RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 PTPN5P54829 565 aa23.14■■□□□ 1.29
SMARCAL1-208ENST00000434435 GPX6P59796 221 aa23.14■■□□□ 1.29
SMARCAL1-208ENST00000434435 PPP2CBP62714 309 aa23.14■■□□□ 1.29
SMARCAL1-208ENST00000434435 PPP2CAP67775 309 aa23.14■■□□□ 1.29
SMARCAL1-208ENST00000434435 FRG1Q14331 258 aaKnown RBP23.14■■□□□ 1.29
SMARCAL1-208ENST00000434435 ALS2CLQ60I27 953 aa23.14■■□□□ 1.29
SMARCAL1-208ENST00000434435 AFTPHQ6ULP2 937 aa23.14■■□□□ 1.29
SMARCAL1-208ENST00000434435 SLC36A4Q6YBV0 504 aa23.14■■□□□ 1.29
SMARCAL1-208ENST00000434435 RFLNAQ6ZTI6 216 aa23.14■■□□□ 1.29
SMARCAL1-208ENST00000434435 C3orf62Q6ZUJ4 267 aa23.14■■□□□ 1.29
SMARCAL1-208ENST00000434435 GPR26Q8NDV2 337 aa23.14■■□□□ 1.29
SMARCAL1-208ENST00000434435 OR6P1Q8NGX9 317 aa23.14■■□□□ 1.29
SMARCAL1-208ENST00000434435 HNRNPLLQ8WVV9 542 aaKnown RBP23.14■■□□□ 1.29
SMARCAL1-208ENST00000434435 HDAC10Q969S8 669 aa23.14■■□□□ 1.29
SMARCAL1-208ENST00000434435 GPR174Q9BXC1 333 aa23.14■■□□□ 1.29
SMARCAL1-208ENST00000434435 C1QTNF7Q9BXJ2 289 aa23.14■■□□□ 1.29
SMARCAL1-208ENST00000434435 APPL1Q9UKG1 709 aa23.14■■□□□ 1.29
SMARCAL1-208ENST00000434435 FNDC3AQ9Y2H6 1198 aaKnown RBP23.14■■□□□ 1.29
SMARCAL1-208ENST00000434435 GLYATL1P3A0A0U1RQE8 302 aa23.13■■□□□ 1.29
SMARCAL1-208ENST00000434435 CCDC162PA2VCL2 907 aa23.13■■□□□ 1.29
SMARCAL1-208ENST00000434435 RIPK2O43353 540 aa23.13■■□□□ 1.29
SMARCAL1-208ENST00000434435 VAPBO95292 243 aa23.13■■□□□ 1.29
SMARCAL1-208ENST00000434435 STX2P32856 288 aa23.13■■□□□ 1.29
SMARCAL1-208ENST00000434435 SGCGQ13326 291 aa23.13■■□□□ 1.29
SMARCAL1-208ENST00000434435 AGERQ15109 404 aa23.13■■□□□ 1.29
SMARCAL1-208ENST00000434435 PDPK2PQ6A1A2 396 aa23.13■■□□□ 1.29
SMARCAL1-208ENST00000434435 FAM151BQ6UXP7 276 aa23.13■■□□□ 1.29
SMARCAL1-208ENST00000434435 ZNF765Q7L2R6 523 aa23.13■■□□□ 1.29
SMARCAL1-208ENST00000434435 MAML2Q8IZL2 1156 aaPredicted RBP23.13■■□□□ 1.29
SMARCAL1-208ENST00000434435 MREGQ8N565 214 aa23.13■■□□□ 1.29
SMARCAL1-208ENST00000434435 FAM160A2Q8N612 972 aaPredicted RBP23.13■■□□□ 1.29
SMARCAL1-208ENST00000434435 UBLCP1Q8WVY7 318 aaPredicted RBP23.13■■□□□ 1.29
SMARCAL1-208ENST00000434435 CERS2Q96G23 380 aa23.13■■□□□ 1.29
SMARCAL1-208ENST00000434435 FAM83DQ9H4H8 585 aa23.13■■□□□ 1.29
SMARCAL1-208ENST00000434435 C20orf96Q9NUD7 363 aaPredicted RBP23.13■■□□□ 1.29
SMARCAL1-208ENST00000434435 CD84Q9UIB8 345 aa23.13■■□□□ 1.29
SMARCAL1-208ENST00000434435 SPAG17Q6Q759 2223 aa23.13■■□□□ 1.29
SMARCAL1-208ENST00000434435 ABHD2P08910 425 aa23.12■■□□□ 1.29
SMARCAL1-208ENST00000434435 H2AFXP16104 143 aaPredicted RBP23.12■■□□□ 1.29
SMARCAL1-208ENST00000434435 MC4RP32245 332 aa23.12■■□□□ 1.29
SMARCAL1-208ENST00000434435 CCR5P51681 352 aa23.12■■□□□ 1.29
SMARCAL1-208ENST00000434435 ZNF284Q2VY69 593 aa23.12■■□□□ 1.29
SMARCAL1-208ENST00000434435 SPDYCQ5MJ68 293 aa23.12■■□□□ 1.29
SMARCAL1-208ENST00000434435 KIAA0895LQ68EN5 471 aa23.12■■□□□ 1.29
SMARCAL1-208ENST00000434435 KCNMB4Q86W47 210 aa23.12■■□□□ 1.29
SMARCAL1-208ENST00000434435 LONP2Q86WA8 852 aa23.12■■□□□ 1.29
SMARCAL1-208ENST00000434435 FRMD1Q8N878 549 aa23.12■■□□□ 1.29
SMARCAL1-208ENST00000434435 ASB12Q8WXK4 309 aa23.12■■□□□ 1.29
SMARCAL1-208ENST00000434435 C1QTNF2Q9BXJ5 285 aa23.12■■□□□ 1.29
SMARCAL1-208ENST00000434435 SLC17A9Q9BYT1 436 aa23.12■■□□□ 1.29
SMARCAL1-208ENST00000434435 PCED1AQ9H1Q7 454 aa23.12■■□□□ 1.29
SMARCAL1-208ENST00000434435 ABCG8Q9H221 673 aa23.12■■□□□ 1.29
SMARCAL1-208ENST00000434435 C6orf106Q9H6K1 298 aaPredicted RBP23.12■■□□□ 1.29
SMARCAL1-208ENST00000434435 SUDS3Q9H7L9 328 aaPredicted RBP23.12■■□□□ 1.29
SMARCAL1-208ENST00000434435 C11orf16Q9NQ32 467 aa23.12■■□□□ 1.29
SMARCAL1-208ENST00000434435 SLC30A1Q9Y6M5 507 aa23.12■■□□□ 1.29
SMARCAL1-208ENST00000434435 MUC3AQ02505 3323 aa23.12■■□□□ 1.29
SMARCAL1-208ENST00000434435 A0A0C4DFX4 3053 aa23.12■■□□□ 1.29
SMARCAL1-208ENST00000434435 TCRBV9S1A1TA0A576 114 aa23.11■■□□□ 1.29
SMARCAL1-208ENST00000434435 PRR33A8MZF0 331 aa23.11■■□□□ 1.29
SMARCAL1-208ENST00000434435 PRAMEF1O95521 474 aa23.11■■□□□ 1.29
SMARCAL1-208ENST00000434435 GOT2P00505 430 aaKnown RBP23.11■■□□□ 1.29
SMARCAL1-208ENST00000434435 ARNTP27540 789 aa23.11■■□□□ 1.29
SMARCAL1-208ENST00000434435 MAT2AP31153 395 aaKnown RBP23.11■■□□□ 1.29
SMARCAL1-208ENST00000434435 ARCN1P48444 511 aaKnown RBP23.11■■□□□ 1.29
SMARCAL1-208ENST00000434435 XIAPP98170 497 aa23.11■■□□□ 1.29
SMARCAL1-208ENST00000434435 PEX6Q13608 980 aa23.11■■□□□ 1.29
SMARCAL1-208ENST00000434435 THOC5Q13769 683 aaKnown RBP23.11■■□□□ 1.29
SMARCAL1-208ENST00000434435 SMAD1Q15797 465 aaKnown RBP23.11■■□□□ 1.29
SMARCAL1-208ENST00000434435 UBAP2Q5T6F2 1119 aaKnown RBP23.11■■□□□ 1.29
SMARCAL1-208ENST00000434435 HENMT1Q5T8I9 393 aaKnown RBP23.11■■□□□ 1.29
SMARCAL1-208ENST00000434435 TRMT10BQ6PF06 316 aaKnown RBP23.11■■□□□ 1.29
SMARCAL1-208ENST00000434435 OR4L1Q8NH43 312 aa23.11■■□□□ 1.29
SMARCAL1-208ENST00000434435 GABPB2Q8TAK5 448 aaPredicted RBP23.11■■□□□ 1.29
SMARCAL1-208ENST00000434435 KLK6Q92876 244 aa23.11■■□□□ 1.29
SMARCAL1-208ENST00000434435 AP2M1Q96CW1 435 aa23.11■■□□□ 1.29
SMARCAL1-208ENST00000434435 FAM126AQ9BYI3 521 aaPredicted RBP23.11■■□□□ 1.29
SMARCAL1-208ENST00000434435 ARFGAP3Q9NP61 516 aa23.11■■□□□ 1.29
SMARCAL1-208ENST00000434435 IL26Q9NPH9 171 aa23.11■■□□□ 1.29
SMARCAL1-208ENST00000434435 PPANQ9NQ55 473 aaKnown RBP23.11■■□□□ 1.29
SMARCAL1-208ENST00000434435 IL1RAPL1Q9NZN1 696 aa23.11■■□□□ 1.29
SMARCAL1-208ENST00000434435 MBD1Q9UIS9 605 aaPredicted RBP23.11■■□□□ 1.29
SMARCAL1-208ENST00000434435 INVSQ9Y283 1065 aa23.11■■□□□ 1.29
SMARCAL1-208ENST00000434435 ABCA7Q8IZY2 2146 aa23.11■■□□□ 1.29
SMARCAL1-208ENST00000434435 A0A087WUV0 522 aaPredicted RBP23.1■■□□□ 1.29
SMARCAL1-208ENST00000434435 SRP72O76094 671 aaKnown RBP23.1■■□□□ 1.29
SMARCAL1-208ENST00000434435 ITGALP20701 1170 aa23.1■■□□□ 1.29
SMARCAL1-208ENST00000434435 HSD17B3P37058 310 aa23.1■■□□□ 1.29
SMARCAL1-208ENST00000434435 DPTQ07507 201 aa23.1■■□□□ 1.29
SMARCAL1-208ENST00000434435 MGAT5Q09328 741 aa23.1■■□□□ 1.29
SMARCAL1-208ENST00000434435 FGL2Q14314 439 aa23.1■■□□□ 1.29
SMARCAL1-208ENST00000434435 UAP1Q16222 522 aaPredicted RBP23.1■■□□□ 1.29
SMARCAL1-208ENST00000434435 SETMARQ53H47 684 aaPredicted RBP23.1■■□□□ 1.29
SMARCAL1-208ENST00000434435 ZRANB3Q5FWF4 1079 aa23.1■■□□□ 1.29
SMARCAL1-208ENST00000434435 BEND6Q5SZJ8 279 aaPredicted RBP23.1■■□□□ 1.29
SMARCAL1-208ENST00000434435 ZNF449Q6P9G9 518 aa23.1■■□□□ 1.29
SMARCAL1-208ENST00000434435 UNC5BQ8IZJ1 945 aa23.1■■□□□ 1.29
SMARCAL1-208ENST00000434435 TRAM1L1Q8N609 369 aa23.1■■□□□ 1.29
SMARCAL1-208ENST00000434435 OTUD6BQ8N6M0 293 aa23.1■■□□□ 1.29
SMARCAL1-208ENST00000434435 CALML6Q8TD86 181 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms