RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 MGAT5BQ3V5L5 792 aa10.4□□□□□ -0.74
CLSTN1-203ENST00000435891 MSANTD2Q6P1R3 559 aa10.4□□□□□ -0.74
CLSTN1-203ENST00000435891 AMIGO2Q86SJ2 522 aa10.4□□□□□ -0.74
CLSTN1-203ENST00000435891 LRRC49Q8IUZ0 686 aa10.4□□□□□ -0.74
CLSTN1-203ENST00000435891 ADCY4Q8NFM4 1077 aa10.4□□□□□ -0.74
CLSTN1-203ENST00000435891 TADA1Q96BN2 335 aa10.4□□□□□ -0.74
CLSTN1-203ENST00000435891 RPRD1AQ96P16 312 aaPredicted RBP10.4□□□□□ -0.74
CLSTN1-203ENST00000435891 AKTIPQ9H8T0 292 aa10.4□□□□□ -0.74
CLSTN1-203ENST00000435891 IL1RL2Q9HB29 575 aa10.4□□□□□ -0.74
CLSTN1-203ENST00000435891 UTP6Q9NYH9 597 aaKnown RBP10.4□□□□□ -0.74
CLSTN1-203ENST00000435891 PTTG2Q9NZH5 202 aa10.4□□□□□ -0.74
CLSTN1-203ENST00000435891 HCSTQ9UBK5 93 aa10.4□□□□□ -0.74
CLSTN1-203ENST00000435891 IKZF3Q9UKT9 509 aa10.4□□□□□ -0.74
CLSTN1-203ENST00000435891 TMEM98Q9Y2Y6 226 aa10.4□□□□□ -0.74
CLSTN1-203ENST00000435891 IGLV3-10A0A075B6K4 115 aa10.4□□□□□ -0.75
CLSTN1-203ENST00000435891 A0A0D9SEW6 157 aa10.4□□□□□ -0.75
CLSTN1-203ENST00000435891 ARHGAP10A1A4S6 786 aa10.4□□□□□ -0.75
CLSTN1-203ENST00000435891 MRASO14807 208 aa10.4□□□□□ -0.75
CLSTN1-203ENST00000435891 KPNA6O60684 536 aa10.4□□□□□ -0.75
CLSTN1-203ENST00000435891 CDK14O94921 469 aa10.4□□□□□ -0.75
CLSTN1-203ENST00000435891 PAPSS2O95340 614 aaPredicted RBP10.4□□□□□ -0.75
CLSTN1-203ENST00000435891 CAPNS1P04632 268 aa10.4□□□□□ -0.75
CLSTN1-203ENST00000435891 CHRM3P20309 590 aa10.4□□□□□ -0.75
CLSTN1-203ENST00000435891 GRB7Q14451 532 aa10.4□□□□□ -0.75
CLSTN1-203ENST00000435891 POLD3Q15054 466 aaPredicted RBP10.4□□□□□ -0.75
CLSTN1-203ENST00000435891 IFNL1Q8IU54 200 aa10.4□□□□□ -0.75
CLSTN1-203ENST00000435891 PTGR2Q8N8N7 351 aaPredicted RBP10.4□□□□□ -0.75
CLSTN1-203ENST00000435891 LINC01599Q8WXQ3 324 aa10.4□□□□□ -0.75
CLSTN1-203ENST00000435891 NCSTNQ92542 709 aa10.4□□□□□ -0.75
CLSTN1-203ENST00000435891 SPATA17Q96L03 361 aa10.4□□□□□ -0.75
CLSTN1-203ENST00000435891 DHRS1Q96LJ7 313 aa10.4□□□□□ -0.75
CLSTN1-203ENST00000435891 COQ10BQ9H8M1 238 aa10.4□□□□□ -0.75
CLSTN1-203ENST00000435891 EML4Q9HC35 981 aaKnown RBP10.4□□□□□ -0.75
CLSTN1-203ENST00000435891 CD300AQ9UGN4 299 aa10.4□□□□□ -0.75
CLSTN1-203ENST00000435891 SUN2Q9UH99 717 aa10.4□□□□□ -0.75
CLSTN1-203ENST00000435891 SNRPB2P08579 225 aaKnown RBP10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 CDK4P11802 303 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 ECT2LQ008S8 904 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 STX5Q13190 355 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 MBTPS1Q14703 1052 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 PFKFB4Q16877 469 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 NADSYN1Q6IA69 706 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 DLG3Q92796 817 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 CCDC126Q96EE4 140 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 C19orf60Q96EN9 201 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 TSPAN17Q96FV3 270 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 PPP1R2P1Q96PQ5 205 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 PRPF18Q99633 342 aaKnown RBP10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 SLC29A1Q99808 456 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.39□□□□□ -0.752e-8■■■□□ 14.8
CLSTN1-203ENST00000435891 NDUFA13Q9P0J0 144 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 RAB26Q9ULW5 256 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 AP4S1Q9Y587 144 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 NRP2O60462 931 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 RAMP2O60895 175 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 OAZ2O95190 189 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 SLC2A3P11169 496 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 FDXRP22570 491 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 CCND3P30281 292 aaPredicted RBP10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 SLC7A2P52569 658 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 TAF10Q12962 218 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 CYTH1Q15438 398 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 MTX3Q5HYI7 312 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 VARS2Q5ST30 1063 aaKnown RBP10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 HMBOX1Q6NT76 420 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 KLHDC10Q6PID8 442 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 ZBTB46Q86UZ6 589 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 GRIN3AQ8TCU5 1115 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 SLC35B4Q969S0 331 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 PRICKLE1Q96MT3 831 aaPredicted RBP10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 ZIC5Q96T25 663 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 TUBB1Q9H4B7 451 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 CCSER2Q9H7U1 834 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 LIN28AQ9H9Z2 209 aaKnown RBP10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 INIPQ9NRY2 104 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 SUCOQ9UBS9 1254 aaKnown RBP10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 SARDHQ9UL12 918 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 TRIM17Q9Y577 477 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 VWA8A3KMH1 1905 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 A0A0U1RQS6 177 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 CD3EAPO15446 510 aaKnown RBP10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 GSTT2P0CG29 244 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 GSTT2BP0CG30 244 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 OR1E1P30953 314 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 PSMD8P48556 350 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 KCNQ1P51787 676 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 HERVK_113P63132 956 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 DSC1Q08554 894 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 SERINC3Q13530 473 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 ATP1A4Q13733 1029 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 TRIM71Q2Q1W2 868 aaKnown RBP10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 C10orf120Q5SQS8 335 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 TMEM214Q6NUQ4 689 aaKnown RBP10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 RSPO2Q6UXX9 243 aaPredicted RBP10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 SLC15A3Q8IY34 581 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 EME1Q96AY2 570 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 L3HYPDHQ96EM0 354 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 EXOC2Q96KP1 924 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 UROC1Q96N76 676 aa10.39□□□□□ -0.75
CLSTN1-203ENST00000435891 ERVK-6Q9BXR3 956 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms