RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 ARL14Q8N4G2 192 aa11.45□□□□□ -0.58
IRF1-204ENST00000439555 KIAA1524Q8TCG1 905 aa11.45□□□□□ -0.58
IRF1-204ENST00000439555 CCDC74AQ96AQ1 378 aa11.45□□□□□ -0.58
IRF1-204ENST00000439555 TMEM159Q96B96 161 aa11.45□□□□□ -0.58
IRF1-204ENST00000439555 HDAC11Q96DB2 347 aa11.45□□□□□ -0.58
IRF1-204ENST00000439555 SCARF2Q96GP6 870 aaPredicted RBP11.45□□□□□ -0.58
IRF1-204ENST00000439555 PRR11Q96HE9 360 aaPredicted RBP11.45□□□□□ -0.58
IRF1-204ENST00000439555 TMEM74Q96NL1 305 aa11.45□□□□□ -0.58
IRF1-204ENST00000439555 GFM1Q96RP9 751 aaKnown RBP11.45□□□□□ -0.58
IRF1-204ENST00000439555 LYSMD1Q96S90 227 aa11.45□□□□□ -0.58
IRF1-204ENST00000439555 CCNL2Q96S94 520 aaPredicted RBP11.45□□□□□ -0.58
IRF1-204ENST00000439555 FRMD8Q9BZ67 464 aaPredicted RBP11.45□□□□□ -0.58
IRF1-204ENST00000439555 TMEM168Q9H0V1 697 aa11.45□□□□□ -0.58
IRF1-204ENST00000439555 LRRN3Q9H3W5 708 aa11.45□□□□□ -0.58
IRF1-204ENST00000439555 CYP4F12Q9HCS2 524 aa11.45□□□□□ -0.58
IRF1-204ENST00000439555 RBM22Q9NW64 420 aaKnown RBP eCLIP11.45□□□□□ -0.58
IRF1-204ENST00000439555 SIRPGQ9P1W8 387 aa11.45□□□□□ -0.58
IRF1-204ENST00000439555 ANKMY1Q9P2S6 941 aa11.45□□□□□ -0.58
IRF1-204ENST00000439555 SATB2Q9UPW6 733 aa11.45□□□□□ -0.58
IRF1-204ENST00000439555 SLC17A4Q9Y2C5 497 aa11.45□□□□□ -0.58
IRF1-204ENST00000439555 FLNCQ14315 2725 aa11.45□□□□□ -0.58
IRF1-204ENST00000439555 A0A0J9YYE9 177 aa11.44□□□□□ -0.58
IRF1-204ENST00000439555 A0A1W2PQM1 296 aa11.44□□□□□ -0.58
IRF1-204ENST00000439555 D6RAR5 112 aa11.44□□□□□ -0.58
IRF1-204ENST00000439555 ZW10O43264 779 aa11.44□□□□□ -0.58
IRF1-204ENST00000439555 AKR1B10O60218 316 aa11.44□□□□□ -0.58
IRF1-204ENST00000439555 NOBOXO60393 691 aa11.44□□□□□ -0.58
IRF1-204ENST00000439555 MTA2O94776 668 aa11.44□□□□□ -0.58
IRF1-204ENST00000439555 TRBC1P01850 177 aa11.44□□□□□ -0.58
IRF1-204ENST00000439555 IVLP07476 585 aa11.44□□□□□ -0.58
IRF1-204ENST00000439555 ITGA2BP08514 1039 aa11.44□□□□□ -0.58
IRF1-204ENST00000439555 PDHA1P08559 390 aa11.44□□□□□ -0.58
IRF1-204ENST00000439555 ETV3P41162 512 aa11.44□□□□□ -0.58
IRF1-204ENST00000439555 TAS2R40P59535 323 aa11.44□□□□□ -0.58
IRF1-204ENST00000439555 PTSQ03393 145 aa11.44□□□□□ -0.58
IRF1-204ENST00000439555 ILF3Q12906 894 aaKnown RBP eCLIP11.44□□□□□ -0.58
IRF1-204ENST00000439555 HLTFQ14527 1009 aaKnown RBP eCLIP11.44□□□□□ -0.58
IRF1-204ENST00000439555 TCEAL1Q15170 157 aa11.44□□□□□ -0.58
IRF1-204ENST00000439555 CLPPQ16740 277 aaPredicted RBP11.44□□□□□ -0.58
IRF1-204ENST00000439555 C14orf28Q4W4Y0 310 aa11.44□□□□□ -0.58
IRF1-204ENST00000439555 C3orf38Q5JPI3 329 aa11.44□□□□□ -0.58
IRF1-204ENST00000439555 LRRC38Q5VT99 294 aa11.44□□□□□ -0.58
IRF1-204ENST00000439555 CRTC1Q6UUV9 634 aa11.44□□□□□ -0.58
IRF1-204ENST00000439555 ADAMTSL4Q6UY14 1074 aa11.44□□□□□ -0.58
IRF1-204ENST00000439555 RHOT2Q8IXI1 618 aa11.44□□□□□ -0.58
IRF1-204ENST00000439555 NRSN1Q8IZ57 195 aa11.44□□□□□ -0.58
IRF1-204ENST00000439555 PELI3Q8N2H9 469 aa11.44□□□□□ -0.58
IRF1-204ENST00000439555 PQLC3Q8N755 202 aa11.44□□□□□ -0.58
IRF1-204ENST00000439555 ARRDC2Q8TBH0 407 aa11.44□□□□□ -0.58
IRF1-204ENST00000439555 RNF157Q96PX1 679 aa11.44□□□□□ -0.58
IRF1-204ENST00000439555 PACSIN1Q9BY11 444 aa11.44□□□□□ -0.58
IRF1-204ENST00000439555 GSDMCQ9BYG8 508 aa11.44□□□□□ -0.58
IRF1-204ENST00000439555 STRADBQ9C0K7 418 aa11.44□□□□□ -0.58
IRF1-204ENST00000439555 DPEP2Q9H4A9 486 aa11.44□□□□□ -0.58
IRF1-204ENST00000439555 DEF6Q9H4E7 631 aa11.44□□□□□ -0.58
IRF1-204ENST00000439555 MRPL40Q9NQ50 206 aaKnown RBP11.44□□□□□ -0.58
IRF1-204ENST00000439555 RABGEF1Q9UJ41 708 aa11.44□□□□□ -0.58
IRF1-204ENST00000439555 PCDHGA7Q9Y5G6 932 aa11.44□□□□□ -0.58
IRF1-204ENST00000439555 RGSL1A5PLK6 1076 aa11.43□□□□□ -0.58
IRF1-204ENST00000439555 PLD2O14939 933 aa11.43□□□□□ -0.58
IRF1-204ENST00000439555 PRLP01236 227 aa11.43□□□□□ -0.58
IRF1-204ENST00000439555 FUCA1P04066 466 aa11.43□□□□□ -0.58
IRF1-204ENST00000439555 RPLP0P05388 317 aaKnown RBP11.43□□□□□ -0.58
IRF1-204ENST00000439555 KDELR1P24390 212 aa11.43□□□□□ -0.58
IRF1-204ENST00000439555 SLC1A1P43005 524 aa11.43□□□□□ -0.58
IRF1-204ENST00000439555 STC1P52823 247 aa11.43□□□□□ -0.58
IRF1-204ENST00000439555 EPHB1P54762 984 aa11.43□□□□□ -0.58
IRF1-204ENST00000439555 CCL7P80098 99 aa11.43□□□□□ -0.58
IRF1-204ENST00000439555 GBE1Q04446 702 aa11.43□□□□□ -0.58
IRF1-204ENST00000439555 ZFP36L1Q07352 338 aaKnown RBP11.43□□□□□ -0.58
IRF1-204ENST00000439555 PPIDQ08752 370 aaKnown RBP11.43□□□□□ -0.58
IRF1-204ENST00000439555 ITKQ08881 620 aa11.43□□□□□ -0.58
IRF1-204ENST00000439555 SLC10A2Q12908 348 aaPredicted RBP11.43□□□□□ -0.58
IRF1-204ENST00000439555 CLN3Q13286 438 aa11.43□□□□□ -0.58
IRF1-204ENST00000439555 UBAP2LQ14157 1087 aaKnown RBP11.43□□□□□ -0.58
IRF1-204ENST00000439555 NR1D2Q14995 579 aa11.43□□□□□ -0.58
IRF1-204ENST00000439555 LRRC66Q68CR7 880 aa11.43□□□□□ -0.58
IRF1-204ENST00000439555 NYAP1Q6ZVC0 841 aa11.43□□□□□ -0.58
IRF1-204ENST00000439555 ZNF438Q7Z4V0 828 aa11.43□□□□□ -0.58
IRF1-204ENST00000439555 TSPAN33Q86UF1 283 aa11.43□□□□□ -0.58
IRF1-204ENST00000439555 CCNJLQ8IV13 435 aa11.43□□□□□ -0.58
IRF1-204ENST00000439555 VSTM4Q8IW00 320 aa11.43□□□□□ -0.58
IRF1-204ENST00000439555 SLC35G2Q8TBE7 412 aa11.43□□□□□ -0.58
IRF1-204ENST00000439555 RAPGEF5Q92565 580 aa11.43□□□□□ -0.58
IRF1-204ENST00000439555 AP2M1Q96CW1 435 aa11.43□□□□□ -0.58
IRF1-204ENST00000439555 CCDC42Q96M95 316 aa11.43□□□□□ -0.58
IRF1-204ENST00000439555 ZNF830Q96NB3 372 aaPredicted RBP11.43□□□□□ -0.58
IRF1-204ENST00000439555 TDRD1Q9BXT4 1180 aaKnown RBP11.43□□□□□ -0.58
IRF1-204ENST00000439555 BRD8Q9H0E9 1235 aa11.43□□□□□ -0.58
IRF1-204ENST00000439555 CARS2Q9HA77 564 aaKnown RBP11.43□□□□□ -0.58
IRF1-204ENST00000439555 ABHD10Q9NUJ1 306 aa11.43□□□□□ -0.58
IRF1-204ENST00000439555 DTLQ9NZJ0 730 aa11.43□□□□□ -0.58
IRF1-204ENST00000439555 LRIT1Q9P2V4 623 aa11.43□□□□□ -0.58
IRF1-204ENST00000439555 ACSL6Q9UKU0 697 aa11.43□□□□□ -0.58
IRF1-204ENST00000439555 INTUQ9ULD6 942 aa11.43□□□□□ -0.58
IRF1-204ENST00000439555 ATXN7L1Q9ULK2 861 aaPredicted RBP11.43□□□□□ -0.58
IRF1-204ENST00000439555 EFSO43281 561 aa11.42□□□□□ -0.58
IRF1-204ENST00000439555 TNFSF15O95150 251 aa11.42□□□□□ -0.58
IRF1-204ENST00000439555 SOD1P00441 154 aa11.42□□□□□ -0.58
IRF1-204ENST00000439555 FGF1P05230 155 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms