RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 C1QAP02745 245 aa9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 PSMA4P25789 261 aaKnown RBP9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 CNTFP26441 200 aa9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 PIK3CGP48736 1102 aa9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 CDC42EP1Q00587 391 aa9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 PRKAA1Q13131 559 aa9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 GRB14Q14449 540 aa9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 ZFP1Q6P2D0 407 aa9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 AGMOQ6ZNB7 445 aa9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 ST13P5Q8NFI4 369 aaPredicted RBP9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 OR10T2Q8NGX3 314 aa9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 HEXDCQ8WVB3 486 aa9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 TEKT5Q96M29 485 aa9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 DMRTB1Q96MA1 342 aa9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 PPM1MQ96MI6 270 aa9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 SPAG4Q9NPE6 437 aa9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 CNGB3Q9NQW8 809 aa9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 SMPD4Q9NXE4 827 aa9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 PKD2L2Q9NZM6 624 aa9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 FBXO5Q9UKT4 447 aa9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 INVSQ9Y283 1065 aa9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 RBBP6Q7Z6E9 1792 aaKnown RBP9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 MKI67P46013 3256 aaKnown RBP9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 A0A0C4DFX4 3053 aa9.93□□□□□ -0.82
CDC42SE1-202ENST00000439374 M0R3G1 203 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 SNX2O60749 519 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 CNTN5O94779 1100 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 F9P00740 461 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 CCNA2P20248 432 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 MATN1P21941 496 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 JAK1P23458 1154 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 PSMB9P28065 219 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 MASP1P48740 699 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 NFYCQ13952 458 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 OTUD1Q5VV17 481 aaPredicted RBP9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 DCDC5Q6ZRR9 648 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 GATAD2AQ86YP4 633 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 TTC9BQ8N6N2 239 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 LINC01465Q8N7H1 131 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 TMEM102Q8N9M5 508 aaPredicted RBP9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 SMIM14Q96QK8 99 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 MYOCQ99972 504 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 IL22Q9GZX6 179 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 ZNF696Q9H7X3 374 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 MYO9BQ13459 2157 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 HTR3EA5X5Y0 456 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 DCLK1O15075 740 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 SYNCRIPO60506 623 aaKnown RBP9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 HLA-DQB2P05538 268 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 FSHRP23945 695 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 FASP25445 335 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 SLC1A2P43004 574 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 ADAM17P78536 824 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 SLC10A7Q0GE19 358 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 SPOUT1Q5T280 376 aaKnown RBP9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 LDLRAD1Q5T700 205 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 LIPMQ5VYY2 423 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 GPR180Q86V85 440 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 CHERPQ8IWX8 916 aaKnown RBP9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 UBE2J2Q8N2K1 259 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 FIG4Q92562 907 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 CENPIQ92674 756 aaPredicted RBP9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 MUS81Q96NY9 551 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 KATNAL1Q9BW62 490 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 PRRG3Q9BZD7 231 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 GBA3Q9H227 469 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 SMURF2Q9HAU4 748 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 ZBTB26Q9HCK0 441 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 WDR6Q9NNW5 1121 aaKnown RBP9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 BPIFA1Q9NP55 256 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 MID1IP1Q9NPA3 183 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 SLAMF8Q9P0V8 285 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 SORCS3Q9UPU3 1222 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 COL1A2P08123 1366 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 SNRPB2P08579 225 aaKnown RBP9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 PRSS56P0CW18 603 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 PAMP19021 973 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 OPRL1P41146 370 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 CD151P48509 253 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 NIPAL4Q0D2K0 466 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 ZNF235Q14590 738 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 PFKFB4Q16877 469 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 FAM171A1Q5VUB5 890 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 ADGRG6Q86SQ4 1221 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 ADCK1Q86TW2 530 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 SYTL1Q8IYJ3 562 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 BBS5Q8N3I7 341 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 TRPC4APQ8TEL6 797 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 UPF1Q92900 1129 aaKnown RBP eCLIP9.92□□□□□ -0.821e-6■□□□□ 10.5
CDC42SE1-202ENST00000439374 PSMG2Q969U7 264 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 RTP4Q96DX8 246 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 CCDC68Q9H2F9 335 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 FAM96AQ9H5X1 160 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 RPF2Q9H7B2 306 aaKnown RBP9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 NMUR1Q9HB89 426 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 GDAP2Q9NXN4 497 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 CACNA2D2Q9NY47 1150 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 DERAQ9Y315 318 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 TRPV2Q9Y5S1 764 aa9.92□□□□□ -0.82
CDC42SE1-202ENST00000439374 TRIP12Q14669 1992 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms