RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 ARNT2Q9HBZ2 717 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 PAK5Q9P286 719 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 SPASTQ9UBP0 616 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 CD84Q9UIB8 345 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 SHOC2Q9UQ13 582 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 SPO11Q9Y5K1 396 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 CSNK1G3Q9Y6M4 447 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 CEP250Q9BV73 2442 aa11.78□□□□□ -0.52
HSPG2-206ENST00000439717 TP53BP1Q12888 1972 aaPredicted RBP11.78□□□□□ -0.52
HSPG2-206ENST00000439717 ERI2A8K979 691 aaKnown RBP11.77□□□□□ -0.53
HSPG2-206ENST00000439717 PPFIA2O75334 1257 aa11.77□□□□□ -0.53
HSPG2-206ENST00000439717 RASGRP1O95267 797 aa11.77□□□□□ -0.53
HSPG2-206ENST00000439717 AP2A1O95782 977 aa11.77□□□□□ -0.53
HSPG2-206ENST00000439717 SOD1P00441 154 aa11.77□□□□□ -0.53
HSPG2-206ENST00000439717 SRP54P61011 504 aaKnown RBP11.77□□□□□ -0.53
HSPG2-206ENST00000439717 CDK3Q00526 305 aa11.77□□□□□ -0.53
HSPG2-206ENST00000439717 ZNF542PQ5EBM4 170 aa11.77□□□□□ -0.53
HSPG2-206ENST00000439717 PPM1JQ5JR12 505 aa11.77□□□□□ -0.53
HSPG2-206ENST00000439717 HENMT1Q5T8I9 393 aaKnown RBP11.77□□□□□ -0.53
HSPG2-206ENST00000439717 FAXCQ5TGI0 409 aa11.77□□□□□ -0.53
HSPG2-206ENST00000439717 ZDHHC20Q5W0Z9 365 aa11.77□□□□□ -0.53
HSPG2-206ENST00000439717 PDPK2PQ6A1A2 396 aa11.77□□□□□ -0.53
HSPG2-206ENST00000439717 PSAPL1Q6NUJ1 521 aa11.77□□□□□ -0.53
HSPG2-206ENST00000439717 GLT6D1Q7Z4J2 308 aa11.77□□□□□ -0.53
HSPG2-206ENST00000439717 GLRX5Q86SX6 157 aa11.77□□□□□ -0.53
HSPG2-206ENST00000439717 PHACTR4Q8IZ21 702 aa11.77□□□□□ -0.53
HSPG2-206ENST00000439717 PELI3Q8N2H9 469 aa11.77□□□□□ -0.53
HSPG2-206ENST00000439717 SDR16C5Q8N3Y7 309 aa11.77□□□□□ -0.53
HSPG2-206ENST00000439717 SLC25A45Q8N413 288 aa11.77□□□□□ -0.53
HSPG2-206ENST00000439717 TTC30BQ8N4P2 665 aa11.77□□□□□ -0.53
HSPG2-206ENST00000439717 OR56A4Q8NGH8 313 aa11.77□□□□□ -0.53
HSPG2-206ENST00000439717 BAHD1Q8TBE0 780 aaPredicted RBP11.77□□□□□ -0.53
HSPG2-206ENST00000439717 DTX3LQ8TDB6 740 aa11.77□□□□□ -0.53
HSPG2-206ENST00000439717 BLOC1S5Q8TDH9 187 aa11.77□□□□□ -0.53
HSPG2-206ENST00000439717 COG1Q8WTW3 980 aa11.77□□□□□ -0.53
HSPG2-206ENST00000439717 SCAMP4Q969E2 229 aa11.77□□□□□ -0.53
HSPG2-206ENST00000439717 CAMK1GQ96NX5 476 aa11.77□□□□□ -0.53
HSPG2-206ENST00000439717 WDR24Q96S15 920 aa11.77□□□□□ -0.53
HSPG2-206ENST00000439717 RIOK2Q9BVS4 552 aaKnown RBP11.77□□□□□ -0.53
HSPG2-206ENST00000439717 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.77□□□□□ -0.53
HSPG2-206ENST00000439717 KLQ9UEF7 1012 aa11.77□□□□□ -0.53
HSPG2-206ENST00000439717 APOBEC3BQ9UH17 382 aaKnown RBP11.77□□□□□ -0.53
HSPG2-206ENST00000439717 KLF15Q9UIH9 416 aa11.77□□□□□ -0.53
HSPG2-206ENST00000439717 DGKBQ9Y6T7 804 aa11.77□□□□□ -0.53
HSPG2-206ENST00000439717 DNAH14Q0VDD8 3507 aa11.77□□□□□ -0.53
HSPG2-206ENST00000439717 GOLGA6L10A0A0M3HER8 536 aa11.76□□□□□ -0.53
HSPG2-206ENST00000439717 CTAGE9A4FU28 777 aa11.76□□□□□ -0.53
HSPG2-206ENST00000439717 TMEM202A6NGA9 273 aa11.76□□□□□ -0.53
HSPG2-206ENST00000439717 SCAMP1O15126 338 aa11.76□□□□□ -0.53
HSPG2-206ENST00000439717 AQP9O43315 295 aa11.76□□□□□ -0.53
HSPG2-206ENST00000439717 SDC3O75056 442 aa11.76□□□□□ -0.53
HSPG2-206ENST00000439717 TNFP01375 233 aa11.76□□□□□ -0.53
HSPG2-206ENST00000439717 ALPPL2P10696 532 aa11.76□□□□□ -0.53
HSPG2-206ENST00000439717 HK3P52790 923 aa11.76□□□□□ -0.53
HSPG2-206ENST00000439717 PDE1BQ01064 536 aa11.76□□□□□ -0.53
HSPG2-206ENST00000439717 TAF1AQ15573 450 aaPredicted RBP11.76□□□□□ -0.53
HSPG2-206ENST00000439717 TRIP6Q15654 476 aaKnown RBP11.76□□□□□ -0.53
HSPG2-206ENST00000439717 CYP1B1Q16678 543 aa11.76□□□□□ -0.53
HSPG2-206ENST00000439717 ALG11Q2TAA5 492 aa11.76□□□□□ -0.53
HSPG2-206ENST00000439717 HS1BP3Q53T59 392 aa11.76□□□□□ -0.53
HSPG2-206ENST00000439717 PAPD7Q5XG87 772 aaKnown RBP11.76□□□□□ -0.53
HSPG2-206ENST00000439717 DENND5AQ6IQ26 1287 aa11.76□□□□□ -0.53
HSPG2-206ENST00000439717 GSTA5Q7RTV2 222 aa11.76□□□□□ -0.53
HSPG2-206ENST00000439717 LINC00523Q86TU6 105 aa11.76□□□□□ -0.53
HSPG2-206ENST00000439717 FSTL5Q8N475 847 aaPredicted RBP11.76□□□□□ -0.53
HSPG2-206ENST00000439717 TRAM1L1Q8N609 369 aa11.76□□□□□ -0.53
HSPG2-206ENST00000439717 EID2Q8N6I1 236 aa11.76□□□□□ -0.53
HSPG2-206ENST00000439717 PDCD7Q8N8D1 485 aaKnown RBP11.76□□□□□ -0.53
HSPG2-206ENST00000439717 ZNF548Q8NEK5 533 aaPredicted RBP11.76□□□□□ -0.53
HSPG2-206ENST00000439717 BRSK1Q8TDC3 778 aa11.76□□□□□ -0.53
HSPG2-206ENST00000439717 COX14Q96I36 57 aa11.76□□□□□ -0.53
HSPG2-206ENST00000439717 HIC2Q96JB3 615 aa11.76□□□□□ -0.53
HSPG2-206ENST00000439717 PLEKHG4BQ96PX9 1271 aa11.76□□□□□ -0.53
HSPG2-206ENST00000439717 NAPGQ99747 312 aaPredicted RBP11.76□□□□□ -0.53
HSPG2-206ENST00000439717 C19orf43Q9BQ61 176 aa11.76□□□□□ -0.53
HSPG2-206ENST00000439717 APOL2Q9BQE5 337 aa11.76□□□□□ -0.53
HSPG2-206ENST00000439717 ZSCAN5AQ9BUG6 496 aa11.76□□□□□ -0.53
HSPG2-206ENST00000439717 DUSP23Q9BVJ7 150 aa11.76□□□□□ -0.53
HSPG2-206ENST00000439717 LGR4Q9BXB1 951 aa11.76□□□□□ -0.53
HSPG2-206ENST00000439717 FRMD8Q9BZ67 464 aaPredicted RBP11.76□□□□□ -0.53
HSPG2-206ENST00000439717 ETNK1Q9HBU6 452 aa11.76□□□□□ -0.53
HSPG2-206ENST00000439717 NLGN3Q9NZ94 848 aa11.76□□□□□ -0.53
HSPG2-206ENST00000439717 PNMA8BQ9ULN7 279 aaPredicted RBP11.76□□□□□ -0.53
HSPG2-206ENST00000439717 SLC17A4Q9Y2C5 497 aa11.76□□□□□ -0.53
HSPG2-206ENST00000439717 BTBD3Q9Y2F9 522 aa11.76□□□□□ -0.53
HSPG2-206ENST00000439717 PKP3Q9Y446 797 aa11.76□□□□□ -0.53
HSPG2-206ENST00000439717 DCHS1Q96JQ0 3298 aa11.76□□□□□ -0.53
HSPG2-206ENST00000439717 ASCC3Q8N3C0 2202 aaKnown RBP11.75□□□□□ -0.53
HSPG2-206ENST00000439717 C2orf81A6NN90 581 aa11.75□□□□□ -0.53
HSPG2-206ENST00000439717 E7EVH7 732 aa11.75□□□□□ -0.53
HSPG2-206ENST00000439717 TPP1O14773 563 aa11.75□□□□□ -0.53
HSPG2-206ENST00000439717 AURKAO14965 403 aa11.75□□□□□ -0.53
HSPG2-206ENST00000439717 TNFSF14O43557 240 aa11.75□□□□□ -0.53
HSPG2-206ENST00000439717 USP12O75317 370 aa11.75□□□□□ -0.53
HSPG2-206ENST00000439717 SUN1O94901 812 aa11.75□□□□□ -0.53
HSPG2-206ENST00000439717 CRTAMO95727 393 aa11.75□□□□□ -0.53
HSPG2-206ENST00000439717 LDOC1O95751 146 aaPredicted RBP11.75□□□□□ -0.53
HSPG2-206ENST00000439717 SLC4A1P02730 911 aa11.75□□□□□ -0.53
HSPG2-206ENST00000439717 CTSEP14091 401 aa11.75□□□□□ -0.53
HSPG2-206ENST00000439717 BPIP17213 487 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms