3-202ENST00000439724 PIANPQ8IYJ0 282 aa11.74□□□□□ -0.53
SMAD3-202ENST00000439724 STK40Q8N2I9 435 aa11.74□□□□□ -0.53
SMAD3-202ENST00000439724 KDM1BQ8NB78 822 aa11.74□□□□□ -0.53
SMAD3-202ENST00000439724 OR2AP1Q8NGE2 309 aa11.74□□□□□ -0.53
SMAD3-202ENST00000439724 RIN3Q8TB24 985 aa11.74□□□□□ -0.53
SMAD3-202ENST00000439724 MOCOSQ96EN8 888 aa11.74□□□□□ -0.53
SMAD3-202ENST00000439724 BIRC8Q96P09 236 aa11.74□□□□□ -0.53
SMAD3-202ENST00000439724 TUBGCP5Q96RT8 1024 aa11.74□□□□□ -0.53
SMAD3-202ENST00000439724 C17orf80Q9BSJ5 609 aa11.74□□□□□ -0.53
SMAD3-202ENST00000439724 TRMOQ9BU70 441 aa11.74□□□□□ -0.53
SMAD3-202ENST00000439724 CCDC28BQ9BUN5 200 aa11.74□□□□□ -0.53
SMAD3-202ENST00000439724 GPR63Q9BZJ6 419 aa11.74□□□□□ -0.53
SMAD3-202ENST00000439724 DERL2Q9GZP9 239 aa11.74□□□□□ -0.53
SMAD3-202ENST00000439724 MTIF3Q9H2K0 278 aaKnown RBP11.74□□□□□ -0.53
SMAD3-202ENST00000439724 ATP13A3Q9H7F0 1226 aa11.74□□□□□ -0.53
SMAD3-202ENST00000439724 ACSS2Q9NR19 701 aa11.74□□□□□ -0.53
SMAD3-202ENST00000439724 TDP1Q9NUW8 608 aa11.74□□□□□ -0.53
SMAD3-202ENST00000439724 TBC1D14Q9P2M4 693 aa11.74□□□□□ -0.53
SMAD3-202ENST00000439724 MTF2Q9Y483 593 aaPredicted RBP11.74□□□□□ -0.53
SMAD3-202ENST00000439724 CCDC189A1A4V9 331 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 CAPN8A6NHC0 703 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 B2RBV5 119 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 GRM6O15303 877 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 SMIM24O75264 130 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 VPS26AO75436 327 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 CSPG5O95196 566 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 PRAMEF12O95522 483 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 PYGLP06737 847 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 ALPIP09923 528 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 CTPS1P17812 591 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 IMPDH1P20839 514 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 SERPINA4P29622 427 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 IRS1P35568 1242 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 CDKN1CP49918 316 aaPredicted RBP11.73□□□□□ -0.53
SMAD3-202ENST00000439724 ATP6V0D1P61421 351 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 SNRPD1P62314 119 aaKnown RBP11.73□□□□□ -0.53
SMAD3-202ENST00000439724 RAD51Q06609 339 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 CAMK1Q14012 370 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 DMC1Q14565 340 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 PTPRRQ15256 657 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 ZNF77Q15935 545 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 PTPRNQ16849 979 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 SLC5A9Q2M3M2 681 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 FUT11Q495W5 492 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 DNAL1Q4LDG9 190 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 ZRANB3Q5FWF4 1079 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 DGKKQ5KSL6 1271 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 WASHC2DQ5SRD0 308 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 C22orf39Q6P5X5 142 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 FRMD7Q6ZUT3 714 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 ACAD11Q709F0 780 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 SPNS2Q8IVW8 549 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 C7orf61Q8IZ16 206 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 OR6K2Q8NGY2 324 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 AGR3Q8TD06 166 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 MICAL1Q8TDZ2 1067 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.73□□□□□ -0.532e-6■■■■■ 37.9
SMAD3-202ENST00000439724 EID2BQ96D98 161 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 FAR2Q96K12 515 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 LYSMD1Q96S90 227 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 ATOH8Q96SQ7 321 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 CEP44Q9C0F1 390 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 C1orf21Q9H246 121 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 GSTO2Q9H4Y5 243 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 EML4Q9HC35 981 aaKnown RBP11.73□□□□□ -0.53
SMAD3-202ENST00000439724 CYP4F12Q9HCS2 524 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 BPIFA1Q9NP55 256 aa11.73□□□□□ -0.53
SMAD3-202ENST00000439724 TRPC5OSA6NMA1 111 aa11.72□□□□□ -0.53
SMAD3-202ENST00000439724 CHUKO15111 745 aa11.72□□□□□ -0.53
SMAD3-202ENST00000439724 SLC22A2O15244 555 aa11.72□□□□□ -0.53
SMAD3-202ENST00000439724 MAGEC1O60732 1142 aa11.72□□□□□ -0.53
SMAD3-202ENST00000439724 ESR1P03372 595 aa11.72□□□□□ -0.53
SMAD3-202ENST00000439724 TPBGLP0DKB5 382 aa11.72□□□□□ -0.53
SMAD3-202ENST00000439724 PABPC1P11940 636 aaKnown RBP11.72□□□□□ -0.53
SMAD3-202ENST00000439724 EPCAMP16422 314 aa11.72□□□□□ -0.53
SMAD3-202ENST00000439724 PTGER3P43115 390 aa11.72□□□□□ -0.53
SMAD3-202ENST00000439724 CTSOP43234 321 aaPredicted RBP11.72□□□□□ -0.53
SMAD3-202ENST00000439724 CPA2P48052 419 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms