RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 CMTR2Q8IYT2 770 aaKnown RBP8.57□□□□□ -1.04
HPS4-206ENST00000439453 TMCO5AQ8N6Q1 288 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 CENPIQ92674 756 aaPredicted RBP8.57□□□□□ -1.04
HPS4-206ENST00000439453 HPDLQ96IR7 371 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 C11orf84Q9BUA3 381 aaPredicted RBP8.57□□□□□ -1.04
HPS4-206ENST00000439453 MROQ9BYG7 248 aa8.57□□□□□ -1.04
HPS4-206ENST00000439453 IFT80Q9P2H3 777 aaPredicted RBP8.57□□□□□ -1.04
HPS4-206ENST00000439453 AQP12BA6NM10 295 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 M0QZ92 97 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 ACOX3O15254 700 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 CCT8P50990 548 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 INCA1Q0VD86 236 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 PPP1R26Q5T8A7 1209 aaPredicted RBP8.56□□□□□ -1.04
HPS4-206ENST00000439453 SLC41A1Q8IVJ1 513 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 AQP12AQ8IXF9 295 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 SLC45A3Q96JT2 553 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 ALPK1Q96QP1 1244 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 NT5C1AQ9BXI3 368 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 UNKQ9C0B0 810 aaKnown RBP8.56□□□□□ -1.04
HPS4-206ENST00000439453 RHOJQ9H4E5 214 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 PRDM12Q9H4Q4 367 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 FANCEQ9HB96 536 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 CASS4Q9NQ75 786 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 KLHL8Q9P2G9 620 aaPredicted RBP8.56□□□□□ -1.04
HPS4-206ENST00000439453 PSME2Q9UL46 239 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 TSC2P49815 1807 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 ZBBXA8MT70 800 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 EI24O14681 340 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 KCNH1O95259 989 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 AP2A1O95782 977 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 PSMA4P25789 261 aaKnown RBP8.56□□□□□ -1.04
HPS4-206ENST00000439453 NFKBIAP25963 317 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 CYBRD1Q53TN4 286 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 CCNYL2Q5T2Q4 361 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 TMTC4Q5T4D3 741 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 Q7L0L9 218 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 PIWIL4Q7Z3Z4 852 aaKnown RBP8.56□□□□□ -1.04
HPS4-206ENST00000439453 SPATA6LQ8N4H0 392 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 TXNDC5Q8NBS9 432 aaKnown RBP8.56□□□□□ -1.04
HPS4-206ENST00000439453 OR9I1Q8NGQ6 314 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 PNPT1Q8TCS8 783 aaKnown RBP8.56□□□□□ -1.04
HPS4-206ENST00000439453 SNX19Q92543 992 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 NXNL1Q96CM4 212 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 ADAM2Q99965 735 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 OSBPL2Q9H1P3 480 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 CDT1Q9H211 546 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 SOX17Q9H6I2 414 aaPredicted RBP8.56□□□□□ -1.04
HPS4-206ENST00000439453 MEAF6Q9HAF1 191 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 CHRAC1Q9NRG0 131 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 HCSTQ9UBK5 93 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 ACOT9Q9Y305 439 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 MTF2Q9Y483 593 aaPredicted RBP8.56□□□□□ -1.04
HPS4-206ENST00000439453 GPR182O15218 404 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 EFCAB14O75071 495 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 SEC14L2O76054 403 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 PABPC1P11940 636 aaKnown RBP8.56□□□□□ -1.04
HPS4-206ENST00000439453 JUNBP17275 347 aaPredicted RBP8.56□□□□□ -1.04
HPS4-206ENST00000439453 ZNF460Q14592 562 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 PKDCCQ504Y2 493 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 ZNF773Q6PK81 442 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 FRA10AC1Q70Z53 315 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 SLC26A9Q7LBE3 791 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 SMG8Q8ND04 991 aaKnown RBP8.56□□□□□ -1.04
HPS4-206ENST00000439453 CLEC4CQ8WTT0 213 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 FAR2Q96K12 515 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 GUCD1Q96NT3 240 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 GPR78Q96P69 363 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 ZNF347Q96SE7 839 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 NKX2-4Q9H2Z4 354 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 SNX25Q9H3E2 840 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 POMKQ9H5K3 350 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 GPN2Q9H9Y4 310 aaPredicted RBP8.56□□□□□ -1.04
HPS4-206ENST00000439453 C8orf4Q9NR00 106 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 TBC1D13Q9NVG8 400 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 SMPD3Q9NY59 655 aaPredicted RBP8.56□□□□□ -1.04
HPS4-206ENST00000439453 SCHIP1Q9P0W5 487 aaPredicted RBP8.56□□□□□ -1.04
HPS4-206ENST00000439453 RAD54BQ9Y620 910 aa8.56□□□□□ -1.04
HPS4-206ENST00000439453 ZNF638Q14966 1978 aaKnown RBP8.55□□□□□ -1.04
HPS4-206ENST00000439453 KCNK1O00180 336 aa8.55□□□□□ -1.04
HPS4-206ENST00000439453 NME4O00746 187 aa8.55□□□□□ -1.04
HPS4-206ENST00000439453 MBL2P11226 248 aaPredicted RBP8.55□□□□□ -1.04
HPS4-206ENST00000439453 ARF4P18085 180 aaPredicted RBP8.55□□□□□ -1.04
HPS4-206ENST00000439453 NMBRP28336 390 aa8.55□□□□□ -1.04
HPS4-206ENST00000439453 IDUAP35475 653 aa8.55□□□□□ -1.04
HPS4-206ENST00000439453 OPRL1P41146 370 aa8.55□□□□□ -1.04
HPS4-206ENST00000439453 ATP6V0D1P61421 351 aa8.55□□□□□ -1.04
HPS4-206ENST00000439453 CDC42EP1Q00587 391 aa8.55□□□□□ -1.04
HPS4-206ENST00000439453 PRPSAP1Q14558 356 aa8.55□□□□□ -1.04
HPS4-206ENST00000439453 PLCL1Q15111 1095 aa8.55□□□□□ -1.04
HPS4-206ENST00000439453 PSMD5Q16401 504 aa8.55□□□□□ -1.04
HPS4-206ENST00000439453 CLLU1OSQ5K130 101 aa8.55□□□□□ -1.04
HPS4-206ENST00000439453 LDLRAP1Q5SW96 308 aa8.55□□□□□ -1.04
HPS4-206ENST00000439453 DDIASQ8IXT1 998 aa8.55□□□□□ -1.04
HPS4-206ENST00000439453 SLC7A5P1Q8MH63 180 aa8.55□□□□□ -1.04
HPS4-206ENST00000439453 CADM3Q8N126 398 aa8.55□□□□□ -1.04
HPS4-206ENST00000439453 AFAP1L2Q8N4X5 818 aa8.55□□□□□ -1.04
HPS4-206ENST00000439453 BPIFB6Q8NFQ5 453 aa8.55□□□□□ -1.04
HPS4-206ENST00000439453 RAB2BQ8WUD1 216 aa8.55□□□□□ -1.04
HPS4-206ENST00000439453 SLC35F5Q8WV83 523 aa8.55□□□□□ -1.04
HPS4-206ENST00000439453 HDAC10Q969S8 669 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms